RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
RTL1-201ENST00000534062 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
RTL1-201ENST00000534062 GNAI1P63096 354 aa12.28□□□□□ -0.44
RTL1-201ENST00000534062 CLUAP1Q96AJ1 413 aa12.28□□□□□ -0.44
RTL1-201ENST00000534062 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
RTL1-201ENST00000534062 BRPF3Q9ULD4 1205 aa12.28□□□□□ -0.44
RTL1-201ENST00000534062 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
RTL1-201ENST00000534062 PEAK1Q9H792 1746 aa12.27□□□□□ -0.44
RTL1-201ENST00000534062 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.44
RTL1-201ENST00000534062 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
RTL1-201ENST00000534062 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
RTL1-201ENST00000534062 TSPYL4Q9UJ04 414 aa12.26□□□□□ -0.45
RTL1-201ENST00000534062 ERBB3P21860 1342 aa12.26□□□□□ -0.45
RTL1-201ENST00000534062 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
RTL1-201ENST00000534062 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
RTL1-201ENST00000534062 TEFQ10587 303 aa12.26□□□□□ -0.45
RTL1-201ENST00000534062 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
RTL1-201ENST00000534062 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
RTL1-201ENST00000534062 IQSEC2Q5JU85 1478 aa12.25□□□□□ -0.45
RTL1-201ENST00000534062 IPO9Q96P70 1041 aaKnown RBP12.25□□□□□ -0.45
RTL1-201ENST00000534062 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
RTL1-201ENST00000534062 PPP4R2Q9NY27 417 aa12.25□□□□□ -0.45
RTL1-201ENST00000534062 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
RTL1-201ENST00000534062 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
RTL1-201ENST00000534062 PXDNQ92626 1479 aa12.25□□□□□ -0.45
RTL1-201ENST00000534062 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
RTL1-201ENST00000534062 C20orf194Q5TEA3 1177 aa12.24□□□□□ -0.45
RTL1-201ENST00000534062 CRBNQ96SW2 442 aa12.24□□□□□ -0.45
RTL1-201ENST00000534062 PHF23Q9BUL5 403 aaPredicted RBP12.24□□□□□ -0.45
RTL1-201ENST00000534062 LTN1O94822 1766 aa12.23□□□□□ -0.45
RTL1-201ENST00000534062 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
RTL1-201ENST00000534062 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
RTL1-201ENST00000534062 DDX54Q8TDD1 881 aaKnown RBP12.23□□□□□ -0.45
RTL1-201ENST00000534062 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
RTL1-201ENST00000534062 NFAT5O94916 1531 aa12.23□□□□□ -0.45
RTL1-201ENST00000534062 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
RTL1-201ENST00000534062 TRMT2AQ8IZ69 625 aaKnown RBP12.22□□□□□ -0.45
RTL1-201ENST00000534062 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
RTL1-201ENST00000534062 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
RTL1-201ENST00000534062 IL16Q14005 1332 aa12.22□□□□□ -0.45
RTL1-201ENST00000534062 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
RTL1-201ENST00000534062 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
RTL1-201ENST00000534062 PANK1Q8TE04 598 aa12.22□□□□□ -0.45
RTL1-201ENST00000534062 AMOTQ4VCS5 1084 aa12.21□□□□□ -0.45
RTL1-201ENST00000534062 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.45
RTL1-201ENST00000534062 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
RTL1-201ENST00000534062 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
RTL1-201ENST00000534062 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
RTL1-201ENST00000534062 MAP3K5Q99683 1374 aa12.21□□□□□ -0.46
RTL1-201ENST00000534062 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
RTL1-201ENST00000534062 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
RTL1-201ENST00000534062 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
RTL1-201ENST00000534062 KDRP35968 1356 aa12.2□□□□□ -0.46
RTL1-201ENST00000534062 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
RTL1-201ENST00000534062 CERKQ8TCT0 537 aa12.19□□□□□ -0.46
RTL1-201ENST00000534062 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
RTL1-201ENST00000534062 SLIT3O75094 1523 aa12.19□□□□□ -0.46
RTL1-201ENST00000534062 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
RTL1-201ENST00000534062 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
RTL1-201ENST00000534062 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
RTL1-201ENST00000534062 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
RTL1-201ENST00000534062 NGLY1Q96IV0 654 aa12.18□□□□□ -0.46
RTL1-201ENST00000534062 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
RTL1-201ENST00000534062 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
RTL1-201ENST00000534062 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
RTL1-201ENST00000534062 ZKSCAN2Q63HK3 967 aa12.18□□□□□ -0.46
RTL1-201ENST00000534062 TNNQ9UQP3 1299 aa12.18□□□□□ -0.46
RTL1-201ENST00000534062 LTBP4Q8N2S1 1624 aa12.18□□□□□ -0.46
RTL1-201ENST00000534062 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
RTL1-201ENST00000534062 WDR17Q8IZU2 1322 aa12.17□□□□□ -0.46
RTL1-201ENST00000534062 BTBD11A6QL63 1104 aa12.17□□□□□ -0.46
RTL1-201ENST00000534062 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
RTL1-201ENST00000534062 NOB1Q9ULX3 412 aaKnown RBP12.17□□□□□ -0.46
RTL1-201ENST00000534062 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
RTL1-201ENST00000534062 ALS2Q96Q42 1657 aa12.17□□□□□ -0.46
RTL1-201ENST00000534062 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
RTL1-201ENST00000534062 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
RTL1-201ENST00000534062 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
RTL1-201ENST00000534062 IL2RBP14784 551 aa12.16□□□□□ -0.46
RTL1-201ENST00000534062 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
RTL1-201ENST00000534062 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
RTL1-201ENST00000534062 CHL1O00533 1208 aa12.15□□□□□ -0.46
RTL1-201ENST00000534062 ZCRB1Q8TBF4 217 aaKnown RBP12.15□□□□□ -0.46
RTL1-201ENST00000534062 CPDO75976 1380 aa12.15□□□□□ -0.46
RTL1-201ENST00000534062 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
RTL1-201ENST00000534062 VAMP4O75379 141 aa12.15□□□□□ -0.46
RTL1-201ENST00000534062 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
RTL1-201ENST00000534062 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
RTL1-201ENST00000534062 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.47
RTL1-201ENST00000534062 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.47
RTL1-201ENST00000534062 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 RGPD5Q99666 1765 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 CABP4P57796 275 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 RGPD2P0DJD1 1756 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
RTL1-201ENST00000534062 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
RTL1-201ENST00000534062 NFATC2IPQ8NCF5 419 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms