RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 F6X3S4 739 aa20.62■□□□□ 0.89
PHRF1-206ENST00000534320 CWC22Q9HCG8 908 aaKnown RBP20.62■□□□□ 0.89
PHRF1-206ENST00000534320 CCDC158Q5M9N0 1113 aa20.62■□□□□ 0.89
PHRF1-206ENST00000534320 MRE11P49959 708 aa20.61■□□□□ 0.89
PHRF1-206ENST00000534320 PTPRCP08575 1304 aa20.61■□□□□ 0.89
PHRF1-206ENST00000534320 CNNM1Q9NRU3 951 aa20.6■□□□□ 0.89
PHRF1-206ENST00000534320 IGHDP01880 384 aa20.6■□□□□ 0.89
PHRF1-206ENST00000534320 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
PHRF1-206ENST00000534320 CYP46A1Q9Y6A2 500 aa20.6■□□□□ 0.89
PHRF1-206ENST00000534320 SMARCA5O60264 1052 aaPredicted RBP20.59■□□□□ 0.89
PHRF1-206ENST00000534320 TTC39AQ5SRH9 613 aa20.59■□□□□ 0.89
PHRF1-206ENST00000534320 ADGBQ8N7X0 1667 aa20.59■□□□□ 0.89
PHRF1-206ENST00000534320 CCDC73Q6ZRK6 1079 aa20.59■□□□□ 0.89
PHRF1-206ENST00000534320 TTC21AQ8NDW8 1320 aa20.59■□□□□ 0.89
PHRF1-206ENST00000534320 MBD3O95983 291 aa20.59■□□□□ 0.89
PHRF1-206ENST00000534320 PDCP20941 246 aa20.59■□□□□ 0.89
PHRF1-206ENST00000534320 NUTM1Q86Y26 1132 aa20.58■□□□□ 0.89
PHRF1-206ENST00000534320 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.89
PHRF1-206ENST00000534320 MX1P20591 662 aa20.58■□□□□ 0.89
PHRF1-206ENST00000534320 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.89
PHRF1-206ENST00000534320 KIF1BPQ96EK5 621 aa20.58■□□□□ 0.89
PHRF1-206ENST00000534320 TPD52L1Q16890 204 aaPredicted RBP20.58■□□□□ 0.89
PHRF1-206ENST00000534320 CAVIN1Q6NZI2 390 aaKnown RBP20.58■□□□□ 0.88
PHRF1-206ENST00000534320 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
PHRF1-206ENST00000534320 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 SASS6Q6UVJ0 657 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 RAB11FIP3O75154 756 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 FLIIQ13045 1269 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 ARHGEF5Q12774 1597 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 PLEKHH1Q9ULM0 1364 aa20.57■□□□□ 0.88
PHRF1-206ENST00000534320 CWC27Q6UX04 472 aaKnown RBP20.56■□□□□ 0.88
PHRF1-206ENST00000534320 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
PHRF1-206ENST00000534320 CCDC66A2RUB6 948 aa20.56■□□□□ 0.88
PHRF1-206ENST00000534320 LARP1Q6PKG0 1096 aaKnown RBP20.56■□□□□ 0.88
PHRF1-206ENST00000534320 CIZ1Q9ULV3 898 aaPredicted RBP20.56■□□□□ 0.88
PHRF1-206ENST00000534320 A0A1W2PP64 1363 aa20.55■□□□□ 0.88
PHRF1-206ENST00000534320 KRT28Q7Z3Y7 464 aa20.55■□□□□ 0.88
PHRF1-206ENST00000534320 VPS53Q5VIR6 699 aa20.55■□□□□ 0.88
PHRF1-206ENST00000534320 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
PHRF1-206ENST00000534320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.55■□□□□ 0.88
PHRF1-206ENST00000534320 NASPP49321 788 aaPredicted RBP20.55■□□□□ 0.88
PHRF1-206ENST00000534320 ARHGAP45Q92619 1136 aa20.54■□□□□ 0.88
PHRF1-206ENST00000534320 DBF4Q9UBU7 674 aaPredicted RBP20.54■□□□□ 0.88
PHRF1-206ENST00000534320 ZRANB1Q9UGI0 708 aa20.54■□□□□ 0.88
PHRF1-206ENST00000534320 ABCC1P33527 1531 aa20.54■□□□□ 0.88
PHRF1-206ENST00000534320 YTHDC2Q9H6S0 1430 aaKnown RBP20.54■□□□□ 0.88
PHRF1-206ENST00000534320 LRRFIP2Q9Y608 721 aaKnown RBP20.54■□□□□ 0.88
PHRF1-206ENST00000534320 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.54■□□□□ 0.883e-7■■■□□ 16.9
PHRF1-206ENST00000534320 ABCA8O94911 1581 aa20.54■□□□□ 0.88
PHRF1-206ENST00000534320 TPM2P07951 284 aa20.53■□□□□ 0.88
PHRF1-206ENST00000534320 ANKRD1Q15327 319 aa20.53■□□□□ 0.88
PHRF1-206ENST00000534320 CCDC70Q6NSX1 233 aa20.53■□□□□ 0.88
PHRF1-206ENST00000534320 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
PHRF1-206ENST00000534320 HOOK1Q9UJC3 728 aaKnown RBP20.53■□□□□ 0.88
PHRF1-206ENST00000534320 CCAR2Q8N163 923 aaKnown RBP20.53■□□□□ 0.88
PHRF1-206ENST00000534320 NUTM2BA6NNL0 878 aaPredicted RBP20.53■□□□□ 0.88
PHRF1-206ENST00000534320 NUTM2EB1AL46 878 aaPredicted RBP20.53■□□□□ 0.88
PHRF1-206ENST00000534320 NUTM2AQ8IVF1 878 aaPredicted RBP20.53■□□□□ 0.88
PHRF1-206ENST00000534320 PES1O00541 588 aaKnown RBP20.53■□□□□ 0.88
PHRF1-206ENST00000534320 CEP126Q9P2H0 1117 aa20.53■□□□□ 0.88
PHRF1-206ENST00000534320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.52■□□□□ 0.882e-6■■■■□ 19.7
PHRF1-206ENST00000534320 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
PHRF1-206ENST00000534320 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
PHRF1-206ENST00000534320 TRIM34Q9BYJ4 488 aa20.52■□□□□ 0.88
PHRF1-206ENST00000534320 DHX16O60231 1041 aaKnown RBP20.52■□□□□ 0.87
PHRF1-206ENST00000534320 GLRX3O76003 335 aaKnown RBP20.52■□□□□ 0.87
PHRF1-206ENST00000534320 SART3Q15020 963 aaKnown RBP20.52■□□□□ 0.87
PHRF1-206ENST00000534320 RAD21O60216 631 aa20.51■□□□□ 0.87
PHRF1-206ENST00000534320 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
PHRF1-206ENST00000534320 NPATQ14207 1427 aa20.51■□□□□ 0.87
PHRF1-206ENST00000534320 WDR33Q9C0J8 1336 aaKnown RBP20.51■□□□□ 0.87
PHRF1-206ENST00000534320 EIF4A2Q14240 407 aaKnown RBP20.51■□□□□ 0.87
PHRF1-206ENST00000534320 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
PHRF1-206ENST00000534320 FIBPO43427 364 aa20.51■□□□□ 0.87
PHRF1-206ENST00000534320 RNF214Q8ND24 703 aa20.51■□□□□ 0.87
PHRF1-206ENST00000534320 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
PHRF1-206ENST00000534320 PCDHB15Q9Y5E8 787 aa20.5■□□□□ 0.87
PHRF1-206ENST00000534320 HDAC1Q13547 482 aaPredicted RBP20.5■□□□□ 0.87
PHRF1-206ENST00000534320 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
PHRF1-206ENST00000534320 MCM4P33991 863 aa20.5■□□□□ 0.87
PHRF1-206ENST00000534320 BLOC1S2Q6QNY1 142 aa20.5■□□□□ 0.87
PHRF1-206ENST00000534320 MYD88Q99836 296 aa20.5■□□□□ 0.87
PHRF1-206ENST00000534320 JAKMIP1Q96N16 626 aaKnown RBP20.49■□□□□ 0.87
PHRF1-206ENST00000534320 STARD3NLO95772 234 aa20.49■□□□□ 0.87
PHRF1-206ENST00000534320 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.873e-6■□□□□ 10.7
PHRF1-206ENST00000534320 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
PHRF1-206ENST00000534320 LETM1O95202 739 aaPredicted RBP20.49■□□□□ 0.87
PHRF1-206ENST00000534320 BMP2KLQ5H9B9 411 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 ZNF592Q92610 1267 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 PDRG1Q9NUG6 133 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 CWC15Q9P013 229 aaKnown RBP20.48■□□□□ 0.87
PHRF1-206ENST00000534320 STK3Q13188 491 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 ANKRD24Q8TF21 1146 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 ARGLU1Q9NWB6 273 aaPredicted RBP20.48■□□□□ 0.87
PHRF1-206ENST00000534320 KDM6BO15054 1643 aa20.48■□□□□ 0.87
PHRF1-206ENST00000534320 GNL3LQ9NVN8 582 aaKnown RBP20.47■□□□□ 0.87
PHRF1-206ENST00000534320 TMOD3Q9NYL9 352 aa20.47■□□□□ 0.87
PHRF1-206ENST00000534320 TPM1P09493 284 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms