RNA–Protein interactions for RNA: ENST00000532367.1

SMPD1-207, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-207ENST00000532367 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
SMPD1-207ENST00000532367 CARD10Q9BWT7 1032 aa14.85□□□□□ -0.03
SMPD1-207ENST00000532367 MYH16Q9H6N6 1097 aa14.85□□□□□ -0.03
SMPD1-207ENST00000532367 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
SMPD1-207ENST00000532367 STRN4Q9NRL3 753 aa14.85□□□□□ -0.03
SMPD1-207ENST00000532367 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
SMPD1-207ENST00000532367 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
SMPD1-207ENST00000532367 GNAT3A8MTJ3 354 aa14.83□□□□□ -0.04
SMPD1-207ENST00000532367 LARP1Q6PKG0 1096 aaKnown RBP14.83□□□□□ -0.04
SMPD1-207ENST00000532367 GNAI1P63096 354 aa14.82□□□□□ -0.04
SMPD1-207ENST00000532367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMPD1-207ENST00000532367 CRB1P82279 1406 aa14.82□□□□□ -0.04
SMPD1-207ENST00000532367 AKAP4Q5JQC9 854 aa14.81□□□□□ -0.04
SMPD1-207ENST00000532367 ZNF530Q6P9A1 599 aaPredicted RBP14.81□□□□□ -0.04
SMPD1-207ENST00000532367 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
SMPD1-207ENST00000532367 SPG7Q9UQ90 795 aa14.81□□□□□ -0.04
SMPD1-207ENST00000532367 MAP3K5Q99683 1374 aa14.81□□□□□ -0.04
SMPD1-207ENST00000532367 PLCH1Q4KWH8 1693 aa14.81□□□□□ -0.04
SMPD1-207ENST00000532367 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
SMPD1-207ENST00000532367 C1orf141Q5JVX7 400 aa14.8□□□□□ -0.04
SMPD1-207ENST00000532367 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
SMPD1-207ENST00000532367 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
SMPD1-207ENST00000532367 MEGF6O75095 1541 aa14.79□□□□□ -0.04
SMPD1-207ENST00000532367 MCM10Q7L590 875 aa14.79□□□□□ -0.04
SMPD1-207ENST00000532367 CFAP44Q96MT7 982 aa14.79□□□□□ -0.04
SMPD1-207ENST00000532367 RCAN3Q9UKA8 241 aa14.79□□□□□ -0.04
SMPD1-207ENST00000532367 PARP4Q9UKK3 1724 aaKnown RBP14.79□□□□□ -0.04
SMPD1-207ENST00000532367 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
SMPD1-207ENST00000532367 SUPT16HQ9Y5B9 1047 aaKnown RBP14.79□□□□□ -0.04
SMPD1-207ENST00000532367 SLIT2O94813 1529 aa14.78□□□□□ -0.04
SMPD1-207ENST00000532367 FANCIQ9NVI1 1328 aa14.78□□□□□ -0.04
SMPD1-207ENST00000532367 ZNF853P0CG23 659 aa14.78□□□□□ -0.04
SMPD1-207ENST00000532367 IL2RBP14784 551 aa14.78□□□□□ -0.04
SMPD1-207ENST00000532367 NRAPQ86VF7 1730 aa14.78□□□□□ -0.04
SMPD1-207ENST00000532367 OVOS2A0A0G2JMS6 1433 aa14.77□□□□□ -0.04
SMPD1-207ENST00000532367 IL17REQ8NFR9 667 aa14.77□□□□□ -0.05
SMPD1-207ENST00000532367 NGLY1Q96IV0 654 aa14.77□□□□□ -0.05
SMPD1-207ENST00000532367 PKD1L3Q7Z443 1732 aa14.77□□□□□ -0.05
SMPD1-207ENST00000532367 CT47B1P0C2W7 299 aaPredicted RBP14.76□□□□□ -0.05
SMPD1-207ENST00000532367 IFNL2Q8IZJ0 200 aa14.76□□□□□ -0.05
SMPD1-207ENST00000532367 ZCRB1Q8TBF4 217 aaKnown RBP14.76□□□□□ -0.05
SMPD1-207ENST00000532367 TSR2Q969E8 191 aaKnown RBP14.76□□□□□ -0.05
SMPD1-207ENST00000532367 C8orf37Q96NL8 207 aa14.76□□□□□ -0.05
SMPD1-207ENST00000532367 CHL1O00533 1208 aa14.75□□□□□ -0.05
SMPD1-207ENST00000532367 NEFLP07196 543 aa14.75□□□□□ -0.05
SMPD1-207ENST00000532367 HSP90AB1P08238 724 aaKnown RBP14.75□□□□□ -0.05
SMPD1-207ENST00000532367 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
SMPD1-207ENST00000532367 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
SMPD1-207ENST00000532367 FNBP4Q8N3X1 1017 aaPredicted RBP14.75□□□□□ -0.05
SMPD1-207ENST00000532367 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
SMPD1-207ENST00000532367 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
SMPD1-207ENST00000532367 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
SMPD1-207ENST00000532367 PHKG2P15735 406 aa14.74□□□□□ -0.05
SMPD1-207ENST00000532367 TAF7Q15545 349 aaPredicted RBP14.74□□□□□ -0.05
SMPD1-207ENST00000532367 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
SMPD1-207ENST00000532367 MPRIPQ6WCQ1 1025 aa14.74□□□□□ -0.05
SMPD1-207ENST00000532367 CDCA7Q9BWT1 371 aaPredicted RBP14.74□□□□□ -0.05
SMPD1-207ENST00000532367 MBIPQ9NS73 344 aa14.74□□□□□ -0.05
SMPD1-207ENST00000532367 THRAP3Q9Y2W1 955 aaKnown RBP14.74□□□□□ -0.05
SMPD1-207ENST00000532367 LRRC37A3O60309 1634 aa14.74□□□□□ -0.05
SMPD1-207ENST00000532367 LRP6O75581 1613 aa14.74□□□□□ -0.05
SMPD1-207ENST00000532367 CEMIPQ8WUJ3 1361 aa14.73□□□□□ -0.05
SMPD1-207ENST00000532367 VIRMAQ69YN4 1812 aaKnown RBP14.73□□□□□ -0.05
SMPD1-207ENST00000532367 SPATA31A1Q5TZJ5 1347 aa14.73□□□□□ -0.05
SMPD1-207ENST00000532367 LGR6Q9HBX8 967 aa14.73□□□□□ -0.05
SMPD1-207ENST00000532367 SPATA31A5Q5VU36 1347 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 SPATA31A7Q8IWB4 1347 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 TEFQ10587 303 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 GTF3C3Q9Y5Q9 886 aa14.72□□□□□ -0.05
SMPD1-207ENST00000532367 CYP27B1O15528 508 aa14.71□□□□□ -0.05
SMPD1-207ENST00000532367 VPS72Q15906 364 aa14.71□□□□□ -0.05
SMPD1-207ENST00000532367 DCAF5Q96JK2 942 aa14.71□□□□□ -0.05
SMPD1-207ENST00000532367 CCDC9Q9Y3X0 531 aaKnown RBP14.71□□□□□ -0.05
SMPD1-207ENST00000532367 DISP2A7MBM2 1401 aa14.71□□□□□ -0.05
SMPD1-207ENST00000532367 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.06
SMPD1-207ENST00000532367 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
SMPD1-207ENST00000532367 BCL9LQ86UU0 1499 aa14.7□□□□□ -0.06
SMPD1-207ENST00000532367 ZNF428Q96B54 188 aa14.7□□□□□ -0.06
SMPD1-207ENST00000532367 USP21Q9UK80 565 aa14.7□□□□□ -0.06
SMPD1-207ENST00000532367 WNK3Q9BYP7 1800 aa14.7□□□□□ -0.06
SMPD1-207ENST00000532367 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.69□□□□□ -0.06
SMPD1-207ENST00000532367 EXOC5O00471 708 aa14.69□□□□□ -0.06
SMPD1-207ENST00000532367 RRP1P56182 461 aaKnown RBP14.69□□□□□ -0.06
SMPD1-207ENST00000532367 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
SMPD1-207ENST00000532367 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
SMPD1-207ENST00000532367 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.69□□□□□ -0.06
SMPD1-207ENST00000532367 MIS18AQ9NYP9 233 aa14.69□□□□□ -0.06
SMPD1-207ENST00000532367 RARSP54136 660 aaKnown RBP14.68□□□□□ -0.06
SMPD1-207ENST00000532367 DDX54Q8TDD1 881 aaKnown RBP14.68□□□□□ -0.06
SMPD1-207ENST00000532367 SHANK3Q9BYB0 1731 aa14.68□□□□□ -0.06
SMPD1-207ENST00000532367 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-207ENST00000532367 BTBD11A6QL63 1104 aa14.67□□□□□ -0.06
SMPD1-207ENST00000532367 VAMP4O75379 141 aa14.67□□□□□ -0.06
SMPD1-207ENST00000532367 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-207ENST00000532367 C8orf58Q8NAV2 365 aa14.67□□□□□ -0.06
SMPD1-207ENST00000532367 AFF2P51816 1311 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms