RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 PSDA5PKW4 1024 aaPredicted RBP24.5■■□□□ 1.51
CAPRIN1-217ENST00000534825 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
CAPRIN1-217ENST00000534825 EYA1Q99502 592 aa24.49■■□□□ 1.51
CAPRIN1-217ENST00000534825 R3HDM1Q15032 1099 aaKnown RBP24.47■■□□□ 1.51
CAPRIN1-217ENST00000534825 TATP17735 454 aaPredicted RBP24.46■■□□□ 1.51
CAPRIN1-217ENST00000534825 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
CAPRIN1-217ENST00000534825 NCAPD2Q15021 1401 aa24.44■■□□□ 1.5
CAPRIN1-217ENST00000534825 NBPF14Q5TI25 921 aa24.42■■□□□ 1.5
CAPRIN1-217ENST00000534825 PRIM1P49642 420 aaKnown RBP24.41■■□□□ 1.5
CAPRIN1-217ENST00000534825 TXNRD1Q16881 649 aa24.41■■□□□ 1.5
CAPRIN1-217ENST00000534825 RREB1Q92766 1687 aa24.4■■□□□ 1.5
CAPRIN1-217ENST00000534825 CYP27B1O15528 508 aa24.39■■□□□ 1.49
CAPRIN1-217ENST00000534825 CC2D1BQ5T0F9 858 aaKnown RBP24.39■■□□□ 1.49
CAPRIN1-217ENST00000534825 KAT6BQ8WYB5 2073 aa24.38■■□□□ 1.49
CAPRIN1-217ENST00000534825 NHSQ6T4R5 1651 aa24.37■■□□□ 1.49
CAPRIN1-217ENST00000534825 NUP188Q5SRE5 1749 aa24.37■■□□□ 1.49
CAPRIN1-217ENST00000534825 SHANK3Q9BYB0 1731 aa24.37■■□□□ 1.49
CAPRIN1-217ENST00000534825 RGPD3A6NKT7 1758 aaPredicted RBP24.37■■□□□ 1.49
CAPRIN1-217ENST00000534825 RGPD4Q7Z3J3 1758 aa24.37■■□□□ 1.49
CAPRIN1-217ENST00000534825 IGSF1Q8N6C5 1336 aa24.36■■□□□ 1.49
CAPRIN1-217ENST00000534825 PCDH11XQ9BZA7 1347 aa24.36■■□□□ 1.49
CAPRIN1-217ENST00000534825 PCDH11YQ9BZA8 1340 aa24.36■■□□□ 1.49
CAPRIN1-217ENST00000534825 ANO8Q9HCE9 1232 aaPredicted RBP24.36■■□□□ 1.49
CAPRIN1-217ENST00000534825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.36■■□□□ 1.498e-8■■■□□ 15.3
CAPRIN1-217ENST00000534825 NPC1L1Q9UHC9 1359 aa24.36■■□□□ 1.49
CAPRIN1-217ENST00000534825 MTHFSP49914 203 aa24.35■■□□□ 1.49
CAPRIN1-217ENST00000534825 SYTL4Q96C24 671 aaPredicted RBP24.35■■□□□ 1.49
CAPRIN1-217ENST00000534825 IL13P35225 146 aa24.34■■□□□ 1.49
CAPRIN1-217ENST00000534825 SPG7Q9UQ90 795 aa24.34■■□□□ 1.49
CAPRIN1-217ENST00000534825 NKX1-1Q15270 411 aaPredicted RBP24.33■■□□□ 1.49
CAPRIN1-217ENST00000534825 LRRC4BQ9NT99 713 aa24.32■■□□□ 1.48
CAPRIN1-217ENST00000534825 BTAF1O14981 1849 aa24.3■■□□□ 1.48
CAPRIN1-217ENST00000534825 AEBP1Q8IUX7 1158 aa24.29■■□□□ 1.48
CAPRIN1-217ENST00000534825 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
CAPRIN1-217ENST00000534825 SLC15A2Q16348 729 aa24.28■■□□□ 1.48
CAPRIN1-217ENST00000534825 PHKG2P15735 406 aa24.27■■□□□ 1.48
CAPRIN1-217ENST00000534825 PLEKHG2Q9H7P9 1386 aa24.27■■□□□ 1.48
CAPRIN1-217ENST00000534825 SLC27A3Q5K4L6 730 aa24.26■■□□□ 1.47
CAPRIN1-217ENST00000534825 SULT6B1Q6IMI4 303 aa24.26■■□□□ 1.47
CAPRIN1-217ENST00000534825 IFNL2Q8IZJ0 200 aa24.26■■□□□ 1.47
CAPRIN1-217ENST00000534825 PDGFDQ9GZP0 370 aaPredicted RBP24.26■■□□□ 1.47
CAPRIN1-217ENST00000534825 PKD1L3Q7Z443 1732 aa24.26■■□□□ 1.47
CAPRIN1-217ENST00000534825 STK32BQ9NY57 414 aa24.25■■□□□ 1.47
CAPRIN1-217ENST00000534825 KCNQ4P56696 695 aa24.24■■□□□ 1.47
CAPRIN1-217ENST00000534825 MPRIPQ6WCQ1 1025 aa24.24■■□□□ 1.47
CAPRIN1-217ENST00000534825 DOT1LQ8TEK3 1739 aa24.24■■□□□ 1.47
CAPRIN1-217ENST00000534825 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
CAPRIN1-217ENST00000534825 PLEKHO1Q53GL0 409 aaPredicted RBP24.23■■□□□ 1.47
CAPRIN1-217ENST00000534825 PIGBQ92521 554 aa24.23■■□□□ 1.47
CAPRIN1-217ENST00000534825 KDRP35968 1356 aa24.23■■□□□ 1.47
CAPRIN1-217ENST00000534825 DIAPH1O60610 1272 aaKnown RBP24.21■■□□□ 1.47
CAPRIN1-217ENST00000534825 AMOTQ4VCS5 1084 aa24.21■■□□□ 1.47
CAPRIN1-217ENST00000534825 AKT1S1Q96B36 256 aa24.21■■□□□ 1.47
CAPRIN1-217ENST00000534825 LRP5O75197 1615 aa24.21■■□□□ 1.47
CAPRIN1-217ENST00000534825 ZNF827Q17R98 1081 aa24.2■■□□□ 1.46
CAPRIN1-217ENST00000534825 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
CAPRIN1-217ENST00000534825 SPON1Q9HCB6 807 aa24.17■■□□□ 1.46
CAPRIN1-217ENST00000534825 PAPPAQ13219 1627 aa24.17■■□□□ 1.46
CAPRIN1-217ENST00000534825 HMOX1P09601 288 aa24.16■■□□□ 1.46
CAPRIN1-217ENST00000534825 ZNF530Q6P9A1 599 aaPredicted RBP24.16■■□□□ 1.46
CAPRIN1-217ENST00000534825 TOGARAM1Q9Y4F4 1720 aa24.15■■□□□ 1.46
CAPRIN1-217ENST00000534825 HSP90AB1P08238 724 aaKnown RBP24.15■■□□□ 1.46
CAPRIN1-217ENST00000534825 SMARCC1Q92922 1105 aaPredicted RBP24.15■■□□□ 1.46
CAPRIN1-217ENST00000534825 DCAF5Q96JK2 942 aa24.15■■□□□ 1.46
CAPRIN1-217ENST00000534825 ERVV-2B6SEH9 535 aa24.14■■□□□ 1.45
CAPRIN1-217ENST00000534825 LY75O60449 1722 aa24.14■■□□□ 1.45
CAPRIN1-217ENST00000534825 PPP2R1AP30153 589 aa24.14■■□□□ 1.45
CAPRIN1-217ENST00000534825 TMOD3Q9NYL9 352 aa24.14■■□□□ 1.45
CAPRIN1-217ENST00000534825 PALLDQ8WX93 1383 aa24.14■■□□□ 1.45
CAPRIN1-217ENST00000534825 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
CAPRIN1-217ENST00000534825 ZBTB7AO95365 584 aa24.13■■□□□ 1.45
CAPRIN1-217ENST00000534825 ASAP1Q9ULH1 1129 aa24.13■■□□□ 1.45
CAPRIN1-217ENST00000534825 ITGB4P16144 1822 aa24.12■■□□□ 1.45
CAPRIN1-217ENST00000534825 CASZ1Q86V15 1759 aa24.11■■□□□ 1.45
CAPRIN1-217ENST00000534825 ATG3Q9NT62 314 aa24.11■■□□□ 1.45
CAPRIN1-217ENST00000534825 PTGER2P43116 358 aa24.1■■□□□ 1.45
CAPRIN1-217ENST00000534825 C1orf141Q5JVX7 400 aa24.1■■□□□ 1.45
CAPRIN1-217ENST00000534825 ATF5Q9Y2D1 282 aaPredicted RBP24.1■■□□□ 1.45
CAPRIN1-217ENST00000534825 KDM6AO15550 1401 aaPredicted RBP24.1■■□□□ 1.45
CAPRIN1-217ENST00000534825 TFCP2L1Q9NZI6 479 aa24.09■■□□□ 1.45
CAPRIN1-217ENST00000534825 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
CAPRIN1-217ENST00000534825 MTHFSDQ2M296 383 aaKnown RBP24.08■■□□□ 1.45
CAPRIN1-217ENST00000534825 MTFR1LQ9H019 292 aa24.08■■□□□ 1.45
CAPRIN1-217ENST00000534825 LOC102724428A0A0B4J2F2 783 aa24.07■■□□□ 1.44
CAPRIN1-217ENST00000534825 U2SURPO15042 1029 aaKnown RBP24.07■■□□□ 1.44
CAPRIN1-217ENST00000534825 SIK1P57059 783 aa24.07■■□□□ 1.44
CAPRIN1-217ENST00000534825 AKAP4Q5JQC9 854 aa24.07■■□□□ 1.44
CAPRIN1-217ENST00000534825 SGIP1Q9BQI5 828 aa24.07■■□□□ 1.44
CAPRIN1-217ENST00000534825 CABP4P57796 275 aa24.06■■□□□ 1.44
CAPRIN1-217ENST00000534825 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
CAPRIN1-217ENST00000534825 HMGB2P26583 209 aaKnown RBP24.05■■□□□ 1.44
CAPRIN1-217ENST00000534825 NFATC2IPQ8NCF5 419 aa24.05■■□□□ 1.44
CAPRIN1-217ENST00000534825 LGR6Q9HBX8 967 aa24.05■■□□□ 1.44
CAPRIN1-217ENST00000534825 DDX10Q13206 875 aaKnown RBP24.04■■□□□ 1.44
CAPRIN1-217ENST00000534825 SLC16A10Q8TF71 515 aa24.04■■□□□ 1.44
CAPRIN1-217ENST00000534825 ITPK1Q13572 414 aa24.03■■□□□ 1.44
CAPRIN1-217ENST00000534825 COL23A1Q86Y22 540 aaPredicted RBP24.03■■□□□ 1.44
CAPRIN1-217ENST00000534825 SLC4A9Q96Q91 983 aa24.03■■□□□ 1.44
CAPRIN1-217ENST00000534825 RNMTO43148 476 aaKnown RBP24.01■■□□□ 1.43
CAPRIN1-217ENST00000534825 ATP6V1AP38606 617 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms