RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 PPP1R9BQ96SB3 815 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 PNNQ9H307 717 aaKnown RBP5.56□□□□□ -1.52
CTSC-208ENST00000533897 OSBPL3Q9H4L5 887 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 TRPM3Q9HCF6 1732 aaPredicted RBP5.56□□□□□ -1.52
CTSC-208ENST00000533897 MSH6P52701 1360 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 IPO8O15397 1037 aaKnown RBP5.55□□□□□ -1.52
CTSC-208ENST00000533897 MFAP1P55081 439 aaKnown RBP5.55□□□□□ -1.52
CTSC-208ENST00000533897 GAS2L2Q8NHY3 880 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 THUMPD2Q9BTF0 503 aaKnown RBP5.55□□□□□ -1.52
CTSC-208ENST00000533897 ZDHHC9Q9Y397 364 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 CHGAP10645 457 aaKnown RBP5.55□□□□□ -1.52
CTSC-208ENST00000533897 SRPK2P78362 688 aaKnown RBP5.55□□□□□ -1.52
CTSC-208ENST00000533897 NME9Q86XW9 330 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 USP26Q9BXU7 913 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 PLEKHG1Q9ULL1 1385 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 TCHHQ07283 1943 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 TTC22Q5TAA0 569 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 ANKRD44Q8N8A2 993 aa5.55□□□□□ -1.52
CTSC-208ENST00000533897 FER1L4A9Z1Z3 1794 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 TMEM2Q9UHN6 1383 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 GNAI1P63096 354 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 HDGFL2Q7Z4V5 671 aaPredicted RBP5.54□□□□□ -1.52
CTSC-208ENST00000533897 RBM42Q9BTD8 480 aaKnown RBP5.54□□□□□ -1.52
CTSC-208ENST00000533897 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 C5P01031 1676 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 PLEKHG3A1L390 1219 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 MRE11P49959 708 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 CEP85Q6P2H3 762 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.54□□□□□ -1.52
CTSC-208ENST00000533897 MRC1P22897 1456 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 NCKAP5LQ9HCH0 1330 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 DDX11L8A8MPP1 907 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 K7ELQ4 463 aaPredicted RBP5.54□□□□□ -1.52
CTSC-208ENST00000533897 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
CTSC-208ENST00000533897 GRPEL1Q9HAV7 217 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 STK26Q9P289 416 aa5.54□□□□□ -1.52
CTSC-208ENST00000533897 SAFB2Q14151 953 aaKnown RBP eCLIP5.53□□□□□ -1.52
CTSC-208ENST00000533897 UPF2Q9HAU5 1272 aaKnown RBP5.53□□□□□ -1.52
CTSC-208ENST00000533897 FAM83GA6ND36 823 aa5.53□□□□□ -1.52
CTSC-208ENST00000533897 ZNF445P59923 1031 aa5.53□□□□□ -1.52
CTSC-208ENST00000533897 EIF4A2Q14240 407 aaKnown RBP5.53□□□□□ -1.52
CTSC-208ENST00000533897 TWISTNBQ3B726 338 aaPredicted RBP5.53□□□□□ -1.52
CTSC-208ENST00000533897 PDLIM2Q96JY6 352 aa5.53□□□□□ -1.52
CTSC-208ENST00000533897 UBE2Q2Q8WVN8 375 aa5.53□□□□□ -1.52
CTSC-208ENST00000533897 C1orf115Q9H7X2 142 aa5.53□□□□□ -1.52
CTSC-208ENST00000533897 DAXXQ9UER7 740 aaPredicted RBP5.53□□□□□ -1.52
CTSC-208ENST00000533897 PTPRCP08575 1304 aa5.53□□□□□ -1.52
CTSC-208ENST00000533897 GOLGA6L3A6NEY3 463 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 OTUD7AQ8TE49 926 aaPredicted RBP5.52□□□□□ -1.53
CTSC-208ENST00000533897 NUDT16Q96DE0 195 aaKnown RBP5.52□□□□□ -1.53
CTSC-208ENST00000533897 LMBRD1Q9NUN5 540 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 SCN11AQ9UI33 1791 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 CALD1Q05682 793 aaKnown RBP5.52□□□□□ -1.53
CTSC-208ENST00000533897 KLHL40Q2TBA0 621 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 LAMA4Q16363 1823 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 IGSF1Q8N6C5 1336 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 CDC45O75419 566 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 HMOX1P09601 288 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 AEBP1Q8IUX7 1158 aa5.52□□□□□ -1.53
CTSC-208ENST00000533897 C16orf71Q8IYS4 520 aaPredicted RBP5.52□□□□□ -1.53
CTSC-208ENST00000533897 SLIT3O75094 1523 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 PKP1Q13835 747 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.51□□□□□ -1.53
CTSC-208ENST00000533897 RGPD5Q99666 1765 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 TTC21BQ7Z4L5 1316 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 ANKARQ7Z5J8 1434 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 PLEKHG5O94827 1062 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 BAG4O95429 457 aaKnown RBP5.51□□□□□ -1.53
CTSC-208ENST00000533897 SSFA2P28290 1259 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 KRT24Q2M2I5 525 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 HSCBQ8IWL3 235 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 API5Q9BZZ5 524 aaKnown RBP5.51□□□□□ -1.53
CTSC-208ENST00000533897 COL18A1P39060 1754 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 CUL4AQ13619 759 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 CCDC61Q9Y6R9 512 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 ALS2Q96Q42 1657 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 ABCC6O95255 1503 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 SBNO1A3KN83 1393 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 CEMIPQ8WUJ3 1361 aa5.51□□□□□ -1.53
CTSC-208ENST00000533897 MST1RQ04912 1400 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 SDSP20132 328 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 ANKRD45Q5TZF3 282 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 RPAP2Q8IXW5 612 aaPredicted RBP5.5□□□□□ -1.53
CTSC-208ENST00000533897 GPT2Q8TD30 523 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 MAP3K19Q56UN5 1328 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 ADAMTSL3P82987 1691 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 NUP188Q5SRE5 1749 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 PARP4Q9UKK3 1724 aaKnown RBP5.5□□□□□ -1.53
CTSC-208ENST00000533897 NPM1P06748 294 aaKnown RBP eCLIP5.5□□□□□ -1.53
CTSC-208ENST00000533897 RRS1Q15050 365 aaKnown RBP5.5□□□□□ -1.53
CTSC-208ENST00000533897 LMOD3Q0VAK6 560 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 DCTN1Q14203 1278 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.5□□□□□ -1.53
CTSC-208ENST00000533897 CHMP4BQ9H444 224 aaKnown RBP5.5□□□□□ -1.53
CTSC-208ENST00000533897 STAP2Q9UGK3 403 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 LAMB4A4D0S4 1761 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 PAPPAQ13219 1627 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 PKD1L3Q7Z443 1732 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 RABEP1Q15276 862 aa5.5□□□□□ -1.53
CTSC-208ENST00000533897 SKOR2Q2VWA4 1001 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms