RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TSHZ3Q63HK5 1081 aa23.85■■□□□ 1.41
CAPN1-226ENST00000533820 CLTCQ00610 1675 aaKnown RBP23.84■■□□□ 1.41
CAPN1-226ENST00000533820 SDSP20132 328 aa23.84■■□□□ 1.41
CAPN1-226ENST00000533820 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
CAPN1-226ENST00000533820 GOLGA6L22H0YM25 854 aa23.83■■□□□ 1.41
CAPN1-226ENST00000533820 EDC4Q6P2E9 1401 aaKnown RBP23.83■■□□□ 1.41
CAPN1-226ENST00000533820 BAG4O95429 457 aaKnown RBP23.83■■□□□ 1.41
CAPN1-226ENST00000533820 SLC4A2P04920 1241 aa23.83■■□□□ 1.41
CAPN1-226ENST00000533820 CPS1P31327 1500 aa23.83■■□□□ 1.4
CAPN1-226ENST00000533820 ESPNB1AK53 854 aa23.82■■□□□ 1.4
CAPN1-226ENST00000533820 FOXO3O43524 673 aa23.82■■□□□ 1.4
CAPN1-226ENST00000533820 CEP85Q6P2H3 762 aa23.82■■□□□ 1.4
CAPN1-226ENST00000533820 ATP7BP35670 1465 aa23.82■■□□□ 1.4
CAPN1-226ENST00000533820 MSH6P52701 1360 aa23.81■■□□□ 1.4
CAPN1-226ENST00000533820 RICTORQ6R327 1708 aa23.81■■□□□ 1.4
CAPN1-226ENST00000533820 ZGPATQ8N5A5 531 aaKnown RBP23.81■■□□□ 1.4
CAPN1-226ENST00000533820 ANKRD44Q8N8A2 993 aa23.81■■□□□ 1.4
CAPN1-226ENST00000533820 NECTIN2Q92692 538 aa23.81■■□□□ 1.4
CAPN1-226ENST00000533820 USP26Q9BXU7 913 aa23.81■■□□□ 1.4
CAPN1-226ENST00000533820 SKOR2Q2VWA4 1001 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-226ENST00000533820 CDC42BPGQ6DT37 1551 aa23.8■■□□□ 1.4
CAPN1-226ENST00000533820 INTS3Q68E01 1043 aaKnown RBP23.8■■□□□ 1.4
CAPN1-226ENST00000533820 RABEP1Q15276 862 aa23.79■■□□□ 1.4
CAPN1-226ENST00000533820 G2E3Q7L622 706 aa23.79■■□□□ 1.4
CAPN1-226ENST00000533820 PRR36Q9H6K5 1346 aa23.79■■□□□ 1.4
CAPN1-226ENST00000533820 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
CAPN1-226ENST00000533820 NOL8Q76FK4 1167 aaKnown RBP23.79■■□□□ 1.4
CAPN1-226ENST00000533820 CAVIN1Q6NZI2 390 aaKnown RBP23.78■■□□□ 1.4
CAPN1-226ENST00000533820 PDCL3Q9H2J4 239 aa23.78■■□□□ 1.4
CAPN1-226ENST00000533820 A2ML1A8K2U0 1454 aa23.78■■□□□ 1.4
CAPN1-226ENST00000533820 DLG5Q8TDM6 1919 aa23.78■■□□□ 1.4
CAPN1-226ENST00000533820 ARID3AQ99856 593 aa23.78■■□□□ 1.4
CAPN1-226ENST00000533820 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
CAPN1-226ENST00000533820 PLPPR3Q6T4P5 718 aa23.77■■□□□ 1.4
CAPN1-226ENST00000533820 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
CAPN1-226ENST00000533820 EXOC6BQ9Y2D4 811 aa23.76■■□□□ 1.39
CAPN1-226ENST00000533820 NASPP49321 788 aaPredicted RBP23.75■■□□□ 1.39
CAPN1-226ENST00000533820 ESF1Q9H501 851 aaKnown RBP23.75■■□□□ 1.39
CAPN1-226ENST00000533820 CHL1O00533 1208 aa23.75■■□□□ 1.39
CAPN1-226ENST00000533820 RPAP2Q8IXW5 612 aaPredicted RBP23.75■■□□□ 1.39
CAPN1-226ENST00000533820 CASC1Q6TDU7 716 aa23.74■■□□□ 1.39
CAPN1-226ENST00000533820 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.74■■□□□ 1.39
CAPN1-226ENST00000533820 BBXQ8WY36 941 aaPredicted RBP23.74■■□□□ 1.39
CAPN1-226ENST00000533820 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
CAPN1-226ENST00000533820 ATP10DQ9P241 1426 aa23.74■■□□□ 1.39
CAPN1-226ENST00000533820 PRPF40AO75400 957 aaKnown RBP23.73■■□□□ 1.39
CAPN1-226ENST00000533820 AATKQ6ZMQ8 1374 aa23.73■■□□□ 1.39
CAPN1-226ENST00000533820 RBM27Q9P2N5 1060 aaKnown RBP23.73■■□□□ 1.39
CAPN1-226ENST00000533820 TSPYL4Q9UJ04 414 aa23.72■■□□□ 1.39
CAPN1-226ENST00000533820 ACEP12821 1306 aa23.72■■□□□ 1.39
CAPN1-226ENST00000533820 FOXD4L6Q3SYB3 417 aaPredicted RBP23.72■■□□□ 1.39
CAPN1-226ENST00000533820 FOXD4L3Q6VB84 417 aaPredicted RBP23.72■■□□□ 1.39
CAPN1-226ENST00000533820 ZHX1Q9UKY1 873 aaPredicted RBP23.72■■□□□ 1.39
CAPN1-226ENST00000533820 KLHL40Q2TBA0 621 aa23.71■■□□□ 1.39
CAPN1-226ENST00000533820 ISY1Q9ULR0 285 aaKnown RBP23.7■■□□□ 1.39
CAPN1-226ENST00000533820 TTC21BQ7Z4L5 1316 aa23.7■■□□□ 1.39
CAPN1-226ENST00000533820 RGS12O14924 1447 aa23.7■■□□□ 1.38
CAPN1-226ENST00000533820 ST18O60284 1047 aa23.7■■□□□ 1.38
CAPN1-226ENST00000533820 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
CAPN1-226ENST00000533820 NEK4P51957 841 aa23.69■■□□□ 1.38
CAPN1-226ENST00000533820 TPRNQ4KMQ1 711 aa23.69■■□□□ 1.38
CAPN1-226ENST00000533820 ANP32BQ92688 251 aaKnown RBP23.68■■□□□ 1.38
CAPN1-226ENST00000533820 NUCB2P80303 420 aa23.68■■□□□ 1.38
CAPN1-226ENST00000533820 PTMSP20962 102 aa23.68■■□□□ 1.38
CAPN1-226ENST00000533820 MTHFSDQ2M296 383 aaKnown RBP23.68■■□□□ 1.38
CAPN1-226ENST00000533820 RILPL2Q969X0 211 aa23.67■■□□□ 1.38
CAPN1-226ENST00000533820 REC8O95072 547 aa23.67■■□□□ 1.38
CAPN1-226ENST00000533820 LMBRD1Q9NUN5 540 aa23.67■■□□□ 1.38
CAPN1-226ENST00000533820 TSPOAP1O95153 1857 aa23.67■■□□□ 1.38
CAPN1-226ENST00000533820 ERC2O15083 957 aa23.66■■□□□ 1.38
CAPN1-226ENST00000533820 PDE1AP54750 535 aa23.66■■□□□ 1.38
CAPN1-226ENST00000533820 TRIM6-TRIM34B2RNG4 842 aa23.66■■□□□ 1.38
CAPN1-226ENST00000533820 NUTM2GQ5VZR2 741 aa23.66■■□□□ 1.38
CAPN1-226ENST00000533820 SLC26A8Q96RN1 970 aa23.66■■□□□ 1.38
CAPN1-226ENST00000533820 ZSCAN23Q3MJ62 389 aa23.65■■□□□ 1.38
CAPN1-226ENST00000533820 MAP3K19Q56UN5 1328 aa23.65■■□□□ 1.38
CAPN1-226ENST00000533820 HMMRO75330 724 aa23.65■■□□□ 1.38
CAPN1-226ENST00000533820 HAP1P54257 671 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-226ENST00000533820 DLC1Q96QB1 1528 aa23.65■■□□□ 1.38
CAPN1-226ENST00000533820 FKBP5Q13451 457 aaPredicted RBP23.64■■□□□ 1.38
CAPN1-226ENST00000533820 ZDHHC9Q9Y397 364 aa23.64■■□□□ 1.38
CAPN1-226ENST00000533820 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.38
CAPN1-226ENST00000533820 PTPRCP08575 1304 aa23.64■■□□□ 1.37
CAPN1-226ENST00000533820 RIMBP3CA6NJZ7 1639 aa23.63■■□□□ 1.37
CAPN1-226ENST00000533820 RIMBP3BA6NNM3 1639 aa23.63■■□□□ 1.37
CAPN1-226ENST00000533820 RIMBP3Q9UFD9 1639 aa23.63■■□□□ 1.37
CAPN1-226ENST00000533820 ANO2Q9NQ90 1003 aa23.63■■□□□ 1.37
CAPN1-226ENST00000533820 PRIM1P49642 420 aaKnown RBP23.62■■□□□ 1.37
CAPN1-226ENST00000533820 LTV1Q96GA3 475 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-226ENST00000533820 RBSNQ9H1K0 784 aa23.62■■□□□ 1.37
CAPN1-226ENST00000533820 PRDM10Q9NQV6 1147 aa23.62■■□□□ 1.37
CAPN1-226ENST00000533820 NSFL1CQ9UNZ2 370 aaKnown RBP23.62■■□□□ 1.37
CAPN1-226ENST00000533820 KIF24Q5T7B8 1368 aa23.62■■□□□ 1.37
CAPN1-226ENST00000533820 PNMA6EA0A0J9YXQ4 647 aa23.61■■□□□ 1.37
CAPN1-226ENST00000533820 CCDC173Q0VFZ6 552 aa23.61■■□□□ 1.37
CAPN1-226ENST00000533820 GPT2Q8TD30 523 aa23.61■■□□□ 1.37
CAPN1-226ENST00000533820 PALD1Q9ULE6 856 aa23.61■■□□□ 1.37
CAPN1-226ENST00000533820 UPF3BQ9BZI7 483 aaKnown RBP23.61■■□□□ 1.37
CAPN1-226ENST00000533820 CYP2E1P05181 493 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-226ENST00000533820 AMPHP49418 695 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms