RNA–Protein interactions for RNA: ENST00000532556.1

RSF1-211, Transcript of remodeling and spacing factor 1, humanhuman

TSL 3

Gene RSF1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-211ENST00000532556 ZNF594Q96JF6 807 aaPredicted RBP9.58□□□□□ -0.88
RSF1-211ENST00000532556 TRAIPQ9BWF2 469 aa9.58□□□□□ -0.88
RSF1-211ENST00000532556 ATP13A2Q9NQ11 1180 aa9.58□□□□□ -0.88
RSF1-211ENST00000532556 TLL2Q9Y6L7 1015 aa9.58□□□□□ -0.88
RSF1-211ENST00000532556 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
RSF1-211ENST00000532556 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
RSF1-211ENST00000532556 PDE4CQ08493 712 aa9.57□□□□□ -0.88
RSF1-211ENST00000532556 NOVA2Q9UNW9 492 aaKnown RBP9.57□□□□□ -0.88
RSF1-211ENST00000532556 NOD1Q9Y239 953 aa9.57□□□□□ -0.88
RSF1-211ENST00000532556 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L10C9JJH3 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L21D6R901 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 FSHRP23945 695 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 CRTC2Q53ET0 693 aaPredicted RBP9.56□□□□□ -0.88
RSF1-211ENST00000532556 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
RSF1-211ENST00000532556 USTQ9Y2C2 406 aa9.56□□□□□ -0.88
RSF1-211ENST00000532556 PSME1Q06323 249 aa9.55□□□□□ -0.88
RSF1-211ENST00000532556 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
RSF1-211ENST00000532556 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
RSF1-211ENST00000532556 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
RSF1-211ENST00000532556 LZTS3O60299 673 aaPredicted RBP9.54□□□□□ -0.88
RSF1-211ENST00000532556 INTS6LQ5JSJ4 861 aaKnown RBP9.54□□□□□ -0.88
RSF1-211ENST00000532556 TRIM50Q86XT4 487 aa9.54□□□□□ -0.88
RSF1-211ENST00000532556 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
RSF1-211ENST00000532556 ESF1Q9H501 851 aaKnown RBP9.54□□□□□ -0.88
RSF1-211ENST00000532556 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
RSF1-211ENST00000532556 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
RSF1-211ENST00000532556 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
RSF1-211ENST00000532556 ESPNB1AK53 854 aa9.53□□□□□ -0.88
RSF1-211ENST00000532556 GTF2IP78347 998 aa9.53□□□□□ -0.88
RSF1-211ENST00000532556 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
RSF1-211ENST00000532556 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
RSF1-211ENST00000532556 DNAAF2Q9NVR5 837 aaKnown RBP9.53□□□□□ -0.88
RSF1-211ENST00000532556 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
RSF1-211ENST00000532556 ATP1A2P50993 1020 aa9.52□□□□□ -0.89
RSF1-211ENST00000532556 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
RSF1-211ENST00000532556 MRGPRX2Q96LB1 330 aa9.52□□□□□ -0.89
RSF1-211ENST00000532556 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
RSF1-211ENST00000532556 MAP4K5Q9Y4K4 846 aa9.52□□□□□ -0.89
RSF1-211ENST00000532556 ERVH48-1M5A8F1 160 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 GMPRP36959 345 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 CLDN10P78369 228 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 USP4Q13107 963 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 PTK7Q13308 1070 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 FAM200AQ8TCP9 573 aa9.51□□□□□ -0.89
RSF1-211ENST00000532556 WNT7AO00755 349 aa9.5□□□□□ -0.89
RSF1-211ENST00000532556 DPYDQ12882 1025 aa9.5□□□□□ -0.89
RSF1-211ENST00000532556 IRF7Q92985 503 aa9.5□□□□□ -0.89
RSF1-211ENST00000532556 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
RSF1-211ENST00000532556 CYLDQ9NQC7 956 aa9.5□□□□□ -0.89
RSF1-211ENST00000532556 TMEM88BA6NKF7 163 aa9.49□□□□□ -0.89
RSF1-211ENST00000532556 SCTRP47872 440 aa9.49□□□□□ -0.89
RSF1-211ENST00000532556 ELOAQ14241 798 aaKnown RBP9.49□□□□□ -0.89
RSF1-211ENST00000532556 ANKMY2Q8IV38 441 aa9.49□□□□□ -0.89
RSF1-211ENST00000532556 TPCN2Q8NHX9 752 aa9.49□□□□□ -0.89
RSF1-211ENST00000532556 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
RSF1-211ENST00000532556 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
RSF1-211ENST00000532556 KIAA1024Q9UPX6 916 aa9.49□□□□□ -0.89
RSF1-211ENST00000532556 ADH1CP00326 375 aa9.48□□□□□ -0.89
RSF1-211ENST00000532556 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
RSF1-211ENST00000532556 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
RSF1-211ENST00000532556 CCDC102BQ68D86 513 aa9.47□□□□□ -0.89
RSF1-211ENST00000532556 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
RSF1-211ENST00000532556 CCDC116Q8IYX3 515 aa9.47□□□□□ -0.89
RSF1-211ENST00000532556 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
RSF1-211ENST00000532556 GRM5P41594 1212 aa9.46□□□□□ -0.9
RSF1-211ENST00000532556 DHX9Q08211 1270 aaKnown RBP9.46□□□□□ -0.9
RSF1-211ENST00000532556 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
RSF1-211ENST00000532556 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
RSF1-211ENST00000532556 SIAH2O43255 324 aa9.45□□□□□ -0.9
RSF1-211ENST00000532556 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
RSF1-211ENST00000532556 WASF2Q9Y6W5 498 aa9.45□□□□□ -0.9
RSF1-211ENST00000532556 SFI1A8K8P3 1242 aa9.44□□□□□ -0.9
RSF1-211ENST00000532556 LGR5O75473 907 aa9.44□□□□□ -0.9
RSF1-211ENST00000532556 BRD1O95696 1058 aa9.44□□□□□ -0.9
RSF1-211ENST00000532556 NR3C2P08235 984 aa9.44□□□□□ -0.9
RSF1-211ENST00000532556 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
RSF1-211ENST00000532556 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
RSF1-211ENST00000532556 PCDHGA11Q9Y5H2 935 aa9.44□□□□□ -0.9
RSF1-211ENST00000532556 SMPD1P17405 629 aa9.43□□□□□ -0.9
RSF1-211ENST00000532556 SEC13P55735 322 aa9.43□□□□□ -0.9
RSF1-211ENST00000532556 NR5A1Q13285 461 aa9.43□□□□□ -0.9
RSF1-211ENST00000532556 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
RSF1-211ENST00000532556 SIX5Q8N196 739 aa9.43□□□□□ -0.9
RSF1-211ENST00000532556 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
RSF1-211ENST00000532556 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
RSF1-211ENST00000532556 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
RSF1-211ENST00000532556 STAU1O95793 577 aaKnown RBP9.41□□□□□ -0.9
RSF1-211ENST00000532556 NNTQ13423 1086 aa9.41□□□□□ -0.9
RSF1-211ENST00000532556 MPNDQ8N594 471 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms