RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
CPSF7-214ENST00000535222 KCPQ6ZWJ8 1503 aa11.33□□□□□ -0.6
CPSF7-214ENST00000535222 NSD2O96028 1365 aa11.32□□□□□ -0.6
CPSF7-214ENST00000535222 TGFB2P61812 414 aa11.32□□□□□ -0.6
CPSF7-214ENST00000535222 CDK19Q9BWU1 502 aa11.32□□□□□ -0.6
CPSF7-214ENST00000535222 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
CPSF7-214ENST00000535222 QRICH2Q9H0J4 1663 aa11.31□□□□□ -0.6
CPSF7-214ENST00000535222 IL2RBP14784 551 aa11.31□□□□□ -0.6
CPSF7-214ENST00000535222 NLRP6P59044 892 aa11.31□□□□□ -0.6
CPSF7-214ENST00000535222 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
CPSF7-214ENST00000535222 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
CPSF7-214ENST00000535222 CCNL1Q9UK58 526 aaPredicted RBP11.31□□□□□ -0.6
CPSF7-214ENST00000535222 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
CPSF7-214ENST00000535222 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
CPSF7-214ENST00000535222 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
CPSF7-214ENST00000535222 ANKRD36BQ8N2N9 1353 aa11.29□□□□□ -0.6
CPSF7-214ENST00000535222 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
CPSF7-214ENST00000535222 LBX1P52954 281 aa11.29□□□□□ -0.6
CPSF7-214ENST00000535222 KIF13BQ9NQT8 1826 aa11.29□□□□□ -0.6
CPSF7-214ENST00000535222 KIAA1551Q9HCM1 1747 aa11.29□□□□□ -0.6
CPSF7-214ENST00000535222 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
CPSF7-214ENST00000535222 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
CPSF7-214ENST00000535222 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
CPSF7-214ENST00000535222 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
CPSF7-214ENST00000535222 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
CPSF7-214ENST00000535222 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
CPSF7-214ENST00000535222 CCDC85CA6NKD9 419 aa11.27□□□□□ -0.61
CPSF7-214ENST00000535222 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-214ENST00000535222 KCNH5Q8NCM2 988 aa11.27□□□□□ -0.61
CPSF7-214ENST00000535222 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
CPSF7-214ENST00000535222 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
CPSF7-214ENST00000535222 ITGAEP38570 1179 aa11.26□□□□□ -0.61
CPSF7-214ENST00000535222 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
CPSF7-214ENST00000535222 ERBB3P21860 1342 aa11.26□□□□□ -0.61
CPSF7-214ENST00000535222 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
CPSF7-214ENST00000535222 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
CPSF7-214ENST00000535222 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
CPSF7-214ENST00000535222 KCNA3P22001 575 aa11.24□□□□□ -0.61
CPSF7-214ENST00000535222 GLTPD2A6NH11 291 aa11.23□□□□□ -0.61
CPSF7-214ENST00000535222 POTECB2RU33 542 aa11.23□□□□□ -0.61
CPSF7-214ENST00000535222 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
CPSF7-214ENST00000535222 RNF181Q9P0P0 153 aa11.23□□□□□ -0.61
CPSF7-214ENST00000535222 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-214ENST00000535222 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
CPSF7-214ENST00000535222 FCHSD2O94868 740 aa11.22□□□□□ -0.61
CPSF7-214ENST00000535222 ADRA2BP18089 450 aa11.22□□□□□ -0.61
CPSF7-214ENST00000535222 ARFGEF1Q9Y6D6 1849 aa11.22□□□□□ -0.61
CPSF7-214ENST00000535222 SBF1O95248 1867 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 A0A0C4DFX4 3053 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 NFAT5O94916 1531 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 USP47Q96K76 1375 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 DPEP1P16444 411 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 SSFA2P28290 1259 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 VEGFBP49765 207 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
CPSF7-214ENST00000535222 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.61
CPSF7-214ENST00000535222 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.62
CPSF7-214ENST00000535222 C5P01031 1676 aa11.2□□□□□ -0.62
CPSF7-214ENST00000535222 NSD3Q9BZ95 1437 aa11.2□□□□□ -0.62
CPSF7-214ENST00000535222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.2□□□□□ -0.62
CPSF7-214ENST00000535222 LOC105371045A0A1W2PR82 267 aa11.2□□□□□ -0.62
CPSF7-214ENST00000535222 DDX54Q8TDD1 881 aaKnown RBP11.2□□□□□ -0.62
CPSF7-214ENST00000535222 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-214ENST00000535222 TAF1LQ8IZX4 1826 aa11.2□□□□□ -0.62
CPSF7-214ENST00000535222 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-214ENST00000535222 TOGARAM1Q9Y4F4 1720 aa11.2□□□□□ -0.62
CPSF7-214ENST00000535222 SMIM5Q71RC9 77 aa11.19□□□□□ -0.62
CPSF7-214ENST00000535222 PASKQ96RG2 1323 aa11.18□□□□□ -0.62
CPSF7-214ENST00000535222 MMP10P09238 476 aa11.18□□□□□ -0.62
CPSF7-214ENST00000535222 MAP2K1Q02750 393 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-214ENST00000535222 UBR3Q6ZT12 1888 aa11.18□□□□□ -0.62
CPSF7-214ENST00000535222 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
CPSF7-214ENST00000535222 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
CPSF7-214ENST00000535222 PIM2Q9P1W9 311 aa11.17□□□□□ -0.62
CPSF7-214ENST00000535222 C4BP0C0L5 1744 aa11.17□□□□□ -0.62
CPSF7-214ENST00000535222 AK7Q96M32 723 aa11.16□□□□□ -0.62
CPSF7-214ENST00000535222 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
CPSF7-214ENST00000535222 CUL9Q8IWT3 2517 aa11.15□□□□□ -0.62
CPSF7-214ENST00000535222 DOT1LQ8TEK3 1739 aa11.15□□□□□ -0.62
CPSF7-214ENST00000535222 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.62
CPSF7-214ENST00000535222 ANKRD24Q8TF21 1146 aa11.15□□□□□ -0.62
CPSF7-214ENST00000535222 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
CPSF7-214ENST00000535222 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
CPSF7-214ENST00000535222 RASSF10A6NK89 507 aa11.14□□□□□ -0.63
CPSF7-214ENST00000535222 NLGN1Q8N2Q7 840 aa11.14□□□□□ -0.63
CPSF7-214ENST00000535222 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
CPSF7-214ENST00000535222 LMNB1P20700 586 aa11.13□□□□□ -0.63
CPSF7-214ENST00000535222 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-214ENST00000535222 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
CPSF7-214ENST00000535222 PALLDQ8WX93 1383 aa11.13□□□□□ -0.63
CPSF7-214ENST00000535222 TMEM88BA6NKF7 163 aa11.12□□□□□ -0.63
CPSF7-214ENST00000535222 PHF14O94880 888 aa11.12□□□□□ -0.63
CPSF7-214ENST00000535222 ZCRB1Q8TBF4 217 aaKnown RBP11.12□□□□□ -0.63
CPSF7-214ENST00000535222 MCOLN1Q9GZU1 580 aa11.12□□□□□ -0.63
CPSF7-214ENST00000535222 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-214ENST00000535222 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
CPSF7-214ENST00000535222 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
CPSF7-214ENST00000535222 SOX12O15370 315 aa11.1□□□□□ -0.63
CPSF7-214ENST00000535222 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
CPSF7-214ENST00000535222 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms