RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 EMILIN1Q9Y6C2 1016 aa18.46■□□□□ 0.55
CAPN1-228ENST00000534373 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
CAPN1-228ENST00000534373 MEGF6O75095 1541 aa18.45■□□□□ 0.54
CAPN1-228ENST00000534373 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
CAPN1-228ENST00000534373 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
CAPN1-228ENST00000534373 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
CAPN1-228ENST00000534373 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
CAPN1-228ENST00000534373 PANK3Q9H999 370 aa18.44■□□□□ 0.54
CAPN1-228ENST00000534373 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-228ENST00000534373 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
CAPN1-228ENST00000534373 BTAF1O14981 1849 aa18.43■□□□□ 0.54
CAPN1-228ENST00000534373 SYTL4Q96C24 671 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-228ENST00000534373 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-228ENST00000534373 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
CAPN1-228ENST00000534373 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
CAPN1-228ENST00000534373 NSD2O96028 1365 aa18.41■□□□□ 0.54
CAPN1-228ENST00000534373 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
CAPN1-228ENST00000534373 LRRC4BQ9NT99 713 aa18.4■□□□□ 0.54
CAPN1-228ENST00000534373 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
CAPN1-228ENST00000534373 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.54
CAPN1-228ENST00000534373 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-228ENST00000534373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■□□□ 11.9
CAPN1-228ENST00000534373 SHANK3Q9BYB0 1731 aa18.39■□□□□ 0.53
CAPN1-228ENST00000534373 ANKRD26Q9UPS8 1709 aa18.39■□□□□ 0.53
CAPN1-228ENST00000534373 CASZ1Q86V15 1759 aa18.39■□□□□ 0.53
CAPN1-228ENST00000534373 EYA1Q99502 592 aa18.38■□□□□ 0.53
CAPN1-228ENST00000534373 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
CAPN1-228ENST00000534373 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
CAPN1-228ENST00000534373 CYP27B1O15528 508 aa18.36■□□□□ 0.53
CAPN1-228ENST00000534373 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
CAPN1-228ENST00000534373 PAPPAQ13219 1627 aa18.36■□□□□ 0.53
CAPN1-228ENST00000534373 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
CAPN1-228ENST00000534373 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
CAPN1-228ENST00000534373 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
CAPN1-228ENST00000534373 PTGER2P43116 358 aa18.35■□□□□ 0.53
CAPN1-228ENST00000534373 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-228ENST00000534373 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-228ENST00000534373 SLC16A10Q8TF71 515 aa18.35■□□□□ 0.53
CAPN1-228ENST00000534373 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
CAPN1-228ENST00000534373 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
CAPN1-228ENST00000534373 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
CAPN1-228ENST00000534373 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
CAPN1-228ENST00000534373 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-228ENST00000534373 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
CAPN1-228ENST00000534373 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-228ENST00000534373 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
CAPN1-228ENST00000534373 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-228ENST00000534373 SGIP1Q9BQI5 828 aa18.31■□□□□ 0.52
CAPN1-228ENST00000534373 TFCP2L1Q9NZI6 479 aa18.31■□□□□ 0.52
CAPN1-228ENST00000534373 LY75O60449 1722 aa18.31■□□□□ 0.52
CAPN1-228ENST00000534373 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
CAPN1-228ENST00000534373 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
CAPN1-228ENST00000534373 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
CAPN1-228ENST00000534373 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CAPN1-228ENST00000534373 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-228ENST00000534373 KCNQ4P56696 695 aa18.28■□□□□ 0.52
CAPN1-228ENST00000534373 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
CAPN1-228ENST00000534373 QSER1Q2KHR3 1735 aa18.27■□□□□ 0.52
CAPN1-228ENST00000534373 PHKG2P15735 406 aa18.27■□□□□ 0.52
CAPN1-228ENST00000534373 PALLDQ8WX93 1383 aa18.27■□□□□ 0.51
CAPN1-228ENST00000534373 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-228ENST00000534373 PIGBQ92521 554 aa18.26■□□□□ 0.51
CAPN1-228ENST00000534373 ARXQ96QS3 562 aa18.26■□□□□ 0.51
CAPN1-228ENST00000534373 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
CAPN1-228ENST00000534373 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
CAPN1-228ENST00000534373 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-228ENST00000534373 SYT17Q9BSW7 474 aa18.25■□□□□ 0.51
CAPN1-228ENST00000534373 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
CAPN1-228ENST00000534373 FHDC1Q9C0D6 1143 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-228ENST00000534373 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
CAPN1-228ENST00000534373 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
CAPN1-228ENST00000534373 POLD1P28340 1107 aa18.23■□□□□ 0.51
CAPN1-228ENST00000534373 ITGB4P16144 1822 aa18.22■□□□□ 0.51
CAPN1-228ENST00000534373 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
CAPN1-228ENST00000534373 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
CAPN1-228ENST00000534373 IL13P35225 146 aa18.21■□□□□ 0.51
CAPN1-228ENST00000534373 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
CAPN1-228ENST00000534373 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
CAPN1-228ENST00000534373 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-228ENST00000534373 KDRP35968 1356 aa18.19■□□□□ 0.5
CAPN1-228ENST00000534373 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
CAPN1-228ENST00000534373 MTHFSP49914 203 aa18.19■□□□□ 0.5
CAPN1-228ENST00000534373 SIK1P57059 783 aa18.19■□□□□ 0.5
CAPN1-228ENST00000534373 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
CAPN1-228ENST00000534373 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
CAPN1-228ENST00000534373 MSH5O43196 834 aa18.18■□□□□ 0.5
CAPN1-228ENST00000534373 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
CAPN1-228ENST00000534373 C5P01031 1676 aa18.18■□□□□ 0.5
CAPN1-228ENST00000534373 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-228ENST00000534373 AK7Q96M32 723 aa18.17■□□□□ 0.5
CAPN1-228ENST00000534373 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
CAPN1-228ENST00000534373 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
CAPN1-228ENST00000534373 C1orf141Q5JVX7 400 aa18.16■□□□□ 0.5
CAPN1-228ENST00000534373 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
CAPN1-228ENST00000534373 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
CAPN1-228ENST00000534373 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
CAPN1-228ENST00000534373 YY1P25490 414 aa18.15■□□□□ 0.5
CAPN1-228ENST00000534373 ATP6V1AP38606 617 aa18.15■□□□□ 0.5
CAPN1-228ENST00000534373 SSFA2P28290 1259 aa18.14■□□□□ 0.49
CAPN1-228ENST00000534373 CABP4P57796 275 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms