RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 PLEKHH1Q9ULM0 1364 aa15.56■□□□□ 0.08
TNC-209ENST00000534839 WDR90Q96KV7 1748 aa15.56■□□□□ 0.08
TNC-209ENST00000534839 SBF2Q86WG5 1849 aa15.56■□□□□ 0.08
TNC-209ENST00000534839 OVOS2A0A0G2JMS6 1433 aa15.55■□□□□ 0.08
TNC-209ENST00000534839 OVOS2A0A0J9YW53 1432 aa15.55■□□□□ 0.08
TNC-209ENST00000534839 OVOS2Q6IE36 1432 aa15.55■□□□□ 0.08
TNC-209ENST00000534839 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
TNC-209ENST00000534839 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
TNC-209ENST00000534839 CRYBG1Q9Y4K1 1723 aa15.54■□□□□ 0.08
TNC-209ENST00000534839 TRPM3Q9HCF6 1732 aaPredicted RBP15.54■□□□□ 0.08
TNC-209ENST00000534839 KIAA0232Q92628 1395 aa15.53■□□□□ 0.08
TNC-209ENST00000534839 ALS2Q96Q42 1657 aa15.53■□□□□ 0.08
TNC-209ENST00000534839 SSH2Q76I76 1423 aa15.52■□□□□ 0.08
TNC-209ENST00000534839 TCP11L2Q8N4U5 519 aa15.52■□□□□ 0.08
TNC-209ENST00000534839 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.08
TNC-209ENST00000534839 STK26Q9P289 416 aa15.52■□□□□ 0.08
TNC-209ENST00000534839 PARP4Q9UKK3 1724 aaKnown RBP15.51■□□□□ 0.07
TNC-209ENST00000534839 G3V3G9 751 aa15.51■□□□□ 0.07
TNC-209ENST00000534839 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
TNC-209ENST00000534839 LARP1Q6PKG0 1096 aaKnown RBP15.51■□□□□ 0.07
TNC-209ENST00000534839 EVA1CP58658 441 aa15.5■□□□□ 0.07
TNC-209ENST00000534839 TMEM92Q6UXU6 159 aa15.5■□□□□ 0.07
TNC-209ENST00000534839 DHX57Q6P158 1386 aaKnown RBP15.49■□□□□ 0.07
TNC-209ENST00000534839 TOMM70O94826 608 aa15.49■□□□□ 0.07
TNC-209ENST00000534839 CLTCL1P53675 1640 aa15.49■□□□□ 0.07
TNC-209ENST00000534839 TNS2Q63HR2 1409 aa15.49■□□□□ 0.07
TNC-209ENST00000534839 ATP7BP35670 1465 aa15.48■□□□□ 0.07
TNC-209ENST00000534839 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
TNC-209ENST00000534839 PCNTO95613 3336 aa15.47■□□□□ 0.07
TNC-209ENST00000534839 POLD1P28340 1107 aa15.47■□□□□ 0.07
TNC-209ENST00000534839 C3orf67Q6ZVT6 689 aa15.47■□□□□ 0.07
TNC-209ENST00000534839 SCUBE2Q9NQ36 999 aa15.47■□□□□ 0.07
TNC-209ENST00000534839 IFT172Q9UG01 1749 aa15.47■□□□□ 0.07
TNC-209ENST00000534839 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
TNC-209ENST00000534839 THRAP3Q9Y2W1 955 aaKnown RBP15.46■□□□□ 0.07
TNC-209ENST00000534839 NUP155O75694 1391 aa15.46■□□□□ 0.07
TNC-209ENST00000534839 HSPA1AP0DMV8 641 aaKnown RBP15.45■□□□□ 0.06
TNC-209ENST00000534839 HSPA1BP0DMV9 641 aaKnown RBP15.45■□□□□ 0.06
TNC-209ENST00000534839 ZC3H6P61129 1189 aaKnown RBP15.45■□□□□ 0.06
TNC-209ENST00000534839 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.45■□□□□ 0.06
TNC-209ENST00000534839 COL24A1Q17RW2 1714 aa15.45■□□□□ 0.06
TNC-209ENST00000534839 TOPAZ1Q8N9V7 1692 aa15.44■□□□□ 0.06
TNC-209ENST00000534839 ZNF827Q17R98 1081 aa15.44■□□□□ 0.06
TNC-209ENST00000534839 PAPPAQ13219 1627 aa15.43■□□□□ 0.06
TNC-209ENST00000534839 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
TNC-209ENST00000534839 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
TNC-209ENST00000534839 LRRC37A3O60309 1634 aa15.42■□□□□ 0.06
TNC-209ENST00000534839 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
TNC-209ENST00000534839 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
TNC-209ENST00000534839 KIF1BO60333 1816 aa15.4■□□□□ 0.06
TNC-209ENST00000534839 KNDC1Q76NI1 1749 aa15.4■□□□□ 0.06
TNC-209ENST00000534839 GPRASP1Q5JY77 1395 aa15.4■□□□□ 0.06
TNC-209ENST00000534839 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
TNC-209ENST00000534839 DDB1Q16531 1140 aa15.4■□□□□ 0.06
TNC-209ENST00000534839 MARCH10Q8NA82 808 aaPredicted RBP15.4■□□□□ 0.06
TNC-209ENST00000534839 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
TNC-209ENST00000534839 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
TNC-209ENST00000534839 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
TNC-209ENST00000534839 BCL9O00512 1426 aa15.38■□□□□ 0.05
TNC-209ENST00000534839 LMO7Q8WWI1 1683 aa15.36■□□□□ 0.05
TNC-209ENST00000534839 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
TNC-209ENST00000534839 PPLO60437 1756 aa15.35■□□□□ 0.05
TNC-209ENST00000534839 TULP4Q9NRJ4 1543 aa15.35■□□□□ 0.05
TNC-209ENST00000534839 C2orf72A6NCS6 295 aa15.35■□□□□ 0.05
TNC-209ENST00000534839 ANKARQ7Z5J8 1434 aa15.34■□□□□ 0.05
TNC-209ENST00000534839 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
TNC-209ENST00000534839 NMRK2Q9NPI5 230 aa15.34■□□□□ 0.05
TNC-209ENST00000534839 PNPLA7Q6ZV29 1317 aa15.34■□□□□ 0.05
TNC-209ENST00000534839 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
TNC-209ENST00000534839 CRISPLD2Q9H0B8 497 aa15.32■□□□□ 0.04
TNC-209ENST00000534839 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
TNC-209ENST00000534839 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
TNC-209ENST00000534839 CRB1P82279 1406 aa15.32■□□□□ 0.04
TNC-209ENST00000534839 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
TNC-209ENST00000534839 COL5A2P05997 1499 aaPredicted RBP15.32■□□□□ 0.04
TNC-209ENST00000534839 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
TNC-209ENST00000534839 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
TNC-209ENST00000534839 QSER1Q2KHR3 1735 aa15.31■□□□□ 0.04
TNC-209ENST00000534839 AKAP12Q02952 1782 aa15.3■□□□□ 0.04
TNC-209ENST00000534839 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
TNC-209ENST00000534839 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
TNC-209ENST00000534839 FSTL1Q12841 308 aa15.29■□□□□ 0.04
TNC-209ENST00000534839 PRR36Q9H6K5 1346 aa15.28■□□□□ 0.04
TNC-209ENST00000534839 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
TNC-209ENST00000534839 GPHNQ9NQX3 736 aaPredicted RBP15.28■□□□□ 0.04
TNC-209ENST00000534839 MLLT1Q03111 559 aaPredicted RBP15.27■□□□□ 0.04
TNC-209ENST00000534839 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
TNC-209ENST00000534839 CPDO75976 1380 aa15.26■□□□□ 0.03
TNC-209ENST00000534839 CD2APQ9Y5K6 639 aa15.26■□□□□ 0.03
TNC-209ENST00000534839 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
TNC-209ENST00000534839 ACSBG1Q96GR2 724 aa15.25■□□□□ 0.03
TNC-209ENST00000534839 LARP6Q9BRS8 491 aaKnown RBP15.25■□□□□ 0.03
TNC-209ENST00000534839 KIAA1210Q9ULL0 1709 aa15.25■□□□□ 0.03
TNC-209ENST00000534839 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
TNC-209ENST00000534839 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
TNC-209ENST00000534839 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
TNC-209ENST00000534839 DSG2Q14126 1118 aa15.24■□□□□ 0.03
TNC-209ENST00000534839 WNK3Q9BYP7 1800 aa15.24■□□□□ 0.03
TNC-209ENST00000534839 PDE4AP27815 886 aa15.23■□□□□ 0.03
TNC-209ENST00000534839 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms