RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 ANKRD36BQ8N2N9 1353 aa18.94■□□□□ 0.62
UPK2-202ENST00000534788 TFCP2L1Q9NZI6 479 aa18.94■□□□□ 0.62
UPK2-202ENST00000534788 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
UPK2-202ENST00000534788 YBX3P16989 372 aaKnown RBP eCLIP18.92■□□□□ 0.62
UPK2-202ENST00000534788 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
UPK2-202ENST00000534788 IFFO2Q5TF58 517 aa18.92■□□□□ 0.62
UPK2-202ENST00000534788 TMC1Q8TDI8 760 aa18.92■□□□□ 0.62
UPK2-202ENST00000534788 IP6K1Q92551 441 aa18.92■□□□□ 0.62
UPK2-202ENST00000534788 SLC12A5Q9H2X9 1139 aa18.92■□□□□ 0.62
UPK2-202ENST00000534788 C5P01031 1676 aa18.92■□□□□ 0.62
UPK2-202ENST00000534788 HDGFL2Q7Z4V5 671 aaPredicted RBP18.91■□□□□ 0.62
UPK2-202ENST00000534788 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
UPK2-202ENST00000534788 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
UPK2-202ENST00000534788 MEGF6O75095 1541 aa18.9■□□□□ 0.62
UPK2-202ENST00000534788 TAF1LQ8IZX4 1826 aa18.89■□□□□ 0.61
UPK2-202ENST00000534788 SLC24A1O60721 1099 aa18.88■□□□□ 0.61
UPK2-202ENST00000534788 GRIN3BO60391 1043 aa18.87■□□□□ 0.61
UPK2-202ENST00000534788 COL23A1Q86Y22 540 aaPredicted RBP18.87■□□□□ 0.61
UPK2-202ENST00000534788 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
UPK2-202ENST00000534788 CCNL1Q9UK58 526 aaPredicted RBP18.87■□□□□ 0.61
UPK2-202ENST00000534788 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
UPK2-202ENST00000534788 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
UPK2-202ENST00000534788 TERF2IPQ9NYB0 399 aa18.86■□□□□ 0.61
UPK2-202ENST00000534788 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
UPK2-202ENST00000534788 HOXC9P31274 260 aa18.85■□□□□ 0.61
UPK2-202ENST00000534788 MSH5O43196 834 aa18.84■□□□□ 0.61
UPK2-202ENST00000534788 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
UPK2-202ENST00000534788 USP47Q96K76 1375 aa18.83■□□□□ 0.61
UPK2-202ENST00000534788 FBLN1P23142 703 aa18.83■□□□□ 0.6
UPK2-202ENST00000534788 MSL1Q68DK7 614 aa18.83■□□□□ 0.6
UPK2-202ENST00000534788 CEP350Q5VT06 3117 aa18.83■□□□□ 0.6
UPK2-202ENST00000534788 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.6
UPK2-202ENST00000534788 ADCY9O60503 1353 aa18.81■□□□□ 0.6
UPK2-202ENST00000534788 PUS7Q96PZ0 661 aaKnown RBP18.81■□□□□ 0.6
UPK2-202ENST00000534788 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
UPK2-202ENST00000534788 ITGB4P16144 1822 aa18.8■□□□□ 0.6
UPK2-202ENST00000534788 AMPHP49418 695 aa18.8■□□□□ 0.6
UPK2-202ENST00000534788 COG3Q96JB2 828 aa18.8■□□□□ 0.6
UPK2-202ENST00000534788 CD2APQ9Y5K6 639 aa18.79■□□□□ 0.6
UPK2-202ENST00000534788 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
UPK2-202ENST00000534788 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
UPK2-202ENST00000534788 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
UPK2-202ENST00000534788 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
UPK2-202ENST00000534788 GPBP1L1Q9HC44 474 aaPredicted RBP18.77■□□□□ 0.6
UPK2-202ENST00000534788 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
UPK2-202ENST00000534788 USHBP1Q8N6Y0 703 aa18.76■□□□□ 0.59
UPK2-202ENST00000534788 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
UPK2-202ENST00000534788 PALLDQ8WX93 1383 aa18.75■□□□□ 0.59
UPK2-202ENST00000534788 HSPA6P17066 643 aa18.74■□□□□ 0.59
UPK2-202ENST00000534788 RRS1Q15050 365 aaKnown RBP18.74■□□□□ 0.59
UPK2-202ENST00000534788 FLAD1Q8NFF5 587 aa18.74■□□□□ 0.59
UPK2-202ENST00000534788 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
UPK2-202ENST00000534788 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
UPK2-202ENST00000534788 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
UPK2-202ENST00000534788 ZNF526Q8TF50 670 aaPredicted RBP18.73■□□□□ 0.59
UPK2-202ENST00000534788 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
UPK2-202ENST00000534788 TESK2Q96S53 571 aa18.73■□□□□ 0.59
UPK2-202ENST00000534788 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
UPK2-202ENST00000534788 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
UPK2-202ENST00000534788 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
UPK2-202ENST00000534788 TATP17735 454 aaPredicted RBP18.71■□□□□ 0.59
UPK2-202ENST00000534788 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
UPK2-202ENST00000534788 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.58
UPK2-202ENST00000534788 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
UPK2-202ENST00000534788 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
UPK2-202ENST00000534788 WWC3Q9ULE0 1092 aa18.69■□□□□ 0.58
UPK2-202ENST00000534788 INSRP06213 1382 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 KIF13BQ9NQT8 1826 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 ST20-MTHFSA0A0A6YYL1 179 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 FYB1O15117 783 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 CYP27B1O15528 508 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 HMGB2P26583 209 aaKnown RBP18.68■□□□□ 0.58
UPK2-202ENST00000534788 SMIM5Q71RC9 77 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 AK7Q96M32 723 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 GGNBP2Q9H3C7 697 aa18.68■□□□□ 0.58
UPK2-202ENST00000534788 HSP90AB2PQ58FF8 381 aa18.67■□□□□ 0.58
UPK2-202ENST00000534788 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
UPK2-202ENST00000534788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
UPK2-202ENST00000534788 KIF3CO14782 793 aa18.66■□□□□ 0.58
UPK2-202ENST00000534788 PHF14O94880 888 aa18.66■□□□□ 0.58
UPK2-202ENST00000534788 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
UPK2-202ENST00000534788 FLT4P35916 1363 aa18.66■□□□□ 0.58
UPK2-202ENST00000534788 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
UPK2-202ENST00000534788 ANKRD26Q9UPS8 1709 aa18.65■□□□□ 0.58
UPK2-202ENST00000534788 N4BP2Q86UW6 1770 aaPredicted RBP18.65■□□□□ 0.58
UPK2-202ENST00000534788 NCAPD2Q15021 1401 aa18.65■□□□□ 0.58
UPK2-202ENST00000534788 TMF1P82094 1093 aa18.64■□□□□ 0.57
UPK2-202ENST00000534788 KIF24Q5T7B8 1368 aa18.64■□□□□ 0.57
UPK2-202ENST00000534788 SSFA2P28290 1259 aa18.63■□□□□ 0.57
UPK2-202ENST00000534788 PIGBQ92521 554 aa18.63■□□□□ 0.57
UPK2-202ENST00000534788 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
UPK2-202ENST00000534788 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
UPK2-202ENST00000534788 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
UPK2-202ENST00000534788 PXDNLA1KZ92 1463 aa18.6■□□□□ 0.57
UPK2-202ENST00000534788 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
UPK2-202ENST00000534788 SIK1P57059 783 aa18.6■□□□□ 0.57
UPK2-202ENST00000534788 ITPK1Q13572 414 aa18.58■□□□□ 0.56
UPK2-202ENST00000534788 GNPATO15228 680 aa18.57■□□□□ 0.56
UPK2-202ENST00000534788 EIF4G2P78344 907 aaKnown RBP eCLIP18.57■□□□□ 0.56
UPK2-202ENST00000534788 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms