RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 HDGFL2Q7Z4V5 671 aaPredicted RBP17.99■□□□□ 0.47
AP004550.1-201ENST00000532652 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
AP004550.1-201ENST00000532652 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 IP6K1Q92551 441 aa17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 LTV1Q96GA3 475 aaPredicted RBP17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 SLC12A5Q9H2X9 1139 aa17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 NSD2O96028 1365 aa17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 UBR3Q6ZT12 1888 aa17.98■□□□□ 0.47
AP004550.1-201ENST00000532652 A0A1W2PP64 1363 aa17.97■□□□□ 0.47
AP004550.1-201ENST00000532652 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
AP004550.1-201ENST00000532652 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
AP004550.1-201ENST00000532652 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
AP004550.1-201ENST00000532652 MEGF6O75095 1541 aa17.94■□□□□ 0.46
AP004550.1-201ENST00000532652 CCNL1Q9UK58 526 aaPredicted RBP17.94■□□□□ 0.46
AP004550.1-201ENST00000532652 MSH5O43196 834 aa17.93■□□□□ 0.46
AP004550.1-201ENST00000532652 TERF2IPQ9NYB0 399 aa17.93■□□□□ 0.46
AP004550.1-201ENST00000532652 KIF20BQ96Q89 1820 aa17.93■□□□□ 0.46
AP004550.1-201ENST00000532652 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
AP004550.1-201ENST00000532652 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
AP004550.1-201ENST00000532652 CARD11Q9BXL7 1154 aa17.92■□□□□ 0.46
AP004550.1-201ENST00000532652 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
AP004550.1-201ENST00000532652 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
AP004550.1-201ENST00000532652 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
AP004550.1-201ENST00000532652 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
AP004550.1-201ENST00000532652 HOXC9P31274 260 aa17.9■□□□□ 0.46
AP004550.1-201ENST00000532652 MSL1Q68DK7 614 aa17.9■□□□□ 0.46
AP004550.1-201ENST00000532652 USP47Q96K76 1375 aa17.9■□□□□ 0.46
AP004550.1-201ENST00000532652 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
AP004550.1-201ENST00000532652 FBLN1P23142 703 aa17.89■□□□□ 0.45
AP004550.1-201ENST00000532652 AMPHP49418 695 aa17.88■□□□□ 0.45
AP004550.1-201ENST00000532652 COG3Q96JB2 828 aa17.88■□□□□ 0.45
AP004550.1-201ENST00000532652 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
AP004550.1-201ENST00000532652 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
AP004550.1-201ENST00000532652 KIF13BQ9NQT8 1826 aa17.85■□□□□ 0.45
AP004550.1-201ENST00000532652 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 ADCY9O60503 1353 aa17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 NBPF6Q5VWK0 638 aa17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 NBPF4Q96M43 638 aa17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 GPBP1L1Q9HC44 474 aaPredicted RBP17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
AP004550.1-201ENST00000532652 RTL1A6NKG5 1358 aa17.83■□□□□ 0.45
AP004550.1-201ENST00000532652 CGNL1Q0VF96 1302 aa17.83■□□□□ 0.44
AP004550.1-201ENST00000532652 FLAD1Q8NFF5 587 aa17.82■□□□□ 0.44
AP004550.1-201ENST00000532652 BRCA1P38398 1863 aaKnown RBP17.82■□□□□ 0.44
AP004550.1-201ENST00000532652 PALLDQ8WX93 1383 aa17.81■□□□□ 0.44
AP004550.1-201ENST00000532652 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
AP004550.1-201ENST00000532652 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
AP004550.1-201ENST00000532652 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
AP004550.1-201ENST00000532652 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
AP004550.1-201ENST00000532652 HSPA6P17066 643 aa17.8■□□□□ 0.44
AP004550.1-201ENST00000532652 TATP17735 454 aaPredicted RBP17.8■□□□□ 0.44
AP004550.1-201ENST00000532652 KIAA1551Q9HCM1 1747 aa17.8■□□□□ 0.44
AP004550.1-201ENST00000532652 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
AP004550.1-201ENST00000532652 PCDH11XQ9BZA7 1347 aa17.78■□□□□ 0.44
AP004550.1-201ENST00000532652 PCDH11YQ9BZA8 1340 aa17.78■□□□□ 0.44
AP004550.1-201ENST00000532652 TESK2Q96S53 571 aa17.78■□□□□ 0.44
AP004550.1-201ENST00000532652 IGSF1Q8N6C5 1336 aa17.77■□□□□ 0.44
AP004550.1-201ENST00000532652 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
AP004550.1-201ENST00000532652 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
AP004550.1-201ENST00000532652 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
AP004550.1-201ENST00000532652 ANKRD26Q9UPS8 1709 aa17.76■□□□□ 0.43
AP004550.1-201ENST00000532652 AK7Q96M32 723 aa17.76■□□□□ 0.43
AP004550.1-201ENST00000532652 GGNBP2Q9H3C7 697 aa17.76■□□□□ 0.43
AP004550.1-201ENST00000532652 ARFGEF1Q9Y6D6 1849 aa17.76■□□□□ 0.43
AP004550.1-201ENST00000532652 CICQ96RK0 1608 aaPredicted RBP17.76■□□□□ 0.43
AP004550.1-201ENST00000532652 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
AP004550.1-201ENST00000532652 ST20-MTHFSA0A0A6YYL1 179 aa17.75■□□□□ 0.43
AP004550.1-201ENST00000532652 FYB1O15117 783 aa17.75■□□□□ 0.43
AP004550.1-201ENST00000532652 CYP27B1O15528 508 aa17.75■□□□□ 0.43
AP004550.1-201ENST00000532652 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
AP004550.1-201ENST00000532652 INSRP06213 1382 aa17.75■□□□□ 0.43
AP004550.1-201ENST00000532652 SBF1O95248 1867 aa17.74■□□□□ 0.43
AP004550.1-201ENST00000532652 PHF14O94880 888 aa17.74■□□□□ 0.43
AP004550.1-201ENST00000532652 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
AP004550.1-201ENST00000532652 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
AP004550.1-201ENST00000532652 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
AP004550.1-201ENST00000532652 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
AP004550.1-201ENST00000532652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
AP004550.1-201ENST00000532652 FLT4P35916 1363 aa17.72■□□□□ 0.43
AP004550.1-201ENST00000532652 PCNTO95613 3336 aa17.72■□□□□ 0.43
AP004550.1-201ENST00000532652 COL5A3P25940 1745 aaPredicted RBP17.72■□□□□ 0.43
AP004550.1-201ENST00000532652 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
AP004550.1-201ENST00000532652 KIF3CO14782 793 aa17.71■□□□□ 0.43
AP004550.1-201ENST00000532652 PIGBQ92521 554 aa17.71■□□□□ 0.43
AP004550.1-201ENST00000532652 WDR90Q96KV7 1748 aa17.71■□□□□ 0.43
AP004550.1-201ENST00000532652 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
AP004550.1-201ENST00000532652 SSFA2P28290 1259 aa17.7■□□□□ 0.42
AP004550.1-201ENST00000532652 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
AP004550.1-201ENST00000532652 KIF24Q5T7B8 1368 aa17.69■□□□□ 0.42
AP004550.1-201ENST00000532652 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
AP004550.1-201ENST00000532652 ZNF831Q5JPB2 1677 aa17.68■□□□□ 0.42
AP004550.1-201ENST00000532652 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
AP004550.1-201ENST00000532652 SIK1P57059 783 aa17.68■□□□□ 0.42
AP004550.1-201ENST00000532652 NCAPD2Q15021 1401 aa17.68■□□□□ 0.42
AP004550.1-201ENST00000532652 LINC00116Q8NCU8 138 aa17.68■□□□□ 0.42
AP004550.1-201ENST00000532652 NKX1-1Q15270 411 aaPredicted RBP17.66■□□□□ 0.42
AP004550.1-201ENST00000532652 PXDNLA1KZ92 1463 aa17.65■□□□□ 0.42
AP004550.1-201ENST00000532652 GNPATO15228 680 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms