RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 HSP90AB2PQ58FF8 381 aa8.47□□□□□ -1.05
NPIPA1-204ENST00000534720 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
NPIPA1-204ENST00000534720 RTL1A6NKG5 1358 aa8.47□□□□□ -1.05
NPIPA1-204ENST00000534720 ARHGEF10O15013 1369 aa8.47□□□□□ -1.05
NPIPA1-204ENST00000534720 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
NPIPA1-204ENST00000534720 AMPHP49418 695 aa8.46□□□□□ -1.05
NPIPA1-204ENST00000534720 RGPD5Q99666 1765 aa8.46□□□□□ -1.05
NPIPA1-204ENST00000534720 MSH6P52701 1360 aa8.46□□□□□ -1.05
NPIPA1-204ENST00000534720 SOX12O15370 315 aa8.46□□□□□ -1.06
NPIPA1-204ENST00000534720 NUTM2GQ5VZR2 741 aa8.46□□□□□ -1.06
NPIPA1-204ENST00000534720 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.06
NPIPA1-204ENST00000534720 PHACTR3Q96KR7 559 aa8.46□□□□□ -1.06
NPIPA1-204ENST00000534720 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 FOXO3O43524 673 aa8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 CT47B1P0C2W7 299 aaPredicted RBP8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 HOXC9P31274 260 aa8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 KCNH5Q8NCM2 988 aa8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 CRYBG1Q9Y4K1 1723 aa8.45□□□□□ -1.06
NPIPA1-204ENST00000534720 PLIN1O60240 522 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 KDRP35968 1356 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 CALD1Q05682 793 aaKnown RBP8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 LMOD3Q0VAK6 560 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 SULT6B1Q6IMI4 303 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 ZNF467Q7Z7K2 595 aaPredicted RBP8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 HS6ST3Q8IZP7 471 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 EXOC6Q8TAG9 804 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 BBXQ8WY36 941 aaPredicted RBP8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 ARXQ96QS3 562 aa8.44□□□□□ -1.06
NPIPA1-204ENST00000534720 USP19O94966 1318 aa8.43□□□□□ -1.06
NPIPA1-204ENST00000534720 AEBP1Q8IUX7 1158 aa8.43□□□□□ -1.06
NPIPA1-204ENST00000534720 CAMTA1Q9Y6Y1 1673 aa8.43□□□□□ -1.06
NPIPA1-204ENST00000534720 BCAR3O75815 825 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 RARSP54136 660 aaKnown RBP8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 IP6K1Q92551 441 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 KIF12Q96FN5 646 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 CCDC136Q96JN2 1154 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 EYA1Q99502 592 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 NPHP3Q7Z494 1330 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 XPCQ01831 940 aaPredicted RBP8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 SGIP1Q9BQI5 828 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 MED1Q15648 1581 aaPredicted RBP8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 COL18A1P39060 1754 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 PXDNQ92626 1479 aa8.42□□□□□ -1.06
NPIPA1-204ENST00000534720 FAM208AQ9UK61 1670 aaKnown RBP8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 ZNF335Q9H4Z2 1342 aaPredicted RBP8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 MAP3K13O43283 966 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 ZNF853P0CG23 659 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 GNAI1P63096 354 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 PCDHB13Q9Y5F0 798 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 LRRC37A3O60309 1634 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 NHSL1Q5SYE7 1610 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 CACNA1FO60840 1977 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 GCP02774 474 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 PDE3AQ14432 1141 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 ARHGEF25Q86VW2 580 aa8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 ZNF579Q8NAF0 562 aaKnown RBP8.41□□□□□ -1.06
NPIPA1-204ENST00000534720 TNS3Q68CZ2 1445 aa8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 ABCC6O95255 1503 aa8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 STK25O00506 426 aa8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 ZFP91Q96JP5 570 aaPredicted RBP8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.06
NPIPA1-204ENST00000534720 LMO7Q8WWI1 1683 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 LMOD2Q6P5Q4 547 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 GAS2L2Q8NHY3 880 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 ZNF428Q96B54 188 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 PHF12Q96QT6 1004 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 ABCA3Q99758 1704 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 NCAPD2Q15021 1401 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 TSHZ2Q9NRE2 1034 aa8.39□□□□□ -1.07
NPIPA1-204ENST00000534720 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 HTATSF1O43719 755 aaKnown RBP8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 CANXP27824 592 aaKnown RBP8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 MTHFSDQ2M296 383 aaKnown RBP8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 ALDH1L2Q3SY69 923 aa8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 BRINP3Q76B58 766 aa8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 LTV1Q96GA3 475 aaPredicted RBP8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 LAS1LQ9Y4W2 734 aaKnown RBP8.38□□□□□ -1.07
NPIPA1-204ENST00000534720 SPATA31A3Q5VYP0 1347 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 DDX17Q92841 729 aaKnown RBP8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
NPIPA1-204ENST00000534720 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms