RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 USP47Q96K76 1375 aa14.93□□□□□ -0.02
PTP4A2-216ENST00000534796 AMPHP49418 695 aa14.92□□□□□ -0.02
PTP4A2-216ENST00000534796 PROM2Q8N271 834 aa14.92□□□□□ -0.02
PTP4A2-216ENST00000534796 STK32BQ9NY57 414 aa14.92□□□□□ -0.02
PTP4A2-216ENST00000534796 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
PTP4A2-216ENST00000534796 LTN1O94822 1766 aa14.92□□□□□ -0.02
PTP4A2-216ENST00000534796 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
PTP4A2-216ENST00000534796 MAP3K19Q56UN5 1328 aa14.91□□□□□ -0.02
PTP4A2-216ENST00000534796 RTL1A6NKG5 1358 aa14.9□□□□□ -0.02
PTP4A2-216ENST00000534796 HOXC9P31274 260 aa14.9□□□□□ -0.02
PTP4A2-216ENST00000534796 LTV1Q96GA3 475 aaPredicted RBP14.89□□□□□ -0.03
PTP4A2-216ENST00000534796 ACSBG1Q96GR2 724 aa14.89□□□□□ -0.03
PTP4A2-216ENST00000534796 NHSQ6T4R5 1651 aa14.88□□□□□ -0.03
PTP4A2-216ENST00000534796 FAM208AQ9UK61 1670 aaKnown RBP14.88□□□□□ -0.03
PTP4A2-216ENST00000534796 SLC15A2Q16348 729 aa14.88□□□□□ -0.03
PTP4A2-216ENST00000534796 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
PTP4A2-216ENST00000534796 FYB1O15117 783 aa14.87□□□□□ -0.03
PTP4A2-216ENST00000534796 SMG6Q86US8 1419 aaKnown RBP14.86□□□□□ -0.03
PTP4A2-216ENST00000534796 DDX54Q8TDD1 881 aaKnown RBP14.86□□□□□ -0.03
PTP4A2-216ENST00000534796 GGNBP2Q9H3C7 697 aa14.85□□□□□ -0.03
PTP4A2-216ENST00000534796 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
PTP4A2-216ENST00000534796 KIF24Q5T7B8 1368 aa14.85□□□□□ -0.03
PTP4A2-216ENST00000534796 ZBTB7AO95365 584 aa14.84□□□□□ -0.03
PTP4A2-216ENST00000534796 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
PTP4A2-216ENST00000534796 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
PTP4A2-216ENST00000534796 MTFR1LQ9H019 292 aa14.84□□□□□ -0.03
PTP4A2-216ENST00000534796 CASZ1Q86V15 1759 aa14.83□□□□□ -0.03
PTP4A2-216ENST00000534796 PITPNM1O00562 1244 aa14.83□□□□□ -0.04
PTP4A2-216ENST00000534796 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
PTP4A2-216ENST00000534796 FBLN1P23142 703 aa14.82□□□□□ -0.04
PTP4A2-216ENST00000534796 RAPGEF4Q8WZA2 1011 aa14.82□□□□□ -0.04
PTP4A2-216ENST00000534796 PDGFDQ9GZP0 370 aaPredicted RBP14.82□□□□□ -0.04
PTP4A2-216ENST00000534796 SYTL4Q96C24 671 aaPredicted RBP14.81□□□□□ -0.04
PTP4A2-216ENST00000534796 INSRP06213 1382 aa14.81□□□□□ -0.04
PTP4A2-216ENST00000534796 FLT4P35916 1363 aa14.81□□□□□ -0.04
PTP4A2-216ENST00000534796 HMGB2P26583 209 aaKnown RBP14.8□□□□□ -0.04
PTP4A2-216ENST00000534796 PTGER2P43116 358 aa14.8□□□□□ -0.04
PTP4A2-216ENST00000534796 NBPF6Q5VWK0 638 aa14.8□□□□□ -0.04
PTP4A2-216ENST00000534796 NBPF4Q96M43 638 aa14.8□□□□□ -0.04
PTP4A2-216ENST00000534796 BTAF1O14981 1849 aa14.79□□□□□ -0.04
PTP4A2-216ENST00000534796 MEGF6O75095 1541 aa14.79□□□□□ -0.04
PTP4A2-216ENST00000534796 TATP17735 454 aaPredicted RBP14.79□□□□□ -0.04
PTP4A2-216ENST00000534796 PRIM1P49642 420 aaKnown RBP14.79□□□□□ -0.04
PTP4A2-216ENST00000534796 PAPPAQ13219 1627 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 NSD3Q9BZ95 1437 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 YY1P25490 414 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 SLC16A10Q8TF71 515 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 PCGF6Q9BYE7 350 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 LRRC4BQ9NT99 713 aa14.78□□□□□ -0.04
PTP4A2-216ENST00000534796 PCDH11XQ9BZA7 1347 aa14.76□□□□□ -0.05
PTP4A2-216ENST00000534796 PCDH11YQ9BZA8 1340 aa14.76□□□□□ -0.05
PTP4A2-216ENST00000534796 ZNF827Q17R98 1081 aa14.76□□□□□ -0.05
PTP4A2-216ENST00000534796 USHBP1Q8N6Y0 703 aa14.76□□□□□ -0.05
PTP4A2-216ENST00000534796 SGIP1Q9BQI5 828 aa14.76□□□□□ -0.05
PTP4A2-216ENST00000534796 ARXQ96QS3 562 aa14.75□□□□□ -0.05
PTP4A2-216ENST00000534796 TFCP2L1Q9NZI6 479 aa14.75□□□□□ -0.05
PTP4A2-216ENST00000534796 KIF20BQ96Q89 1820 aa14.75□□□□□ -0.05
PTP4A2-216ENST00000534796 KAT6BQ8WYB5 2073 aa14.75□□□□□ -0.05
PTP4A2-216ENST00000534796 NSD2O96028 1365 aa14.74□□□□□ -0.05
PTP4A2-216ENST00000534796 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
PTP4A2-216ENST00000534796 FHDC1Q9C0D6 1143 aaPredicted RBP14.74□□□□□ -0.05
PTP4A2-216ENST00000534796 CCNL1Q9UK58 526 aaPredicted RBP14.74□□□□□ -0.05
PTP4A2-216ENST00000534796 PPM1GO15355 546 aaPredicted RBP14.73□□□□□ -0.05
PTP4A2-216ENST00000534796 POLD1P28340 1107 aa14.73□□□□□ -0.05
PTP4A2-216ENST00000534796 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
PTP4A2-216ENST00000534796 MYOM1P52179 1685 aa14.73□□□□□ -0.05
PTP4A2-216ENST00000534796 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
PTP4A2-216ENST00000534796 DOT1LQ8TEK3 1739 aa14.72□□□□□ -0.05
PTP4A2-216ENST00000534796 WASHC2AQ641Q2 1341 aa14.72□□□□□ -0.05
PTP4A2-216ENST00000534796 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.057e-15■■■■■ 46
PTP4A2-216ENST00000534796 PNPLA7Q6ZV29 1317 aa14.71□□□□□ -0.05
PTP4A2-216ENST00000534796 RGPD2P0DJD1 1756 aa14.71□□□□□ -0.05
PTP4A2-216ENST00000534796 SPDYE1Q8NFV5 336 aaPredicted RBP14.71□□□□□ -0.05
PTP4A2-216ENST00000534796 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
PTP4A2-216ENST00000534796 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
PTP4A2-216ENST00000534796 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
PTP4A2-216ENST00000534796 NCAPD2Q15021 1401 aa14.69□□□□□ -0.06
PTP4A2-216ENST00000534796 KCNQ4P56696 695 aa14.69□□□□□ -0.06
PTP4A2-216ENST00000534796 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
PTP4A2-216ENST00000534796 SMARCC1Q92922 1105 aaPredicted RBP14.69□□□□□ -0.06
PTP4A2-216ENST00000534796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.69□□□□□ -0.06
PTP4A2-216ENST00000534796 QSER1Q2KHR3 1735 aa14.69□□□□□ -0.06
PTP4A2-216ENST00000534796 CYP27B1O15528 508 aa14.68□□□□□ -0.06
PTP4A2-216ENST00000534796 MPRIPQ6WCQ1 1025 aa14.68□□□□□ -0.06
PTP4A2-216ENST00000534796 POLKQ9UBT6 870 aa14.68□□□□□ -0.06
PTP4A2-216ENST00000534796 LY75O60449 1722 aa14.68□□□□□ -0.06
PTP4A2-216ENST00000534796 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
PTP4A2-216ENST00000534796 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
PTP4A2-216ENST00000534796 PALLDQ8WX93 1383 aa14.67□□□□□ -0.06
PTP4A2-216ENST00000534796 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
PTP4A2-216ENST00000534796 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
PTP4A2-216ENST00000534796 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
PTP4A2-216ENST00000534796 EYA1Q99502 592 aa14.66□□□□□ -0.06
PTP4A2-216ENST00000534796 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
PTP4A2-216ENST00000534796 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
PTP4A2-216ENST00000534796 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTP4A2-216ENST00000534796 COL23A1Q86Y22 540 aaPredicted RBP14.64□□□□□ -0.07
PTP4A2-216ENST00000534796 IFNL2Q8IZJ0 200 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms