RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
CCDC180-213ENST00000534189 IL2RBP14784 551 aa22.49■■□□□ 1.19
CCDC180-213ENST00000534189 FBLN1P23142 703 aa22.49■■□□□ 1.19
CCDC180-213ENST00000534189 HOXC9P31274 260 aa22.49■■□□□ 1.19
CCDC180-213ENST00000534189 WNK3Q9BYP7 1800 aa22.49■■□□□ 1.19
CCDC180-213ENST00000534189 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
CCDC180-213ENST00000534189 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
CCDC180-213ENST00000534189 RTL1A6NKG5 1358 aa22.46■■□□□ 1.19
CCDC180-213ENST00000534189 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
CCDC180-213ENST00000534189 HSPA6P17066 643 aa22.44■■□□□ 1.18
CCDC180-213ENST00000534189 ZNF827Q17R98 1081 aa22.44■■□□□ 1.18
CCDC180-213ENST00000534189 TNS2Q63HR2 1409 aa22.44■■□□□ 1.18
CCDC180-213ENST00000534189 SLC16A10Q8TF71 515 aa22.44■■□□□ 1.18
CCDC180-213ENST00000534189 KIF20BQ96Q89 1820 aa22.43■■□□□ 1.18
CCDC180-213ENST00000534189 COL24A1Q17RW2 1714 aa22.43■■□□□ 1.18
CCDC180-213ENST00000534189 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
CCDC180-213ENST00000534189 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
CCDC180-213ENST00000534189 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
CCDC180-213ENST00000534189 FAM208AQ9UK61 1670 aaKnown RBP22.41■■□□□ 1.18
CCDC180-213ENST00000534189 NHSQ6T4R5 1651 aa22.4■■□□□ 1.18
CCDC180-213ENST00000534189 GRIN3BO60391 1043 aa22.4■■□□□ 1.18
CCDC180-213ENST00000534189 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
CCDC180-213ENST00000534189 YBX3P16989 372 aaKnown RBP eCLIP22.39■■□□□ 1.17
CCDC180-213ENST00000534189 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.17
CCDC180-213ENST00000534189 ATP10DQ9P241 1426 aa22.39■■□□□ 1.17
CCDC180-213ENST00000534189 FLT4P35916 1363 aa22.38■■□□□ 1.17
CCDC180-213ENST00000534189 POLD1P28340 1107 aa22.38■■□□□ 1.17
CCDC180-213ENST00000534189 KLHL34Q8N239 644 aa22.38■■□□□ 1.17
CCDC180-213ENST00000534189 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
CCDC180-213ENST00000534189 PANK3Q9H999 370 aa22.38■■□□□ 1.17
CCDC180-213ENST00000534189 INSRP06213 1382 aa22.38■■□□□ 1.17
CCDC180-213ENST00000534189 HSP90AB2PQ58FF8 381 aa22.37■■□□□ 1.17
CCDC180-213ENST00000534189 NBPF6Q5VWK0 638 aa22.35■■□□□ 1.17
CCDC180-213ENST00000534189 ACSBG1Q96GR2 724 aa22.35■■□□□ 1.17
CCDC180-213ENST00000534189 NBPF4Q96M43 638 aa22.35■■□□□ 1.17
CCDC180-213ENST00000534189 QSER1Q2KHR3 1735 aa22.34■■□□□ 1.17
CCDC180-213ENST00000534189 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
CCDC180-213ENST00000534189 DDX54Q8TDD1 881 aaKnown RBP22.34■■□□□ 1.17
CCDC180-213ENST00000534189 GPBP1L1Q9HC44 474 aaPredicted RBP22.34■■□□□ 1.17
CCDC180-213ENST00000534189 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
CCDC180-213ENST00000534189 PNPLA7Q6ZV29 1317 aa22.33■■□□□ 1.17
CCDC180-213ENST00000534189 RAPGEF4Q8WZA2 1011 aa22.33■■□□□ 1.17
CCDC180-213ENST00000534189 ZCRB1Q8TBF4 217 aaKnown RBP22.32■■□□□ 1.16
CCDC180-213ENST00000534189 ADCY9O60503 1353 aa22.31■■□□□ 1.16
CCDC180-213ENST00000534189 BTAF1O14981 1849 aa22.3■■□□□ 1.16
CCDC180-213ENST00000534189 USHBP1Q8N6Y0 703 aa22.3■■□□□ 1.16
CCDC180-213ENST00000534189 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
CCDC180-213ENST00000534189 TATP17735 454 aaPredicted RBP22.29■■□□□ 1.16
CCDC180-213ENST00000534189 RGPD2P0DJD1 1756 aa22.29■■□□□ 1.16
CCDC180-213ENST00000534189 NSD2O96028 1365 aa22.28■■□□□ 1.16
CCDC180-213ENST00000534189 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
CCDC180-213ENST00000534189 SLC27A3Q5K4L6 730 aa22.28■■□□□ 1.16
CCDC180-213ENST00000534189 POLKQ9UBT6 870 aa22.28■■□□□ 1.16
CCDC180-213ENST00000534189 KNSTRNQ9Y448 316 aa22.28■■□□□ 1.16
CCDC180-213ENST00000534189 KIF7Q2M1P5 1343 aa22.27■■□□□ 1.16
CCDC180-213ENST00000534189 MEGF6O75095 1541 aa22.26■■□□□ 1.15
CCDC180-213ENST00000534189 KAT6BQ8WYB5 2073 aa22.26■■□□□ 1.15
CCDC180-213ENST00000534189 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
CCDC180-213ENST00000534189 MORC1Q86VD1 984 aa22.24■■□□□ 1.15
CCDC180-213ENST00000534189 ANKRD26Q9UPS8 1709 aa22.23■■□□□ 1.15
CCDC180-213ENST00000534189 SYTL4Q96C24 671 aaPredicted RBP22.23■■□□□ 1.15
CCDC180-213ENST00000534189 TFCP2L1Q9NZI6 479 aa22.23■■□□□ 1.15
CCDC180-213ENST00000534189 DNAJC5GQ8N7S2 189 aa22.22■■□□□ 1.15
CCDC180-213ENST00000534189 TUBGCP6Q96RT7 1819 aa22.22■■□□□ 1.15
CCDC180-213ENST00000534189 PRIM1P49642 420 aaKnown RBP22.21■■□□□ 1.15
CCDC180-213ENST00000534189 KIF3CO14782 793 aa22.2■■□□□ 1.14
CCDC180-213ENST00000534189 ZNF526Q8TF50 670 aaPredicted RBP22.2■■□□□ 1.14
CCDC180-213ENST00000534189 EYA1Q99502 592 aa22.2■■□□□ 1.14
CCDC180-213ENST00000534189 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
CCDC180-213ENST00000534189 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
CCDC180-213ENST00000534189 APLP1P51693 650 aa22.18■■□□□ 1.14
CCDC180-213ENST00000534189 EIF4A2Q14240 407 aaKnown RBP22.18■■□□□ 1.14
CCDC180-213ENST00000534189 SPG7Q9UQ90 795 aa22.17■■□□□ 1.14
CCDC180-213ENST00000534189 CD2APQ9Y5K6 639 aa22.17■■□□□ 1.14
CCDC180-213ENST00000534189 NCAPD2Q15021 1401 aa22.16■■□□□ 1.14
CCDC180-213ENST00000534189 KCNQ4P56696 695 aa22.16■■□□□ 1.14
CCDC180-213ENST00000534189 AMER1Q5JTC6 1135 aaPredicted RBP22.16■■□□□ 1.14
CCDC180-213ENST00000534189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCDC180-213ENST00000534189 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
CCDC180-213ENST00000534189 CYP27B1O15528 508 aa22.13■■□□□ 1.13
CCDC180-213ENST00000534189 PER1O15534 1290 aaPredicted RBP22.12■■□□□ 1.13
CCDC180-213ENST00000534189 DOT1LQ8TEK3 1739 aa22.11■■□□□ 1.13
CCDC180-213ENST00000534189 COL13A1Q5TAT6 717 aaPredicted RBP22.11■■□□□ 1.13
CCDC180-213ENST00000534189 IGSF1Q8N6C5 1336 aa22.1■■□□□ 1.13
CCDC180-213ENST00000534189 LY75O60449 1722 aa22.1■■□□□ 1.13
CCDC180-213ENST00000534189 NKX1-1Q15270 411 aaPredicted RBP22.09■■□□□ 1.13
CCDC180-213ENST00000534189 PLEKHG2Q9H7P9 1386 aa22.09■■□□□ 1.13
CCDC180-213ENST00000534189 CC2D1BQ5T0F9 858 aaKnown RBP22.08■■□□□ 1.13
CCDC180-213ENST00000534189 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
CCDC180-213ENST00000534189 IFNL2Q8IZJ0 200 aa22.08■■□□□ 1.13
CCDC180-213ENST00000534189 PKD1L3Q7Z443 1732 aa22.08■■□□□ 1.12
CCDC180-213ENST00000534189 HMGB2P26583 209 aaKnown RBP22.07■■□□□ 1.12
CCDC180-213ENST00000534189 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
CCDC180-213ENST00000534189 MSH5O43196 834 aa22.06■■□□□ 1.12
CCDC180-213ENST00000534189 TOMM70O94826 608 aa22.06■■□□□ 1.12
CCDC180-213ENST00000534189 CCNL1Q9UK58 526 aaPredicted RBP22.06■■□□□ 1.12
CCDC180-213ENST00000534189 PHKG2P15735 406 aa22.05■■□□□ 1.12
CCDC180-213ENST00000534189 MTHFSP49914 203 aa22.05■■□□□ 1.12
CCDC180-213ENST00000534189 PLEKHO1Q53GL0 409 aaPredicted RBP22.05■■□□□ 1.12
CCDC180-213ENST00000534189 NPC1L1Q9UHC9 1359 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms