RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PLIN1O60240 522 aa26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 GNAI1P63096 354 aa26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 CERKQ8TCT0 537 aa26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 RTF1Q92541 710 aaKnown RBP26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 GNAT3A8MTJ3 354 aa26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 CFAP44Q96MT7 982 aa26.37■■□□□ 1.81
TNFRSF1A-205ENST00000534885 MBIPQ9NS73 344 aa26.35■■□□□ 1.81
TNFRSF1A-205ENST00000534885 BCAR3O75815 825 aa26.35■■□□□ 1.81
TNFRSF1A-205ENST00000534885 WDR17Q8IZU2 1322 aa26.35■■□□□ 1.81
TNFRSF1A-205ENST00000534885 CRB1P82279 1406 aa26.35■■□□□ 1.81
TNFRSF1A-205ENST00000534885 HTATSF1O43719 755 aaKnown RBP26.34■■□□□ 1.81
TNFRSF1A-205ENST00000534885 LRRC37A3O60309 1634 aa26.33■■□□□ 1.81
TNFRSF1A-205ENST00000534885 PLEKHO1Q53GL0 409 aaPredicted RBP26.33■■□□□ 1.81
TNFRSF1A-205ENST00000534885 MEGF6O75095 1541 aa26.32■■□□□ 1.8
TNFRSF1A-205ENST00000534885 AMOTQ4VCS5 1084 aa26.32■■□□□ 1.8
TNFRSF1A-205ENST00000534885 RARSP54136 660 aaKnown RBP26.32■■□□□ 1.8
TNFRSF1A-205ENST00000534885 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
TNFRSF1A-205ENST00000534885 ZNF530Q6P9A1 599 aaPredicted RBP26.31■■□□□ 1.8
TNFRSF1A-205ENST00000534885 IL17REQ8NFR9 667 aa26.31■■□□□ 1.8
TNFRSF1A-205ENST00000534885 STRN4Q9NRL3 753 aa26.3■■□□□ 1.8
TNFRSF1A-205ENST00000534885 COL14A1Q05707 1796 aaKnown RBP26.3■■□□□ 1.8
TNFRSF1A-205ENST00000534885 TOM1L2Q6ZVM7 507 aa26.3■■□□□ 1.8
TNFRSF1A-205ENST00000534885 CT47B1P0C2W7 299 aaPredicted RBP26.29■■□□□ 1.8
TNFRSF1A-205ENST00000534885 CHL1O00533 1208 aa26.29■■□□□ 1.8
TNFRSF1A-205ENST00000534885 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
TNFRSF1A-205ENST00000534885 BTG4Q9NY30 223 aa26.28■■□□□ 1.8
TNFRSF1A-205ENST00000534885 TATP17735 454 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF1A-205ENST00000534885 AKAP4Q5JQC9 854 aa26.27■■□□□ 1.8
TNFRSF1A-205ENST00000534885 LARP1Q6PKG0 1096 aaKnown RBP26.27■■□□□ 1.8
TNFRSF1A-205ENST00000534885 EVA1CP58658 441 aa26.27■■□□□ 1.8
TNFRSF1A-205ENST00000534885 ERICH6BQ5W0A0 696 aa26.27■■□□□ 1.8
TNFRSF1A-205ENST00000534885 MIS18AQ9NYP9 233 aa26.26■■□□□ 1.79
TNFRSF1A-205ENST00000534885 VIRMAQ69YN4 1812 aaKnown RBP26.26■■□□□ 1.79
TNFRSF1A-205ENST00000534885 C20orf194Q5TEA3 1177 aa26.26■■□□□ 1.79
TNFRSF1A-205ENST00000534885 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
TNFRSF1A-205ENST00000534885 C1orf141Q5JVX7 400 aa26.25■■□□□ 1.79
TNFRSF1A-205ENST00000534885 CEMIPQ8WUJ3 1361 aa26.25■■□□□ 1.79
TNFRSF1A-205ENST00000534885 ADAMTS2O95450 1211 aa26.24■■□□□ 1.79
TNFRSF1A-205ENST00000534885 LGR6Q9HBX8 967 aa26.24■■□□□ 1.79
TNFRSF1A-205ENST00000534885 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.24■■□□□ 1.79
TNFRSF1A-205ENST00000534885 CARD10Q9BWT7 1032 aa26.24■■□□□ 1.79
TNFRSF1A-205ENST00000534885 PKD1L3Q7Z443 1732 aa26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 ELL2O00472 640 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 MPRIPQ6WCQ1 1025 aa26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 C8orf58Q8NAV2 365 aa26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 NUTM2BA6NNL0 878 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 NUTM2EB1AL46 878 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 NUTM2AQ8IVF1 878 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF1A-205ENST00000534885 PLCH1Q4KWH8 1693 aa26.22■■□□□ 1.79
TNFRSF1A-205ENST00000534885 SSH1Q8WYL5 1049 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 TSPYL4Q9UJ04 414 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 PARP4Q9UKK3 1724 aaKnown RBP26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 PLEKHG2Q9H7P9 1386 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 OVOS2A0A0G2JMS6 1433 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 VAMP4O75379 141 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 KRT24Q2M2I5 525 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 SPG7Q9UQ90 795 aa26.21■■□□□ 1.79
TNFRSF1A-205ENST00000534885 TWISTNBQ3B726 338 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF1A-205ENST00000534885 EXOC6Q8TAG9 804 aa26.19■■□□□ 1.78
TNFRSF1A-205ENST00000534885 FRAT1Q92837 279 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF1A-205ENST00000534885 SMC4Q9NTJ3 1288 aa26.19■■□□□ 1.78
TNFRSF1A-205ENST00000534885 RNMTO43148 476 aaKnown RBP26.18■■□□□ 1.78
TNFRSF1A-205ENST00000534885 TAF7Q15545 349 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF1A-205ENST00000534885 ADAMTS7Q9UKP4 1686 aa26.18■■□□□ 1.78
TNFRSF1A-205ENST00000534885 USP35Q9P2H5 1018 aa26.18■■□□□ 1.78
TNFRSF1A-205ENST00000534885 PPP4R2Q9NY27 417 aa26.17■■□□□ 1.78
TNFRSF1A-205ENST00000534885 JCADQ9P266 1359 aa26.16■■□□□ 1.78
TNFRSF1A-205ENST00000534885 PHKG2P15735 406 aa26.16■■□□□ 1.78
TNFRSF1A-205ENST00000534885 CRBNQ96SW2 442 aa26.16■■□□□ 1.78
TNFRSF1A-205ENST00000534885 CYP27B1O15528 508 aa26.16■■□□□ 1.78
TNFRSF1A-205ENST00000534885 CANXP27824 592 aaKnown RBP26.16■■□□□ 1.78
TNFRSF1A-205ENST00000534885 IL2RBP14784 551 aa26.15■■□□□ 1.78
TNFRSF1A-205ENST00000534885 ZNF428Q96B54 188 aa26.15■■□□□ 1.78
TNFRSF1A-205ENST00000534885 ALDH1L2Q3SY69 923 aa26.15■■□□□ 1.78
TNFRSF1A-205ENST00000534885 SCN11AQ9UI33 1791 aa26.14■■□□□ 1.78
TNFRSF1A-205ENST00000534885 TEFQ10587 303 aa26.14■■□□□ 1.77
TNFRSF1A-205ENST00000534885 IFNL2Q8IZJ0 200 aa26.14■■□□□ 1.77
TNFRSF1A-205ENST00000534885 NRAPQ86VF7 1730 aa26.14■■□□□ 1.77
TNFRSF1A-205ENST00000534885 KDM6AO15550 1401 aaPredicted RBP26.14■■□□□ 1.77
TNFRSF1A-205ENST00000534885 BABAM1Q9NWV8 329 aa26.13■■□□□ 1.77
TNFRSF1A-205ENST00000534885 TNNQ9UQP3 1299 aa26.13■■□□□ 1.77
TNFRSF1A-205ENST00000534885 SIPA1L3O60292 1781 aaPredicted RBP26.12■■□□□ 1.77
TNFRSF1A-205ENST00000534885 KDM3BQ7LBC6 1761 aa26.12■■□□□ 1.77
TNFRSF1A-205ENST00000534885 TCERG1O14776 1098 aaKnown RBP26.11■■□□□ 1.77
TNFRSF1A-205ENST00000534885 ZCRB1Q8TBF4 217 aaKnown RBP26.11■■□□□ 1.77
TNFRSF1A-205ENST00000534885 SHANK3Q9BYB0 1731 aa26.11■■□□□ 1.77
TNFRSF1A-205ENST00000534885 PDE3AQ14432 1141 aa26.1■■□□□ 1.77
TNFRSF1A-205ENST00000534885 B4GALNT3Q6L9W6 998 aa26.1■■□□□ 1.77
TNFRSF1A-205ENST00000534885 PANK1Q8TE04 598 aa26.1■■□□□ 1.77
TNFRSF1A-205ENST00000534885 NWD2Q9ULI1 1742 aa26.09■■□□□ 1.77
TNFRSF1A-205ENST00000534885 HSPA1LP34931 641 aa26.08■■□□□ 1.77
TNFRSF1A-205ENST00000534885 NOB1Q9ULX3 412 aaKnown RBP26.08■■□□□ 1.77
TNFRSF1A-205ENST00000534885 SLIT2O94813 1529 aa26.08■■□□□ 1.77
TNFRSF1A-205ENST00000534885 PCDH11XQ9BZA7 1347 aa26.08■■□□□ 1.77
TNFRSF1A-205ENST00000534885 PCDH11YQ9BZA8 1340 aa26.08■■□□□ 1.77
TNFRSF1A-205ENST00000534885 ZKSCAN2Q63HK3 967 aa26.08■■□□□ 1.77
TNFRSF1A-205ENST00000534885 KIF16BQ96L93 1317 aa26.08■■□□□ 1.76
TNFRSF1A-205ENST00000534885 BTBD11A6QL63 1104 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms