RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 AEBP1Q8IUX7 1158 aa20.77■□□□□ 0.92
CTTN-215ENST00000533931 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
CTTN-215ENST00000533931 DDB1Q16531 1140 aa20.76■□□□□ 0.91
CTTN-215ENST00000533931 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
CTTN-215ENST00000533931 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
CTTN-215ENST00000533931 PNISRQ8TF01 805 aaKnown RBP20.76■□□□□ 0.91
CTTN-215ENST00000533931 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
CTTN-215ENST00000533931 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
CTTN-215ENST00000533931 EXOC5O00471 708 aa20.74■□□□□ 0.91
CTTN-215ENST00000533931 HMOX1P09601 288 aa20.74■□□□□ 0.91
CTTN-215ENST00000533931 MIER1Q8N108 512 aa20.74■□□□□ 0.91
CTTN-215ENST00000533931 SPG7Q9UQ90 795 aa20.74■□□□□ 0.91
CTTN-215ENST00000533931 PLEKHO1Q53GL0 409 aaPredicted RBP20.73■□□□□ 0.91
CTTN-215ENST00000533931 ZCRB1Q8TBF4 217 aaKnown RBP20.73■□□□□ 0.91
CTTN-215ENST00000533931 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
CTTN-215ENST00000533931 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
CTTN-215ENST00000533931 BCL9O00512 1426 aa20.71■□□□□ 0.91
CTTN-215ENST00000533931 A0A0G2JS52 829 aa20.71■□□□□ 0.91
CTTN-215ENST00000533931 PRKAR2BP31323 418 aa20.71■□□□□ 0.91
CTTN-215ENST00000533931 MYT1Q01538 1121 aa20.71■□□□□ 0.91
CTTN-215ENST00000533931 NEFMP07197 916 aa20.7■□□□□ 0.9
CTTN-215ENST00000533931 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
CTTN-215ENST00000533931 ILDR2Q71H61 639 aa20.7■□□□□ 0.9
CTTN-215ENST00000533931 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
CTTN-215ENST00000533931 KRT27Q7Z3Y8 459 aa20.69■□□□□ 0.9
CTTN-215ENST00000533931 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
CTTN-215ENST00000533931 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
CTTN-215ENST00000533931 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
CTTN-215ENST00000533931 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
CTTN-215ENST00000533931 RUNDC1Q96C34 613 aa20.66■□□□□ 0.9
CTTN-215ENST00000533931 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
CTTN-215ENST00000533931 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
CTTN-215ENST00000533931 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
CTTN-215ENST00000533931 MARCH10Q8NA82 808 aaPredicted RBP20.65■□□□□ 0.9
CTTN-215ENST00000533931 CYP27B1O15528 508 aa20.64■□□□□ 0.89
CTTN-215ENST00000533931 PHKG2P15735 406 aa20.64■□□□□ 0.89
CTTN-215ENST00000533931 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.89
CTTN-215ENST00000533931 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
CTTN-215ENST00000533931 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
CTTN-215ENST00000533931 MTHFSDQ2M296 383 aaKnown RBP20.63■□□□□ 0.89
CTTN-215ENST00000533931 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
CTTN-215ENST00000533931 C1orf141Q5JVX7 400 aa20.63■□□□□ 0.89
CTTN-215ENST00000533931 NCBP3Q53F19 620 aaKnown RBP20.62■□□□□ 0.89
CTTN-215ENST00000533931 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
CTTN-215ENST00000533931 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
CTTN-215ENST00000533931 DDX54Q8TDD1 881 aaKnown RBP20.61■□□□□ 0.89
CTTN-215ENST00000533931 MAP3K5Q99683 1374 aa20.6■□□□□ 0.89
CTTN-215ENST00000533931 NFE2L2Q16236 605 aa20.6■□□□□ 0.89
CTTN-215ENST00000533931 DCAF5Q96JK2 942 aa20.6■□□□□ 0.89
CTTN-215ENST00000533931 ADAMTS7Q9UKP4 1686 aa20.59■□□□□ 0.89
CTTN-215ENST00000533931 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.89
CTTN-215ENST00000533931 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
CTTN-215ENST00000533931 NGEFQ8N5V2 710 aa20.58■□□□□ 0.89
CTTN-215ENST00000533931 LMOD3Q0VAK6 560 aa20.57■□□□□ 0.88
CTTN-215ENST00000533931 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
CTTN-215ENST00000533931 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
CTTN-215ENST00000533931 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
CTTN-215ENST00000533931 ERVV-2B6SEH9 535 aa20.55■□□□□ 0.88
CTTN-215ENST00000533931 MRC1P22897 1456 aa20.55■□□□□ 0.88
CTTN-215ENST00000533931 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
CTTN-215ENST00000533931 NHSQ6T4R5 1651 aa20.54■□□□□ 0.88
CTTN-215ENST00000533931 RTF1Q92541 710 aaKnown RBP20.53■□□□□ 0.88
CTTN-215ENST00000533931 APAF1O14727 1248 aa20.52■□□□□ 0.88
CTTN-215ENST00000533931 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
CTTN-215ENST00000533931 RNMTO43148 476 aaKnown RBP20.51■□□□□ 0.87
CTTN-215ENST00000533931 RIPK4P57078 832 aa20.51■□□□□ 0.87
CTTN-215ENST00000533931 CCDC125Q86Z20 511 aa20.51■□□□□ 0.87
CTTN-215ENST00000533931 BCL11BQ9C0K0 894 aaPredicted RBP20.51■□□□□ 0.87
CTTN-215ENST00000533931 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
CTTN-215ENST00000533931 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
CTTN-215ENST00000533931 SCN11AQ9UI33 1791 aa20.5■□□□□ 0.87
CTTN-215ENST00000533931 FAM182BQ5T319 152 aa20.5■□□□□ 0.87
CTTN-215ENST00000533931 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
CTTN-215ENST00000533931 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
CTTN-215ENST00000533931 SOCS7O14512 581 aa20.48■□□□□ 0.87
CTTN-215ENST00000533931 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
CTTN-215ENST00000533931 EP400Q96L91 3159 aa20.48■□□□□ 0.87
CTTN-215ENST00000533931 PRIM1P49642 420 aaKnown RBP20.47■□□□□ 0.87
CTTN-215ENST00000533931 CALD1Q05682 793 aaKnown RBP20.47■□□□□ 0.87
CTTN-215ENST00000533931 SLC52A2Q9HAB3 445 aa20.47■□□□□ 0.87
CTTN-215ENST00000533931 TMOD3Q9NYL9 352 aa20.47■□□□□ 0.87
CTTN-215ENST00000533931 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
CTTN-215ENST00000533931 CABP4P57796 275 aa20.46■□□□□ 0.87
CTTN-215ENST00000533931 TEFQ10587 303 aa20.46■□□□□ 0.87
CTTN-215ENST00000533931 LGR6Q9HBX8 967 aa20.46■□□□□ 0.87
CTTN-215ENST00000533931 DLG5Q8TDM6 1919 aa20.45■□□□□ 0.86
CTTN-215ENST00000533931 BABAM1Q9NWV8 329 aa20.45■□□□□ 0.86
CTTN-215ENST00000533931 RRP7AQ9Y3A4 280 aaKnown RBP20.45■□□□□ 0.86
CTTN-215ENST00000533931 TRIM37O94972 964 aa20.44■□□□□ 0.86
CTTN-215ENST00000533931 ACSBG1Q96GR2 724 aa20.44■□□□□ 0.86
CTTN-215ENST00000533931 KCNQ2O43526 872 aa20.43■□□□□ 0.86
CTTN-215ENST00000533931 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
CTTN-215ENST00000533931 MCM10Q7L590 875 aa20.43■□□□□ 0.86
CTTN-215ENST00000533931 TNS1Q9HBL0 1735 aaKnown RBP20.43■□□□□ 0.86
CTTN-215ENST00000533931 RGPD3A6NKT7 1758 aaPredicted RBP20.42■□□□□ 0.86
CTTN-215ENST00000533931 RGPD4Q7Z3J3 1758 aa20.42■□□□□ 0.86
CTTN-215ENST00000533931 NFATC2IPQ8NCF5 419 aa20.42■□□□□ 0.86
CTTN-215ENST00000533931 PIGBQ92521 554 aa20.42■□□□□ 0.86
CTTN-215ENST00000533931 SMARCC1Q92922 1105 aaPredicted RBP20.42■□□□□ 0.86
CTTN-215ENST00000533931 SYTL4Q96C24 671 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms