RNA–Protein interactions for RNA: ENST00000534999.6

CACNB4-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB4, Length 2,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-209ENST00000534999 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
CACNB4-209ENST00000534999 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
CACNB4-209ENST00000534999 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
CACNB4-209ENST00000534999 APBB1O00213 710 aa13.34□□□□□ -0.27
CACNB4-209ENST00000534999 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
CACNB4-209ENST00000534999 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.27
CACNB4-209ENST00000534999 RBSNQ9H1K0 784 aa13.33□□□□□ -0.28
CACNB4-209ENST00000534999 RGS12O14924 1447 aa13.33□□□□□ -0.28
CACNB4-209ENST00000534999 MSH6P52701 1360 aa13.33□□□□□ -0.28
CACNB4-209ENST00000534999 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
CACNB4-209ENST00000534999 OFD1O75665 1012 aa13.32□□□□□ -0.28
CACNB4-209ENST00000534999 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
CACNB4-209ENST00000534999 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
CACNB4-209ENST00000534999 REC8O95072 547 aa13.32□□□□□ -0.28
CACNB4-209ENST00000534999 KRT24Q2M2I5 525 aa13.32□□□□□ -0.28
CACNB4-209ENST00000534999 COG3Q96JB2 828 aa13.32□□□□□ -0.28
CACNB4-209ENST00000534999 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
CACNB4-209ENST00000534999 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
CACNB4-209ENST00000534999 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
CACNB4-209ENST00000534999 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
CACNB4-209ENST00000534999 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
CACNB4-209ENST00000534999 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
CACNB4-209ENST00000534999 ZDHHC9Q9Y397 364 aa13.31□□□□□ -0.28
CACNB4-209ENST00000534999 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
CACNB4-209ENST00000534999 MEIS3Q99687 375 aa13.31□□□□□ -0.28
CACNB4-209ENST00000534999 ERC2O15083 957 aa13.3□□□□□ -0.28
CACNB4-209ENST00000534999 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
CACNB4-209ENST00000534999 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
CACNB4-209ENST00000534999 WASLO00401 505 aaPredicted RBP13.3□□□□□ -0.28
CACNB4-209ENST00000534999 PDLIM2Q96JY6 352 aa13.3□□□□□ -0.28
CACNB4-209ENST00000534999 PTPRCP08575 1304 aa13.29□□□□□ -0.28
CACNB4-209ENST00000534999 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
CACNB4-209ENST00000534999 NOL7Q9UMY1 257 aaKnown RBP13.29□□□□□ -0.28
CACNB4-209ENST00000534999 CHL1O00533 1208 aa13.28□□□□□ -0.28
CACNB4-209ENST00000534999 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
CACNB4-209ENST00000534999 CPS1P31327 1500 aa13.28□□□□□ -0.28
CACNB4-209ENST00000534999 RICTORQ6R327 1708 aa13.28□□□□□ -0.28
CACNB4-209ENST00000534999 TMEM63CQ9P1W3 806 aa13.28□□□□□ -0.28
CACNB4-209ENST00000534999 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.28
CACNB4-209ENST00000534999 HMMRO75330 724 aa13.27□□□□□ -0.29
CACNB4-209ENST00000534999 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
CACNB4-209ENST00000534999 LRSAM1Q6UWE0 723 aa13.27□□□□□ -0.29
CACNB4-209ENST00000534999 MCM10Q7L590 875 aa13.27□□□□□ -0.29
CACNB4-209ENST00000534999 NUDT16Q96DE0 195 aaKnown RBP13.27□□□□□ -0.29
CACNB4-209ENST00000534999 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.29
CACNB4-209ENST00000534999 KIAA0232Q92628 1395 aa13.27□□□□□ -0.29
CACNB4-209ENST00000534999 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
CACNB4-209ENST00000534999 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.29
CACNB4-209ENST00000534999 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
CACNB4-209ENST00000534999 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
CACNB4-209ENST00000534999 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
CACNB4-209ENST00000534999 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
CACNB4-209ENST00000534999 SYCE3A1L190 88 aa13.26□□□□□ -0.29
CACNB4-209ENST00000534999 ZNF500O60304 480 aaPredicted RBP13.26□□□□□ -0.29
CACNB4-209ENST00000534999 TERF1P54274 439 aa13.26□□□□□ -0.29
CACNB4-209ENST00000534999 PDE1AP54750 535 aa13.26□□□□□ -0.29
CACNB4-209ENST00000534999 NSFL1CQ9UNZ2 370 aaKnown RBP13.26□□□□□ -0.29
CACNB4-209ENST00000534999 NEK4P51957 841 aa13.25□□□□□ -0.29
CACNB4-209ENST00000534999 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
CACNB4-209ENST00000534999 TMX3Q96JJ7 454 aa13.25□□□□□ -0.29
CACNB4-209ENST00000534999 ZMYND15Q9H091 742 aa13.25□□□□□ -0.29
CACNB4-209ENST00000534999 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
CACNB4-209ENST00000534999 R3HCC1Q9Y3T6 440 aaKnown RBP13.25□□□□□ -0.29
CACNB4-209ENST00000534999 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
CACNB4-209ENST00000534999 A2ML1A8K2U0 1454 aa13.24□□□□□ -0.29
CACNB4-209ENST00000534999 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
CACNB4-209ENST00000534999 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
CACNB4-209ENST00000534999 MBD3O95983 291 aa13.24□□□□□ -0.29
CACNB4-209ENST00000534999 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
CACNB4-209ENST00000534999 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
CACNB4-209ENST00000534999 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
CACNB4-209ENST00000534999 ZKSCAN5Q9Y2L8 839 aa13.24□□□□□ -0.29
CACNB4-209ENST00000534999 MCM2P49736 904 aa13.23□□□□□ -0.29
CACNB4-209ENST00000534999 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
CACNB4-209ENST00000534999 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
CACNB4-209ENST00000534999 SETD1AO15047 1707 aaKnown RBP13.23□□□□□ -0.29
CACNB4-209ENST00000534999 BRD1O95696 1058 aa13.23□□□□□ -0.29
CACNB4-209ENST00000534999 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
CACNB4-209ENST00000534999 F6X3S4 739 aa13.22□□□□□ -0.29
CACNB4-209ENST00000534999 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
CACNB4-209ENST00000534999 MCM5P33992 734 aa13.22□□□□□ -0.29
CACNB4-209ENST00000534999 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
CACNB4-209ENST00000534999 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
CACNB4-209ENST00000534999 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
CACNB4-209ENST00000534999 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
CACNB4-209ENST00000534999 METP08581 1390 aa13.22□□□□□ -0.29
CACNB4-209ENST00000534999 CRB1P82279 1406 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 MCCP23508 829 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 CUL4AQ13619 759 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 G2E3Q7L622 706 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 RNF214Q8ND24 703 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 MIS18AQ9NYP9 233 aa13.21□□□□□ -0.29
CACNB4-209ENST00000534999 C3P01024 1663 aa13.21□□□□□ -0.3
CACNB4-209ENST00000534999 NOL8Q76FK4 1167 aaKnown RBP13.21□□□□□ -0.3
CACNB4-209ENST00000534999 PALD1Q9ULE6 856 aa13.21□□□□□ -0.3
CACNB4-209ENST00000534999 GNAI2P04899 355 aa13.2□□□□□ -0.3
CACNB4-209ENST00000534999 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
CACNB4-209ENST00000534999 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
CACNB4-209ENST00000534999 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms