RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ANKRD24Q8TF21 1146 aa17.79■□□□□ 0.44
SVIP-205ENST00000533774 HSPA6P17066 643 aa17.78■□□□□ 0.44
SVIP-205ENST00000533774 NME9Q86XW9 330 aa17.78■□□□□ 0.44
SVIP-205ENST00000533774 ADCY9O60503 1353 aa17.78■□□□□ 0.44
SVIP-205ENST00000533774 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
SVIP-205ENST00000533774 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
SVIP-205ENST00000533774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
SVIP-205ENST00000533774 DDX54Q8TDD1 881 aaKnown RBP17.77■□□□□ 0.44
SVIP-205ENST00000533774 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.43
SVIP-205ENST00000533774 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
SVIP-205ENST00000533774 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
SVIP-205ENST00000533774 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
SVIP-205ENST00000533774 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
SVIP-205ENST00000533774 C5P01031 1676 aa17.74■□□□□ 0.43
SVIP-205ENST00000533774 ZNF526Q8TF50 670 aaPredicted RBP17.74■□□□□ 0.43
SVIP-205ENST00000533774 SBNO2Q9Y2G9 1366 aa17.74■□□□□ 0.43
SVIP-205ENST00000533774 SYTL4Q96C24 671 aaPredicted RBP17.73■□□□□ 0.43
SVIP-205ENST00000533774 ANKRD36BQ8N2N9 1353 aa17.73■□□□□ 0.43
SVIP-205ENST00000533774 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
SVIP-205ENST00000533774 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
SVIP-205ENST00000533774 L3MBTL2Q969R5 705 aa17.69■□□□□ 0.42
SVIP-205ENST00000533774 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
SVIP-205ENST00000533774 MEGF6O75095 1541 aa17.68■□□□□ 0.42
SVIP-205ENST00000533774 KIF3CO14782 793 aa17.68■□□□□ 0.42
SVIP-205ENST00000533774 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
SVIP-205ENST00000533774 IP6K1Q92551 441 aa17.68■□□□□ 0.42
SVIP-205ENST00000533774 CD2APQ9Y5K6 639 aa17.68■□□□□ 0.42
SVIP-205ENST00000533774 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
SVIP-205ENST00000533774 ITGB4P16144 1822 aa17.66■□□□□ 0.42
SVIP-205ENST00000533774 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
SVIP-205ENST00000533774 FBLN1P23142 703 aa17.64■□□□□ 0.41
SVIP-205ENST00000533774 ZCRB1Q8TBF4 217 aaKnown RBP17.64■□□□□ 0.41
SVIP-205ENST00000533774 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
SVIP-205ENST00000533774 C4BP0C0L5 1744 aa17.64■□□□□ 0.41
SVIP-205ENST00000533774 SMIM5Q71RC9 77 aa17.63■□□□□ 0.41
SVIP-205ENST00000533774 DNAJC5GQ8N7S2 189 aa17.63■□□□□ 0.41
SVIP-205ENST00000533774 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
SVIP-205ENST00000533774 USP47Q96K76 1375 aa17.63■□□□□ 0.41
SVIP-205ENST00000533774 EDC4Q6P2E9 1401 aaKnown RBP17.63■□□□□ 0.41
SVIP-205ENST00000533774 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
SVIP-205ENST00000533774 IGSF1Q8N6C5 1336 aa17.62■□□□□ 0.41
SVIP-205ENST00000533774 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
SVIP-205ENST00000533774 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
SVIP-205ENST00000533774 N4BP2Q86UW6 1770 aaPredicted RBP17.61■□□□□ 0.41
SVIP-205ENST00000533774 TMC1Q8TDI8 760 aa17.6■□□□□ 0.41
SVIP-205ENST00000533774 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
SVIP-205ENST00000533774 WDR90Q96KV7 1748 aa17.6■□□□□ 0.41
SVIP-205ENST00000533774 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
SVIP-205ENST00000533774 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
SVIP-205ENST00000533774 HOXC9P31274 260 aa17.59■□□□□ 0.41
SVIP-205ENST00000533774 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
SVIP-205ENST00000533774 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
SVIP-205ENST00000533774 APLP1P51693 650 aa17.57■□□□□ 0.4
SVIP-205ENST00000533774 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
SVIP-205ENST00000533774 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
SVIP-205ENST00000533774 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
SVIP-205ENST00000533774 PALLDQ8WX93 1383 aa17.56■□□□□ 0.4
SVIP-205ENST00000533774 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
SVIP-205ENST00000533774 ZBTB22O15209 634 aa17.55■□□□□ 0.4
SVIP-205ENST00000533774 FLAD1Q8NFF5 587 aa17.55■□□□□ 0.4
SVIP-205ENST00000533774 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
SVIP-205ENST00000533774 PHF14O94880 888 aa17.53■□□□□ 0.4
SVIP-205ENST00000533774 AMPHP49418 695 aa17.53■□□□□ 0.4
SVIP-205ENST00000533774 COL13A1Q5TAT6 717 aaPredicted RBP17.53■□□□□ 0.4
SVIP-205ENST00000533774 HTRA3P83110 453 aa17.52■□□□□ 0.4
SVIP-205ENST00000533774 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.4
SVIP-205ENST00000533774 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.4
SVIP-205ENST00000533774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
SVIP-205ENST00000533774 TOMM70O94826 608 aa17.51■□□□□ 0.39
SVIP-205ENST00000533774 NMRK2Q9NPI5 230 aa17.51■□□□□ 0.39
SVIP-205ENST00000533774 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
SVIP-205ENST00000533774 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
SVIP-205ENST00000533774 CYP27B1O15528 508 aa17.5■□□□□ 0.39
SVIP-205ENST00000533774 RRS1Q15050 365 aaKnown RBP17.5■□□□□ 0.39
SVIP-205ENST00000533774 AK7Q96M32 723 aa17.5■□□□□ 0.39
SVIP-205ENST00000533774 LINC00116Q8NCU8 138 aa17.49■□□□□ 0.39
SVIP-205ENST00000533774 COG3Q96JB2 828 aa17.49■□□□□ 0.39
SVIP-205ENST00000533774 PCNTO95613 3336 aa17.49■□□□□ 0.39
SVIP-205ENST00000533774 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
SVIP-205ENST00000533774 ARFGEF1Q9Y6D6 1849 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 RAPGEF4Q8WZA2 1011 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 PIGBQ92521 554 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
SVIP-205ENST00000533774 SBF1O95248 1867 aa17.46■□□□□ 0.39
SVIP-205ENST00000533774 CAPN15O75808 1086 aa17.46■□□□□ 0.39
SVIP-205ENST00000533774 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
SVIP-205ENST00000533774 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
SVIP-205ENST00000533774 SSFA2P28290 1259 aa17.45■□□□□ 0.38
SVIP-205ENST00000533774 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
SVIP-205ENST00000533774 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
SVIP-205ENST00000533774 A0A0G2JLW4 131 aa17.44■□□□□ 0.38
SVIP-205ENST00000533774 ITPK1Q13572 414 aa17.44■□□□□ 0.38
SVIP-205ENST00000533774 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
SVIP-205ENST00000533774 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
SVIP-205ENST00000533774 MMP10P09238 476 aa17.43■□□□□ 0.38
SVIP-205ENST00000533774 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
SVIP-205ENST00000533774 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms