RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
CMTM1-219ENST00000533953 EZH2Q15910 746 aaKnown RBP18.12■□□□□ 0.49
CMTM1-219ENST00000533953 BAG6P46379 1132 aa18.11■□□□□ 0.49
CMTM1-219ENST00000533953 IGSF1Q8N6C5 1336 aa18.11■□□□□ 0.49
CMTM1-219ENST00000533953 CYP27B1O15528 508 aa18.1■□□□□ 0.49
CMTM1-219ENST00000533953 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
CMTM1-219ENST00000533953 DIAPH1O60610 1272 aaKnown RBP18.09■□□□□ 0.49
CMTM1-219ENST00000533953 HMOX1P09601 288 aa18.09■□□□□ 0.49
CMTM1-219ENST00000533953 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
CMTM1-219ENST00000533953 NCAPD2Q15021 1401 aa18.08■□□□□ 0.49
CMTM1-219ENST00000533953 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.48
CMTM1-219ENST00000533953 CAMKK2Q96RR4 588 aa18.08■□□□□ 0.48
CMTM1-219ENST00000533953 PRIM1P49642 420 aaKnown RBP18.07■□□□□ 0.48
CMTM1-219ENST00000533953 U2SURPO15042 1029 aaKnown RBP18.06■□□□□ 0.48
CMTM1-219ENST00000533953 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
CMTM1-219ENST00000533953 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
CMTM1-219ENST00000533953 BCL9O00512 1426 aa18.05■□□□□ 0.48
CMTM1-219ENST00000533953 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
CMTM1-219ENST00000533953 PCDH11XQ9BZA7 1347 aa18.03■□□□□ 0.48
CMTM1-219ENST00000533953 PCDH11YQ9BZA8 1340 aa18.03■□□□□ 0.48
CMTM1-219ENST00000533953 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
CMTM1-219ENST00000533953 PROM2Q8N271 834 aa18.03■□□□□ 0.48
CMTM1-219ENST00000533953 CFAP53Q96M91 514 aa18.02■□□□□ 0.48
CMTM1-219ENST00000533953 TNS1Q9HBL0 1735 aaKnown RBP18.02■□□□□ 0.48
CMTM1-219ENST00000533953 RGPD1P0DJD0 1748 aa18.01■□□□□ 0.47
CMTM1-219ENST00000533953 PHKG2P15735 406 aa18.01■□□□□ 0.47
CMTM1-219ENST00000533953 PLEKHO1Q53GL0 409 aaPredicted RBP18.01■□□□□ 0.47
CMTM1-219ENST00000533953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.47
CMTM1-219ENST00000533953 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
CMTM1-219ENST00000533953 ZNF530Q6P9A1 599 aaPredicted RBP18■□□□□ 0.47
CMTM1-219ENST00000533953 SHANK3Q9BYB0 1731 aa18■□□□□ 0.47
CMTM1-219ENST00000533953 PLSCR1O15162 318 aa17.99■□□□□ 0.47
CMTM1-219ENST00000533953 KCNQ4P56696 695 aa17.99■□□□□ 0.47
CMTM1-219ENST00000533953 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
CMTM1-219ENST00000533953 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
CMTM1-219ENST00000533953 KDRP35968 1356 aa17.99■□□□□ 0.47
CMTM1-219ENST00000533953 SBF2Q86WG5 1849 aa17.98■□□□□ 0.47
CMTM1-219ENST00000533953 NKX1-1Q15270 411 aaPredicted RBP17.98■□□□□ 0.47
CMTM1-219ENST00000533953 RALBP1Q15311 655 aa17.98■□□□□ 0.47
CMTM1-219ENST00000533953 U2AF1L5P0DN76 240 aaPredicted RBP17.97■□□□□ 0.47
CMTM1-219ENST00000533953 U2AF1Q01081 240 aaKnown RBP eCLIP17.97■□□□□ 0.47
CMTM1-219ENST00000533953 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
CMTM1-219ENST00000533953 R3HDM1Q15032 1099 aaKnown RBP17.96■□□□□ 0.47
CMTM1-219ENST00000533953 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
CMTM1-219ENST00000533953 AMOTQ4VCS5 1084 aa17.96■□□□□ 0.47
CMTM1-219ENST00000533953 PIGBQ92521 554 aa17.96■□□□□ 0.47
CMTM1-219ENST00000533953 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
CMTM1-219ENST00000533953 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
CMTM1-219ENST00000533953 KAT6BQ8WYB5 2073 aa17.95■□□□□ 0.46
CMTM1-219ENST00000533953 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
CMTM1-219ENST00000533953 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
CMTM1-219ENST00000533953 PRKRIP1Q9H875 184 aaPredicted RBP17.94■□□□□ 0.46
CMTM1-219ENST00000533953 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
CMTM1-219ENST00000533953 PKD1L3Q7Z443 1732 aa17.93■□□□□ 0.46
CMTM1-219ENST00000533953 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
CMTM1-219ENST00000533953 LGR6Q9HBX8 967 aa17.93■□□□□ 0.46
CMTM1-219ENST00000533953 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
CMTM1-219ENST00000533953 NHSQ6T4R5 1651 aa17.93■□□□□ 0.46
CMTM1-219ENST00000533953 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
CMTM1-219ENST00000533953 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
CMTM1-219ENST00000533953 ASAP1Q9ULH1 1129 aa17.91■□□□□ 0.46
CMTM1-219ENST00000533953 DOT1LQ8TEK3 1739 aa17.91■□□□□ 0.46
CMTM1-219ENST00000533953 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
CMTM1-219ENST00000533953 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
CMTM1-219ENST00000533953 BTAF1O14981 1849 aa17.89■□□□□ 0.45
CMTM1-219ENST00000533953 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
CMTM1-219ENST00000533953 NBPF14Q5TI25 921 aa17.89■□□□□ 0.45
CMTM1-219ENST00000533953 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
CMTM1-219ENST00000533953 CABP4P57796 275 aa17.88■□□□□ 0.45
CMTM1-219ENST00000533953 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
CMTM1-219ENST00000533953 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
CMTM1-219ENST00000533953 TOGARAM1Q9Y4F4 1720 aa17.88■□□□□ 0.45
CMTM1-219ENST00000533953 ERVV-2B6SEH9 535 aa17.87■□□□□ 0.45
CMTM1-219ENST00000533953 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
CMTM1-219ENST00000533953 FCHSD2O94868 740 aa17.87■□□□□ 0.45
CMTM1-219ENST00000533953 CCDC184Q52MB2 194 aa17.87■□□□□ 0.45
CMTM1-219ENST00000533953 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
CMTM1-219ENST00000533953 CCNL1Q9UK58 526 aaPredicted RBP17.87■□□□□ 0.45
CMTM1-219ENST00000533953 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
CMTM1-219ENST00000533953 PALLDQ8WX93 1383 aa17.86■□□□□ 0.45
CMTM1-219ENST00000533953 PLEKHG2Q9H7P9 1386 aa17.86■□□□□ 0.45
CMTM1-219ENST00000533953 IL17REQ8NFR9 667 aa17.85■□□□□ 0.45
CMTM1-219ENST00000533953 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
CMTM1-219ENST00000533953 RREB1Q92766 1687 aa17.84■□□□□ 0.45
CMTM1-219ENST00000533953 STK32BQ9NY57 414 aa17.84■□□□□ 0.45
CMTM1-219ENST00000533953 SLC15A2Q16348 729 aa17.83■□□□□ 0.44
CMTM1-219ENST00000533953 SLC27A3Q5K4L6 730 aa17.83■□□□□ 0.44
CMTM1-219ENST00000533953 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
CMTM1-219ENST00000533953 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
CMTM1-219ENST00000533953 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.44
CMTM1-219ENST00000533953 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.44
CMTM1-219ENST00000533953 GNAT3A8MTJ3 354 aa17.82■□□□□ 0.44
CMTM1-219ENST00000533953 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
CMTM1-219ENST00000533953 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
CMTM1-219ENST00000533953 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
CMTM1-219ENST00000533953 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
CMTM1-219ENST00000533953 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
CMTM1-219ENST00000533953 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
CMTM1-219ENST00000533953 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
CMTM1-219ENST00000533953 SIK1P57059 783 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms