RNA–Protein interactions for RNA: ENST00000532886.2

AP004608.1-204, humanhuman

TSL 2

Gene AP004608.1, Length 4,435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-204ENST00000532886 CPLX1O14810 134 aa15.25■□□□□ 0.03
AP004608.1-204ENST00000532886 MAP4K4O95819 1239 aaPredicted RBP15.25■□□□□ 0.03
AP004608.1-204ENST00000532886 HSPA2P54652 639 aa15.25■□□□□ 0.03
AP004608.1-204ENST00000532886 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
AP004608.1-204ENST00000532886 SMARCA5O60264 1052 aaPredicted RBP15.25■□□□□ 0.03
AP004608.1-204ENST00000532886 KIF6Q6ZMV9 814 aa15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 TTC21AQ8NDW8 1320 aa15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 MSH5O43196 834 aa15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
AP004608.1-204ENST00000532886 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
AP004608.1-204ENST00000532886 CCDC34Q96HJ3 373 aa15.23■□□□□ 0.03
AP004608.1-204ENST00000532886 FLIIQ13045 1269 aa15.23■□□□□ 0.03
AP004608.1-204ENST00000532886 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
AP004608.1-204ENST00000532886 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
AP004608.1-204ENST00000532886 MCM2P49736 904 aa15.22■□□□□ 0.03
AP004608.1-204ENST00000532886 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
AP004608.1-204ENST00000532886 AACSQ86V21 672 aa15.22■□□□□ 0.03
AP004608.1-204ENST00000532886 NPATQ14207 1427 aa15.22■□□□□ 0.03
AP004608.1-204ENST00000532886 HIP1O00291 1037 aa15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 PRKCSHP14314 528 aaPredicted RBP15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 PSMA5P28066 241 aa15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 MSH6P52701 1360 aa15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 TRAK2O60296 914 aa15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 RALYLQ86SE5 291 aaKnown RBP15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 NUTM1Q86Y26 1132 aa15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 C8orf58Q8NAV2 365 aa15.21■□□□□ 0.03
AP004608.1-204ENST00000532886 PTPRCP08575 1304 aa15.21■□□□□ 0.02
AP004608.1-204ENST00000532886 K7ELQ4 463 aaPredicted RBP15.2■□□□□ 0.02
AP004608.1-204ENST00000532886 UNC13BO14795 1591 aa15.2■□□□□ 0.02
AP004608.1-204ENST00000532886 TPM4P67936 248 aa15.2■□□□□ 0.02
AP004608.1-204ENST00000532886 KCNA6P17658 529 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 ARHGAP45Q92619 1136 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 RLBP1P12271 317 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 FOSBP53539 338 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 RASSF8Q8NHQ8 419 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 TBX22Q9Y458 520 aa15.19■□□□□ 0.02
AP004608.1-204ENST00000532886 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
AP004608.1-204ENST00000532886 MX1P20591 662 aa15.18■□□□□ 0.02
AP004608.1-204ENST00000532886 BICD2Q8TD16 824 aa15.18■□□□□ 0.02
AP004608.1-204ENST00000532886 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
AP004608.1-204ENST00000532886 NFXL1Q6ZNB6 911 aa15.18■□□□□ 0.02
AP004608.1-204ENST00000532886 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
AP004608.1-204ENST00000532886 HMGB2P26583 209 aaKnown RBP15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 TSPYL6Q8N831 410 aa15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 TRIM29Q14134 588 aa15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 CHRNA2Q15822 529 aa15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 PTPRTO14522 1441 aa15.17■□□□□ 0.02
AP004608.1-204ENST00000532886 ANXA1P04083 346 aa15.16■□□□□ 0.02
AP004608.1-204ENST00000532886 VAMP4O75379 141 aa15.16■□□□□ 0.02
AP004608.1-204ENST00000532886 YEATS2Q9ULM3 1422 aa15.16■□□□□ 0.02
AP004608.1-204ENST00000532886 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
AP004608.1-204ENST00000532886 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
AP004608.1-204ENST00000532886 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
AP004608.1-204ENST00000532886 BECN2A8MW95 431 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 HDAC1Q13547 482 aaPredicted RBP15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 MRPL50Q8N5N7 158 aaKnown RBP15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 RSPH6AQ9H0K4 717 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 CEP126Q9P2H0 1117 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 PI4KAP2A4QPH2 592 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 PI4KAP1Q8N8J0 262 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 CCDC85AQ96PX6 553 aaPredicted RBP15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 MYD88Q99836 296 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 MAGI2Q86UL8 1455 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 ZFYVE16Q7Z3T8 1539 aa15.15■□□□□ 0.02
AP004608.1-204ENST00000532886 RAB11FIP3O75154 756 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 PRPF40AO75400 957 aaKnown RBP15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 KRT24Q2M2I5 525 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 MEIS3Q99687 375 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 GOLGA6L19H0YKK7 550 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 IQGAP3Q86VI3 1631 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 EYA1Q99502 592 aa15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 CWC22Q9HCG8 908 aaKnown RBP15.14■□□□□ 0.01
AP004608.1-204ENST00000532886 FLT4P35916 1363 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 GLRX3O76003 335 aaKnown RBP15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 HYPKQ9NX55 129 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 ERICH2A1L162 156 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 CAVIN1Q6NZI2 390 aaKnown RBP15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 BMP2KLQ5H9B9 411 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
AP004608.1-204ENST00000532886 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
AP004608.1-204ENST00000532886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
AP004608.1-204ENST00000532886 CREBRFQ8IUR6 639 aa15.12■□□□□ 0.01
AP004608.1-204ENST00000532886 TMOD3Q9NYL9 352 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms