RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 SOS1Q07889 1333 aaPredicted RBP5.07□□□□□ -1.6
ATM-221ENST00000533690 USP42Q9H9J4 1324 aaKnown RBP5.07□□□□□ -1.6
ATM-221ENST00000533690 TIAM2Q8IVF5 1701 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 PLEKHG5O94827 1062 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 IDI1Q13907 227 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 PRR36Q9H6K5 1346 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 KIF3BO15066 747 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 EPB41L2O43491 1005 aaKnown RBP5.07□□□□□ -1.6
ATM-221ENST00000533690 BMP2KLQ5H9B9 411 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.07□□□□□ -1.6
ATM-221ENST00000533690 UBE2Q2Q8WVN8 375 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 SNRKQ9NRH2 765 aa5.07□□□□□ -1.6
ATM-221ENST00000533690 PLEKHG3A1L390 1219 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 FCHSD2O94868 740 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 RAB3GAP1Q15042 981 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 INTS3Q68E01 1043 aaKnown RBP5.06□□□□□ -1.6
ATM-221ENST00000533690 SLC12A5Q9H2X9 1139 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 IFT57Q9NWB7 429 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 POLKQ9UBT6 870 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 AFDNP55196 1824 aaKnown RBP5.06□□□□□ -1.6
ATM-221ENST00000533690 BCORQ6W2J9 1755 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 VGFO15240 615 aaPredicted RBP5.06□□□□□ -1.6
ATM-221ENST00000533690 VAMP4O75379 141 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 FRAT1Q92837 279 aaPredicted RBP5.06□□□□□ -1.6
ATM-221ENST00000533690 CIZ1Q9ULV3 898 aaPredicted RBP5.06□□□□□ -1.6
ATM-221ENST00000533690 PDZRN3Q9UPQ7 1066 aa5.06□□□□□ -1.6
ATM-221ENST00000533690 SPDYE4A6NLX3 237 aa5.05□□□□□ -1.6
ATM-221ENST00000533690 PPP1R9BQ96SB3 815 aa5.05□□□□□ -1.6
ATM-221ENST00000533690 FBLN2P98095 1184 aa5.05□□□□□ -1.6
ATM-221ENST00000533690 KCNB2Q92953 911 aa5.05□□□□□ -1.6
ATM-221ENST00000533690 MTHFSP49914 203 aa5.05□□□□□ -1.6
ATM-221ENST00000533690 ATF7IPQ6VMQ6 1270 aa5.05□□□□□ -1.6
ATM-221ENST00000533690 RGL3Q3MIN7 710 aa5.04□□□□□ -1.6
ATM-221ENST00000533690 PDLIM2Q96JY6 352 aa5.04□□□□□ -1.6
ATM-221ENST00000533690 SSH1Q8WYL5 1049 aa5.04□□□□□ -1.6
ATM-221ENST00000533690 MYH16Q9H6N6 1097 aa5.04□□□□□ -1.6
ATM-221ENST00000533690 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.04□□□□□ -1.6
ATM-221ENST00000533690 RPAP1Q9BWH6 1393 aaPredicted RBP5.04□□□□□ -1.6
ATM-221ENST00000533690 WDR43Q15061 677 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATM-221ENST00000533690 PANK1Q8TE04 598 aa5.04□□□□□ -1.6
ATM-221ENST00000533690 IGSF1Q8N6C5 1336 aa5.03□□□□□ -1.6
ATM-221ENST00000533690 GSPT1P15170 499 aaKnown RBP5.03□□□□□ -1.6
ATM-221ENST00000533690 BABAM1Q9NWV8 329 aa5.03□□□□□ -1.6
ATM-221ENST00000533690 AOX1Q06278 1338 aa5.03□□□□□ -1.6
ATM-221ENST00000533690 NFE2L2Q16236 605 aa5.03□□□□□ -1.6
ATM-221ENST00000533690 CCDC146Q8IYE0 955 aa5.03□□□□□ -1.6
ATM-221ENST00000533690 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.03□□□□□ -1.6
ATM-221ENST00000533690 MYH7P12883 1935 aa5.03□□□□□ -1.6
ATM-221ENST00000533690 CHL1O00533 1208 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 FRAT2O75474 233 aaPredicted RBP5.02□□□□□ -1.61
ATM-221ENST00000533690 KCPQ6ZWJ8 1503 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 NPM1P06748 294 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATM-221ENST00000533690 TERF1P54274 439 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 ZKSCAN2Q63HK3 967 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 C14orf37Q86TY3 774 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 DCTPP1Q9H773 170 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 RRAGDQ9NQL2 400 aaPredicted RBP5.02□□□□□ -1.61
ATM-221ENST00000533690 COL5A3P25940 1745 aaPredicted RBP5.02□□□□□ -1.61
ATM-221ENST00000533690 NRAPQ86VF7 1730 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 HSP90AB1P08238 724 aaKnown RBP5.02□□□□□ -1.61
ATM-221ENST00000533690 CLCN1P35523 988 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 ZNF445P59923 1031 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 GCC1Q96CN9 775 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 DDX19BQ9UMR2 479 aa5.02□□□□□ -1.61
ATM-221ENST00000533690 ZNF646O15015 1829 aaPredicted RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 ZNF326Q5BKZ1 582 aaKnown RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 DZIP1LQ8IYY4 767 aaKnown RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 TMEM87AQ8NBN3 555 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 CD2BP2O95400 341 aaKnown RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 CUL4AQ13619 759 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 NPM2Q86SE8 214 aaKnown RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 CFAP44Q96MT7 982 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 STAP2Q9UGK3 403 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 UTYO14607 1347 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 ERBB4Q15303 1308 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 MCM4P33991 863 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 TMEM57Q8N5G2 664 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 ANO8Q9HCE9 1232 aaPredicted RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 ZDHHC9Q9Y397 364 aa5.01□□□□□ -1.61
ATM-221ENST00000533690 SALL2Q9Y467 1007 aaPredicted RBP5.01□□□□□ -1.61
ATM-221ENST00000533690 TNRQ92752 1358 aa5□□□□□ -1.61
ATM-221ENST00000533690 PTPRCP08575 1304 aa5□□□□□ -1.61
ATM-221ENST00000533690 NEFMP07197 916 aa5□□□□□ -1.61
ATM-221ENST00000533690 XRCC6P12956 609 aaKnown RBP eCLIP5□□□□□ -1.61
ATM-221ENST00000533690 DDX60LQ5H9U9 1706 aaKnown RBP5□□□□□ -1.61
ATM-221ENST00000533690 TTC21BQ7Z4L5 1316 aa5□□□□□ -1.61
ATM-221ENST00000533690 TTC21AQ8NDW8 1320 aa5□□□□□ -1.61
ATM-221ENST00000533690 WASLO00401 505 aaPredicted RBP5□□□□□ -1.61
ATM-221ENST00000533690 HTATSF1O43719 755 aaKnown RBP5□□□□□ -1.61
ATM-221ENST00000533690 HS1BP3Q53T59 392 aa5□□□□□ -1.61
ATM-221ENST00000533690 PLEKHM2Q8IWE5 1019 aa5□□□□□ -1.61
ATM-221ENST00000533690 PHACTR3Q96KR7 559 aa5□□□□□ -1.61
ATM-221ENST00000533690 RWDD1Q9H446 243 aaPredicted RBP5□□□□□ -1.61
ATM-221ENST00000533690 PXDNQ92626 1479 aa5□□□□□ -1.61
ATM-221ENST00000533690 NPHP4O75161 1426 aaPredicted RBP5□□□□□ -1.61
ATM-221ENST00000533690 EXOSC9Q06265 439 aaKnown RBP4.99□□□□□ -1.61
ATM-221ENST00000533690 MORC1Q86VD1 984 aa4.99□□□□□ -1.61
ATM-221ENST00000533690 ANKRD44Q8N8A2 993 aa4.99□□□□□ -1.61
ATM-221ENST00000533690 PODXL2Q9NZ53 605 aa4.99□□□□□ -1.61
ATM-221ENST00000533690 POGKQ9P215 609 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms