RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
PICALM-221ENST00000533350 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
PICALM-221ENST00000533350 RASA1P20936 1047 aa8.21□□□□□ -1.1
PICALM-221ENST00000533350 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
PICALM-221ENST00000533350 USP4Q13107 963 aa8.21□□□□□ -1.1
PICALM-221ENST00000533350 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.1
PICALM-221ENST00000533350 MRGPRX2Q96LB1 330 aa8.21□□□□□ -1.1
PICALM-221ENST00000533350 CCDC85AQ96PX6 553 aaPredicted RBP8.21□□□□□ -1.1
PICALM-221ENST00000533350 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
PICALM-221ENST00000533350 SNRPBP14678 240 aaKnown RBP8.2□□□□□ -1.1
PICALM-221ENST00000533350 INTS6LQ5JSJ4 861 aaKnown RBP8.2□□□□□ -1.1
PICALM-221ENST00000533350 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
PICALM-221ENST00000533350 ESPNB1AK53 854 aa8.18□□□□□ -1.1
PICALM-221ENST00000533350 ADH1CP00326 375 aa8.18□□□□□ -1.1
PICALM-221ENST00000533350 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
PICALM-221ENST00000533350 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
PICALM-221ENST00000533350 USP17L15C9J2P7 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L10C9JJH3 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L13C9JLJ4 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L11C9JVI0 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L21D6R901 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L18D6R9N7 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L22D6RA61 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L17D6RBQ6 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L19D6RCP7 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L20D6RJB6 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 ATG7O95352 703 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 USP17L24Q0WX57 530 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 NR5A1Q13285 461 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
PICALM-221ENST00000533350 CCDC116Q8IYX3 515 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
PICALM-221ENST00000533350 ATP13A2Q9NQ11 1180 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 DNAAF2Q9NVR5 837 aaKnown RBP8.17□□□□□ -1.1
PICALM-221ENST00000533350 PGPEP1Q9NXJ5 209 aa8.17□□□□□ -1.1
PICALM-221ENST00000533350 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
PICALM-221ENST00000533350 GTF2IP78347 998 aa8.16□□□□□ -1.1
PICALM-221ENST00000533350 SUZ12Q15022 739 aaKnown RBP8.16□□□□□ -1.1
PICALM-221ENST00000533350 SENP2Q9HC62 589 aa8.16□□□□□ -1.1
PICALM-221ENST00000533350 CYLDQ9NQC7 956 aa8.16□□□□□ -1.1
PICALM-221ENST00000533350 FAM196BA6NMK8 535 aa8.15□□□□□ -1.1
PICALM-221ENST00000533350 MPNDQ8N594 471 aa8.15□□□□□ -1.1
PICALM-221ENST00000533350 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
PICALM-221ENST00000533350 FAM200AQ8TCP9 573 aa8.15□□□□□ -1.1
PICALM-221ENST00000533350 TRIM47Q96LD4 638 aa8.15□□□□□ -1.1
PICALM-221ENST00000533350 TMPRSS4Q9NRS4 437 aa8.15□□□□□ -1.1
PICALM-221ENST00000533350 USTQ9Y2C2 406 aa8.15□□□□□ -1.1
PICALM-221ENST00000533350 SIAH2O43255 324 aa8.14□□□□□ -1.11
PICALM-221ENST00000533350 SRPK2P78362 688 aaKnown RBP8.14□□□□□ -1.11
PICALM-221ENST00000533350 NNTQ13423 1086 aa8.14□□□□□ -1.11
PICALM-221ENST00000533350 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
PICALM-221ENST00000533350 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
PICALM-221ENST00000533350 CHIC2Q9UKJ5 165 aa8.14□□□□□ -1.11
PICALM-221ENST00000533350 EMILIN1Q9Y6C2 1016 aa8.14□□□□□ -1.11
PICALM-221ENST00000533350 GRM5P41594 1212 aa8.13□□□□□ -1.11
PICALM-221ENST00000533350 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
PICALM-221ENST00000533350 AEBP1Q8IUX7 1158 aa8.13□□□□□ -1.11
PICALM-221ENST00000533350 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
PICALM-221ENST00000533350 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
PICALM-221ENST00000533350 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
PICALM-221ENST00000533350 DPYDQ12882 1025 aa8.12□□□□□ -1.11
PICALM-221ENST00000533350 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
PICALM-221ENST00000533350 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
PICALM-221ENST00000533350 ZSCAN1Q8NBB4 408 aa8.12□□□□□ -1.11
PICALM-221ENST00000533350 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
PICALM-221ENST00000533350 SLC16A10Q8TF71 515 aa8.12□□□□□ -1.11
PICALM-221ENST00000533350 TRAIPQ9BWF2 469 aa8.12□□□□□ -1.11
PICALM-221ENST00000533350 ZBTB7CA1YPR0 619 aa8.11□□□□□ -1.11
PICALM-221ENST00000533350 SMPD1P17405 629 aa8.11□□□□□ -1.11
PICALM-221ENST00000533350 PTK7Q13308 1070 aa8.11□□□□□ -1.11
PICALM-221ENST00000533350 CCDC102BQ68D86 513 aa8.11□□□□□ -1.11
PICALM-221ENST00000533350 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
PICALM-221ENST00000533350 SCTRP47872 440 aa8.1□□□□□ -1.11
PICALM-221ENST00000533350 SEC13P55735 322 aa8.1□□□□□ -1.11
PICALM-221ENST00000533350 CLDN10P78369 228 aa8.1□□□□□ -1.11
PICALM-221ENST00000533350 B4GALNT3Q6L9W6 998 aa8.1□□□□□ -1.11
PICALM-221ENST00000533350 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
PICALM-221ENST00000533350 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
PICALM-221ENST00000533350 J3QL48 77 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 NR3C2P08235 984 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
PICALM-221ENST00000533350 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 HINFPQ9BQA5 517 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
PICALM-221ENST00000533350 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
PICALM-221ENST00000533350 GMPRP36959 345 aa8.08□□□□□ -1.12
PICALM-221ENST00000533350 KIAA1024Q9UPX6 916 aa8.08□□□□□ -1.12
PICALM-221ENST00000533350 SFI1A8K8P3 1242 aa8.07□□□□□ -1.12
PICALM-221ENST00000533350 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
PICALM-221ENST00000533350 ESCO1Q5FWF5 840 aa8.07□□□□□ -1.12
PICALM-221ENST00000533350 SIX5Q8N196 739 aa8.07□□□□□ -1.12
PICALM-221ENST00000533350 PCDHGA11Q9Y5H2 935 aa8.07□□□□□ -1.12
PICALM-221ENST00000533350 BACH1O14867 736 aa8.06□□□□□ -1.12
PICALM-221ENST00000533350 OSBPL3Q9H4L5 887 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms