RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 SHANK3Q9BYB0 1731 aa27.64■■■□□ 2.01
CHFR-209ENST00000535181 FAM196AQ6ZSG2 479 aa27.62■■■□□ 2.01
CHFR-209ENST00000535181 MARCH10Q8NA82 808 aaPredicted RBP27.61■■■□□ 2.01
CHFR-209ENST00000535181 ZCRB1Q8TBF4 217 aaKnown RBP27.61■■■□□ 2.01
CHFR-209ENST00000535181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.6■■■□□ 2.01
CHFR-209ENST00000535181 SULT6B1Q6IMI4 303 aa27.58■■■□□ 2.01
CHFR-209ENST00000535181 UPF1Q92900 1129 aaKnown RBP eCLIP27.58■■■□□ 2.01
CHFR-209ENST00000535181 FAM182BQ5T319 152 aa27.57■■■□□ 2
CHFR-209ENST00000535181 AEBP1Q8IUX7 1158 aa27.57■■■□□ 2
CHFR-209ENST00000535181 NUDCQ9Y266 331 aa27.57■■■□□ 2
CHFR-209ENST00000535181 CCDC125Q86Z20 511 aa27.56■■■□□ 2
CHFR-209ENST00000535181 PCDH11XQ9BZA7 1347 aa27.56■■■□□ 2
CHFR-209ENST00000535181 PCDH11YQ9BZA8 1340 aa27.56■■■□□ 2
CHFR-209ENST00000535181 SBF2Q86WG5 1849 aa27.54■■■□□ 2
CHFR-209ENST00000535181 SPG7Q9UQ90 795 aa27.54■■■□□ 2
CHFR-209ENST00000535181 U2SURPO15042 1029 aaKnown RBP27.52■■■□□ 2
CHFR-209ENST00000535181 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
CHFR-209ENST00000535181 DDX54Q8TDD1 881 aaKnown RBP27.51■■□□□ 1.99
CHFR-209ENST00000535181 TNS1Q9HBL0 1735 aaKnown RBP27.5■■□□□ 1.99
CHFR-209ENST00000535181 ANP32CO43423 234 aa27.5■■□□□ 1.99
CHFR-209ENST00000535181 HMOX1P09601 288 aa27.5■■□□□ 1.99
CHFR-209ENST00000535181 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
CHFR-209ENST00000535181 NHSQ6T4R5 1651 aa27.49■■□□□ 1.99
CHFR-209ENST00000535181 CYP27B1O15528 508 aa27.48■■□□□ 1.99
CHFR-209ENST00000535181 U2AF1L5P0DN76 240 aaPredicted RBP27.46■■□□□ 1.99
CHFR-209ENST00000535181 U2AF1Q01081 240 aaKnown RBP eCLIP27.46■■□□□ 1.99
CHFR-209ENST00000535181 NKX1-1Q15270 411 aaPredicted RBP27.46■■□□□ 1.99
CHFR-209ENST00000535181 RSPH6AQ9H0K4 717 aa27.45■■□□□ 1.98
CHFR-209ENST00000535181 FCHSD2O94868 740 aa27.44■■□□□ 1.98
CHFR-209ENST00000535181 TRIM37O94972 964 aa27.44■■□□□ 1.98
CHFR-209ENST00000535181 PHKG2P15735 406 aa27.44■■□□□ 1.98
CHFR-209ENST00000535181 IFNL2Q8IZJ0 200 aa27.44■■□□□ 1.98
CHFR-209ENST00000535181 DOT1LQ8TEK3 1739 aa27.44■■□□□ 1.98
CHFR-209ENST00000535181 SF3B2Q13435 895 aaKnown RBP27.43■■□□□ 1.98
CHFR-209ENST00000535181 BCL11BQ9C0K0 894 aaPredicted RBP27.43■■□□□ 1.98
CHFR-209ENST00000535181 ZNF530Q6P9A1 599 aaPredicted RBP27.4■■□□□ 1.98
CHFR-209ENST00000535181 TOGARAM1Q9Y4F4 1720 aa27.39■■□□□ 1.98
CHFR-209ENST00000535181 HSP90AB1P08238 724 aaKnown RBP27.39■■□□□ 1.98
CHFR-209ENST00000535181 PRKAR2BP31323 418 aa27.39■■□□□ 1.98
CHFR-209ENST00000535181 RGPD3A6NKT7 1758 aaPredicted RBP27.39■■□□□ 1.98
CHFR-209ENST00000535181 RGPD4Q7Z3J3 1758 aa27.39■■□□□ 1.98
CHFR-209ENST00000535181 BAG6P46379 1132 aa27.37■■□□□ 1.97
CHFR-209ENST00000535181 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
CHFR-209ENST00000535181 MTHFSDQ2M296 383 aaKnown RBP27.36■■□□□ 1.97
CHFR-209ENST00000535181 AKAP4Q5JQC9 854 aa27.36■■□□□ 1.97
CHFR-209ENST00000535181 ACSBG1Q96GR2 724 aa27.36■■□□□ 1.97
CHFR-209ENST00000535181 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
CHFR-209ENST00000535181 BTAF1O14981 1849 aa27.35■■□□□ 1.97
CHFR-209ENST00000535181 KCNQ2O43526 872 aa27.35■■□□□ 1.97
CHFR-209ENST00000535181 GAS2L2Q8NHY3 880 aa27.35■■□□□ 1.97
CHFR-209ENST00000535181 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
CHFR-209ENST00000535181 APBA3O96018 575 aa27.34■■□□□ 1.97
CHFR-209ENST00000535181 PTF1AQ7RTS3 328 aa27.34■■□□□ 1.97
CHFR-209ENST00000535181 ADAMTS7Q9UKP4 1686 aa27.33■■□□□ 1.97
CHFR-209ENST00000535181 KDM6AO15550 1401 aaPredicted RBP27.33■■□□□ 1.97
CHFR-209ENST00000535181 KAT6BQ8WYB5 2073 aa27.33■■□□□ 1.97
CHFR-209ENST00000535181 ITGB4P16144 1822 aa27.33■■□□□ 1.97
CHFR-209ENST00000535181 PHACTR3Q96KR7 559 aa27.33■■□□□ 1.97
CHFR-209ENST00000535181 PLSCR1O15162 318 aa27.32■■□□□ 1.96
CHFR-209ENST00000535181 PRIM1P49642 420 aaKnown RBP27.32■■□□□ 1.96
CHFR-209ENST00000535181 WDR43Q15061 677 aaKnown RBP eCLIP27.32■■□□□ 1.96
CHFR-209ENST00000535181 PLEKHF1Q96S99 279 aa27.32■■□□□ 1.96
CHFR-209ENST00000535181 SCN11AQ9UI33 1791 aa27.31■■□□□ 1.96
CHFR-209ENST00000535181 DEFB132Q7Z7B7 95 aa27.31■■□□□ 1.96
CHFR-209ENST00000535181 ERVV-2B6SEH9 535 aa27.29■■□□□ 1.96
CHFR-209ENST00000535181 NEFMP07197 916 aa27.29■■□□□ 1.96
CHFR-209ENST00000535181 MAP3K5Q99683 1374 aa27.28■■□□□ 1.96
CHFR-209ENST00000535181 CCDC184Q52MB2 194 aa27.28■■□□□ 1.96
CHFR-209ENST00000535181 SYTL4Q96C24 671 aaPredicted RBP27.28■■□□□ 1.96
CHFR-209ENST00000535181 CAMKK2Q96RR4 588 aa27.28■■□□□ 1.96
CHFR-209ENST00000535181 RREB1Q92766 1687 aa27.27■■□□□ 1.96
CHFR-209ENST00000535181 MRC1P22897 1456 aa27.27■■□□□ 1.96
CHFR-209ENST00000535181 EN1Q05925 392 aaPredicted RBP27.27■■□□□ 1.96
CHFR-209ENST00000535181 VIRMAQ69YN4 1812 aaKnown RBP27.26■■□□□ 1.95
CHFR-209ENST00000535181 MRS2Q9HD23 443 aa27.26■■□□□ 1.95
CHFR-209ENST00000535181 GNAT3A8MTJ3 354 aa27.25■■□□□ 1.95
CHFR-209ENST00000535181 MPRIPQ6WCQ1 1025 aa27.25■■□□□ 1.95
CHFR-209ENST00000535181 ADAMTS8Q9UP79 889 aa27.25■■□□□ 1.95
CHFR-209ENST00000535181 MAPK8IP3Q9UPT6 1336 aa27.24■■□□□ 1.95
CHFR-209ENST00000535181 TMOD3Q9NYL9 352 aa27.24■■□□□ 1.95
CHFR-209ENST00000535181 RNMTO43148 476 aaKnown RBP27.23■■□□□ 1.95
CHFR-209ENST00000535181 DIEXFQ68CQ4 756 aaKnown RBP27.23■■□□□ 1.95
CHFR-209ENST00000535181 PIGBQ92521 554 aa27.23■■□□□ 1.95
CHFR-209ENST00000535181 LY75O60449 1722 aa27.22■■□□□ 1.95
CHFR-209ENST00000535181 EZH2Q15910 746 aaKnown RBP27.22■■□□□ 1.95
CHFR-209ENST00000535181 PNISRQ8TF01 805 aaKnown RBP27.22■■□□□ 1.95
CHFR-209ENST00000535181 HTATSF1O43719 755 aaKnown RBP27.21■■□□□ 1.95
CHFR-209ENST00000535181 CEMIPQ8WUJ3 1361 aa27.21■■□□□ 1.95
CHFR-209ENST00000535181 NFE2L2Q16236 605 aa27.2■■□□□ 1.94
CHFR-209ENST00000535181 RUNDC1Q96C34 613 aa27.2■■□□□ 1.94
CHFR-209ENST00000535181 DLG5Q8TDM6 1919 aa27.2■■□□□ 1.94
CHFR-209ENST00000535181 NUP188Q5SRE5 1749 aa27.19■■□□□ 1.94
CHFR-209ENST00000535181 CABP4P57796 275 aa27.19■■□□□ 1.94
CHFR-209ENST00000535181 LGR6Q9HBX8 967 aa27.19■■□□□ 1.94
CHFR-209ENST00000535181 SMARCC1Q92922 1105 aaPredicted RBP27.18■■□□□ 1.94
CHFR-209ENST00000535181 SLC52A2Q9HAB3 445 aa27.18■■□□□ 1.94
CHFR-209ENST00000535181 IL17REQ8NFR9 667 aa27.17■■□□□ 1.94
CHFR-209ENST00000535181 TXNRD1Q16881 649 aa27.16■■□□□ 1.94
CHFR-209ENST00000535181 PROM2Q8N271 834 aa27.16■■□□□ 1.94
CHFR-209ENST00000535181 PALLDQ8WX93 1383 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms