RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
VPS51-211ENST00000533487 SBF2Q86WG5 1849 aa28.22■■■□□ 2.11
VPS51-211ENST00000533487 MARCH10Q8NA82 808 aaPredicted RBP28.21■■■□□ 2.11
VPS51-211ENST00000533487 KDRP35968 1356 aa28.21■■■□□ 2.11
VPS51-211ENST00000533487 EP400Q96L91 3159 aa28.21■■■□□ 2.11
VPS51-211ENST00000533487 SHANK3Q9BYB0 1731 aa28.21■■■□□ 2.11
VPS51-211ENST00000533487 SF3B2Q13435 895 aaKnown RBP28.2■■■□□ 2.1
VPS51-211ENST00000533487 PCDH11XQ9BZA7 1347 aa28.18■■■□□ 2.1
VPS51-211ENST00000533487 PCDH11YQ9BZA8 1340 aa28.18■■■□□ 2.1
VPS51-211ENST00000533487 SPG7Q9UQ90 795 aa28.17■■■□□ 2.1
VPS51-211ENST00000533487 NUDCQ9Y266 331 aa28.17■■■□□ 2.1
VPS51-211ENST00000533487 TNS1Q9HBL0 1735 aaKnown RBP28.15■■■□□ 2.1
VPS51-211ENST00000533487 FAM182BQ5T319 152 aa28.15■■■□□ 2.1
VPS51-211ENST00000533487 MYBBP1AQ9BQG0 1328 aaKnown RBP28.14■■■□□ 2.09
VPS51-211ENST00000533487 AMOTQ4VCS5 1084 aa28.13■■■□□ 2.09
VPS51-211ENST00000533487 SULT6B1Q6IMI4 303 aa28.12■■■□□ 2.09
VPS51-211ENST00000533487 NHSQ6T4R5 1651 aa28.12■■■□□ 2.09
VPS51-211ENST00000533487 BAG6P46379 1132 aa28.11■■■□□ 2.09
VPS51-211ENST00000533487 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
VPS51-211ENST00000533487 PRKRIP1Q9H875 184 aaPredicted RBP28.11■■■□□ 2.09
VPS51-211ENST00000533487 PLEKHO1Q53GL0 409 aaPredicted RBP28.1■■■□□ 2.09
VPS51-211ENST00000533487 BCL11BQ9C0K0 894 aaPredicted RBP28.1■■■□□ 2.09
VPS51-211ENST00000533487 RGPD3A6NKT7 1758 aaPredicted RBP28.09■■■□□ 2.09
VPS51-211ENST00000533487 RGPD4Q7Z3J3 1758 aa28.09■■■□□ 2.09
VPS51-211ENST00000533487 TRIM37O94972 964 aa28.09■■■□□ 2.09
VPS51-211ENST00000533487 NKX1-1Q15270 411 aaPredicted RBP28.06■■■□□ 2.08
VPS51-211ENST00000533487 IFNL2Q8IZJ0 200 aa28.06■■■□□ 2.08
VPS51-211ENST00000533487 KAT6BQ8WYB5 2073 aa28.06■■■□□ 2.08
VPS51-211ENST00000533487 U2SURPO15042 1029 aaKnown RBP28.05■■■□□ 2.08
VPS51-211ENST00000533487 AEBP1Q8IUX7 1158 aa28.05■■■□□ 2.08
VPS51-211ENST00000533487 CYP27B1O15528 508 aa28.04■■■□□ 2.08
VPS51-211ENST00000533487 HSP90AB1P08238 724 aaKnown RBP28.04■■■□□ 2.08
VPS51-211ENST00000533487 DOT1LQ8TEK3 1739 aa28.04■■■□□ 2.08
VPS51-211ENST00000533487 PLSCR1O15162 318 aa28.01■■■□□ 2.07
VPS51-211ENST00000533487 FCHSD2O94868 740 aa28.01■■■□□ 2.07
VPS51-211ENST00000533487 APBA3O96018 575 aa28.01■■■□□ 2.07
VPS51-211ENST00000533487 HMOX1P09601 288 aa28■■■□□ 2.07
VPS51-211ENST00000533487 PHKG2P15735 406 aa28■■■□□ 2.07
VPS51-211ENST00000533487 PNNQ9H307 717 aaKnown RBP27.99■■■□□ 2.07
VPS51-211ENST00000533487 BTAF1O14981 1849 aa27.98■■■□□ 2.07
VPS51-211ENST00000533487 U2AF1L5P0DN76 240 aaPredicted RBP27.98■■■□□ 2.07
VPS51-211ENST00000533487 U2AF1Q01081 240 aaKnown RBP eCLIP27.98■■■□□ 2.07
VPS51-211ENST00000533487 ANP32CO43423 234 aa27.97■■■□□ 2.07
VPS51-211ENST00000533487 C1orf141Q5JVX7 400 aa27.97■■■□□ 2.07
VPS51-211ENST00000533487 ZNF530Q6P9A1 599 aaPredicted RBP27.97■■■□□ 2.07
VPS51-211ENST00000533487 DCAF5Q96JK2 942 aa27.96■■■□□ 2.07
VPS51-211ENST00000533487 ITGB4P16144 1822 aa27.95■■■□□ 2.07
VPS51-211ENST00000533487 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
VPS51-211ENST00000533487 RSPH6AQ9H0K4 717 aa27.95■■■□□ 2.06
VPS51-211ENST00000533487 AKAP4Q5JQC9 854 aa27.94■■■□□ 2.06
VPS51-211ENST00000533487 DEFB132Q7Z7B7 95 aa27.94■■■□□ 2.06
VPS51-211ENST00000533487 GAS2L2Q8NHY3 880 aa27.94■■■□□ 2.06
VPS51-211ENST00000533487 CAMKK2Q96RR4 588 aa27.94■■■□□ 2.06
VPS51-211ENST00000533487 TOGARAM1Q9Y4F4 1720 aa27.94■■■□□ 2.06
VPS51-211ENST00000533487 RREB1Q92766 1687 aa27.94■■■□□ 2.06
VPS51-211ENST00000533487 KCNQ2O43526 872 aa27.93■■■□□ 2.06
VPS51-211ENST00000533487 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
VPS51-211ENST00000533487 PRIM1P49642 420 aaKnown RBP27.93■■■□□ 2.06
VPS51-211ENST00000533487 ERVV-2B6SEH9 535 aa27.92■■■□□ 2.06
VPS51-211ENST00000533487 NEFMP07197 916 aa27.92■■■□□ 2.06
VPS51-211ENST00000533487 EN1Q05925 392 aaPredicted RBP27.92■■■□□ 2.06
VPS51-211ENST00000533487 SCN11AQ9UI33 1791 aa27.91■■■□□ 2.06
VPS51-211ENST00000533487 PRKAR2BP31323 418 aa27.9■■■□□ 2.06
VPS51-211ENST00000533487 SYTL4Q96C24 671 aaPredicted RBP27.9■■■□□ 2.06
VPS51-211ENST00000533487 ADAMTS7Q9UKP4 1686 aa27.88■■■□□ 2.05
VPS51-211ENST00000533487 VIRMAQ69YN4 1812 aaKnown RBP27.88■■■□□ 2.05
VPS51-211ENST00000533487 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
VPS51-211ENST00000533487 PTF1AQ7RTS3 328 aa27.87■■■□□ 2.05
VPS51-211ENST00000533487 LY75O60449 1722 aa27.87■■■□□ 2.05
VPS51-211ENST00000533487 EZH2Q15910 746 aaKnown RBP27.86■■■□□ 2.05
VPS51-211ENST00000533487 SMARCC1Q92922 1105 aaPredicted RBP27.85■■■□□ 2.05
VPS51-211ENST00000533487 TMOD3Q9NYL9 352 aa27.85■■■□□ 2.05
VPS51-211ENST00000533487 KDM6AO15550 1401 aaPredicted RBP27.84■■■□□ 2.05
VPS51-211ENST00000533487 NUP188Q5SRE5 1749 aa27.84■■■□□ 2.05
VPS51-211ENST00000533487 WDR43Q15061 677 aaKnown RBP eCLIP27.84■■■□□ 2.05
VPS51-211ENST00000533487 SLC27A3Q5K4L6 730 aa27.83■■■□□ 2.05
VPS51-211ENST00000533487 MAP3K5Q99683 1374 aa27.83■■■□□ 2.05
VPS51-211ENST00000533487 GNAT3A8MTJ3 354 aa27.82■■■□□ 2.04
VPS51-211ENST00000533487 MPRIPQ6WCQ1 1025 aa27.82■■■□□ 2.04
VPS51-211ENST00000533487 HTATSF1O43719 755 aaKnown RBP27.81■■■□□ 2.04
VPS51-211ENST00000533487 TXNRD1Q16881 649 aa27.81■■■□□ 2.04
VPS51-211ENST00000533487 PHACTR3Q96KR7 559 aa27.81■■■□□ 2.04
VPS51-211ENST00000533487 MRC1P22897 1456 aa27.81■■■□□ 2.04
VPS51-211ENST00000533487 CABP4P57796 275 aa27.8■■■□□ 2.04
VPS51-211ENST00000533487 PLEKHF1Q96S99 279 aa27.8■■■□□ 2.04
VPS51-211ENST00000533487 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
VPS51-211ENST00000533487 NBPF14Q5TI25 921 aa27.79■■■□□ 2.04
VPS51-211ENST00000533487 PIGBQ92521 554 aa27.79■■■□□ 2.04
VPS51-211ENST00000533487 RNMTO43148 476 aaKnown RBP27.78■■■□□ 2.04
VPS51-211ENST00000533487 ZNF831Q5JPB2 1677 aa27.76■■■□□ 2.03
VPS51-211ENST00000533487 PROM2Q8N271 834 aa27.76■■■□□ 2.03
VPS51-211ENST00000533487 PALLDQ8WX93 1383 aa27.75■■■□□ 2.03
VPS51-211ENST00000533487 SLC52A2Q9HAB3 445 aa27.75■■■□□ 2.03
VPS51-211ENST00000533487 DLG5Q8TDM6 1919 aa27.75■■■□□ 2.03
VPS51-211ENST00000533487 RTF1Q92541 710 aaKnown RBP27.74■■■□□ 2.03
VPS51-211ENST00000533487 CEMIPQ8WUJ3 1361 aa27.73■■■□□ 2.03
VPS51-211ENST00000533487 NFE2L2Q16236 605 aa27.72■■■□□ 2.03
VPS51-211ENST00000533487 NFATC2IPQ8NCF5 419 aa27.72■■■□□ 2.03
VPS51-211ENST00000533487 RUNDC1Q96C34 613 aa27.72■■■□□ 2.03
VPS51-211ENST00000533487 ADAMTS8Q9UP79 889 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms