RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 CTNNBL1Q8WYA6 563 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-231ENST00000532463 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 NUP62CLQ9H1M0 184 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 HYPKQ9NX55 129 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 TTC31Q49AM3 519 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-231ENST00000532463 APBB1IPQ7Z5R6 666 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-231ENST00000532463 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 PPFIBP2Q8ND30 876 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 CCDC110Q8TBZ0 833 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 TBC1D2BQ9UPU7 963 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 ANKRD1Q15327 319 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 RAI14Q9P0K7 980 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 NACADO15069 1562 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 ATP2C2O75185 946 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 CWC25Q9NXE8 425 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-231ENST00000532463 RRP7AQ9Y3A4 280 aaKnown RBP9.47□□□□□ -0.89
CTNND1-231ENST00000532463 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 FSD1Q9BTV5 496 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 LNPKQ9C0E8 428 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 SSX2IPQ9Y2D8 614 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 IKBKGQ9Y6K9 419 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 CASQ2O14958 399 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-231ENST00000532463 KDM4AO75164 1064 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 CFAP58Q5T655 872 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 ANKS4BQ8N8V4 417 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.89
CTNND1-231ENST00000532463 DNAJC21Q5F1R6 531 aaKnown RBP9.46□□□□□ -0.9
CTNND1-231ENST00000532463 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-231ENST00000532463 MYBBP1AQ9BQG0 1328 aaKnown RBP9.46□□□□□ -0.9
CTNND1-231ENST00000532463 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
CTNND1-231ENST00000532463 CCDC155Q8N6L0 562 aa9.46□□□□□ -0.9
CTNND1-231ENST00000532463 MSH5O43196 834 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
CTNND1-231ENST00000532463 CTNNA2P26232 953 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 NAA25Q14CX7 972 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 FKBP15Q5T1M5 1219 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 NGDNQ8NEJ9 315 aaKnown RBP9.45□□□□□ -0.9
CTNND1-231ENST00000532463 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 RSPH14Q9UHP6 348 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 TTC36A6NLP5 189 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 HSF2BPO75031 334 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 SETDB1Q15047 1291 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 SEPT8Q92599 483 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 TTC14Q96N46 770 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
CTNND1-231ENST00000532463 KRT222Q8N1A0 295 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 SOGA1O94964 1423 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 ZNF853P0CG23 659 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 PSMC4P43686 418 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 CCDC121Q6ZUS5 278 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 ALS2CR12Q96Q35 445 aa9.45□□□□□ -0.9
CTNND1-231ENST00000532463 KIF15Q9NS87 1388 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 A0A1W2PRG0 241 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 NEMFO60524 1076 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 SLU7O95391 586 aaKnown RBP9.44□□□□□ -0.9
CTNND1-231ENST00000532463 FKBP5Q13451 457 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-231ENST00000532463 CKAP4Q07065 602 aaKnown RBP9.44□□□□□ -0.9
CTNND1-231ENST00000532463 ZBTB17Q13105 803 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 SPATA32Q96LK8 384 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 FERMT1Q9BQL6 677 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 IQCGQ9H095 443 aaKnown RBP9.44□□□□□ -0.9
CTNND1-231ENST00000532463 MACROD2A1Z1Q3 448 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 SSBP05455 408 aaKnown RBP eCLIP9.44□□□□□ -0.91e-7■■■■■ 26.8
CTNND1-231ENST00000532463 MATR3P43243 847 aaKnown RBP eCLIP9.44□□□□□ -0.96e-7■■■■□ 22.1
CTNND1-231ENST00000532463 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 L3MBTL2Q969R5 705 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 MPHOSPH9Q99550 1183 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 FAM114A2Q9NRY5 505 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 ZBED9Q6R2W3 1325 aa9.44□□□□□ -0.9
CTNND1-231ENST00000532463 CEP135Q66GS9 1140 aa9.43□□□□□ -0.9
CTNND1-231ENST00000532463 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
CTNND1-231ENST00000532463 LMNTD2Q8IXW0 634 aa9.43□□□□□ -0.9
CTNND1-231ENST00000532463 USH1CQ9Y6N9 552 aa9.43□□□□□ -0.9
CTNND1-231ENST00000532463 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
CTNND1-231ENST00000532463 MGEA5O60502 916 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 STMN4Q9H169 189 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-231ENST00000532463 VCX3BQ9H321 246 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 CYP46A1Q9Y6A2 500 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 CDKL5O76039 1030 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 FHAD1B1AJZ9 1412 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 MPHOSPH10O00566 681 aaKnown RBP9.42□□□□□ -0.9
CTNND1-231ENST00000532463 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 EBAG9O00559 213 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 TOP1P11387 765 aaKnown RBP9.42□□□□□ -0.9
CTNND1-231ENST00000532463 ACTN2P35609 894 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 C10orf67Q8IYJ2 551 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 ATRIPQ8WXE1 791 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-231ENST00000532463 GOLIM4O00461 696 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 NDC80O14777 642 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 LIG1P18858 919 aa9.42□□□□□ -0.9
CTNND1-231ENST00000532463 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
CTNND1-231ENST00000532463 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-231ENST00000532463 YEATS4O95619 227 aa9.41□□□□□ -0.9
CTNND1-231ENST00000532463 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-231ENST00000532463 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms