RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PSMA5P28066 241 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 METTL24Q5JXM2 366 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 MYD88Q99836 296 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 SMC3Q9UQE7 1217 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 POLD1P28340 1107 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPRK-221ENST00000532331 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 CHMP5Q9NZZ3 219 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPRK-221ENST00000532331 LRP2BPQ9P2M1 347 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 CDC45O75419 566 aa13.56□□□□□ -0.24
PTPRK-221ENST00000532331 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
PTPRK-221ENST00000532331 ST5P78524 1137 aa13.55□□□□□ -0.24
PTPRK-221ENST00000532331 PRM3Q9NNZ6 103 aa13.55□□□□□ -0.24
PTPRK-221ENST00000532331 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
PTPRK-221ENST00000532331 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
PTPRK-221ENST00000532331 PDE4CQ08493 712 aa13.55□□□□□ -0.24
PTPRK-221ENST00000532331 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
PTPRK-221ENST00000532331 NSD2O96028 1365 aa13.55□□□□□ -0.24
PTPRK-221ENST00000532331 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-221ENST00000532331 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
PTPRK-221ENST00000532331 IFIT1P09914 478 aaKnown RBP13.54□□□□□ -0.24
PTPRK-221ENST00000532331 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
PTPRK-221ENST00000532331 BICD2Q8TD16 824 aa13.54□□□□□ -0.24
PTPRK-221ENST00000532331 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
PTPRK-221ENST00000532331 C22orf23Q9BZE7 217 aa13.54□□□□□ -0.24
PTPRK-221ENST00000532331 VPS37CA5D8V6 355 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-221ENST00000532331 NUCB2P80303 420 aa13.54□□□□□ -0.24
PTPRK-221ENST00000532331 IL2RBP14784 551 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
PTPRK-221ENST00000532331 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 AACSQ86V21 672 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 ANKRD20A12PQ8NF67 263 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-221ENST00000532331 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
PTPRK-221ENST00000532331 C6orf229H3BNL8 230 aa13.52□□□□□ -0.24
PTPRK-221ENST00000532331 GPTP24298 496 aa13.52□□□□□ -0.24
PTPRK-221ENST00000532331 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.24
PTPRK-221ENST00000532331 ABCF2Q9UG63 623 aa13.52□□□□□ -0.24
PTPRK-221ENST00000532331 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
PTPRK-221ENST00000532331 FOSBP53539 338 aa13.52□□□□□ -0.25
PTPRK-221ENST00000532331 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.25
PTPRK-221ENST00000532331 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
PTPRK-221ENST00000532331 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-221ENST00000532331 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
PTPRK-221ENST00000532331 NEO1Q92859 1461 aa13.52□□□□□ -0.25
PTPRK-221ENST00000532331 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
PTPRK-221ENST00000532331 GSE1Q14687 1217 aa13.51□□□□□ -0.25
PTPRK-221ENST00000532331 ARID3AQ99856 593 aa13.51□□□□□ -0.25
PTPRK-221ENST00000532331 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
PTPRK-221ENST00000532331 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
PTPRK-221ENST00000532331 NBPF5PQ86XG9 351 aaPredicted RBP13.51□□□□□ -0.25
PTPRK-221ENST00000532331 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
PTPRK-221ENST00000532331 ZFYVE16Q7Z3T8 1539 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
PTPRK-221ENST00000532331 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 DISP1Q96F81 1524 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 TDO2P48775 406 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 TMEM132AQ24JP5 1023 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
PTPRK-221ENST00000532331 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
PTPRK-221ENST00000532331 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
PTPRK-221ENST00000532331 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
PTPRK-221ENST00000532331 FANCIQ9NVI1 1328 aa13.49□□□□□ -0.25
PTPRK-221ENST00000532331 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
PTPRK-221ENST00000532331 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
PTPRK-221ENST00000532331 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
PTPRK-221ENST00000532331 KDM4AO75164 1064 aa13.49□□□□□ -0.25
PTPRK-221ENST00000532331 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
PTPRK-221ENST00000532331 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
PTPRK-221ENST00000532331 TRPM2O94759 1503 aa13.49□□□□□ -0.25
PTPRK-221ENST00000532331 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
PTPRK-221ENST00000532331 BCAR3O75815 825 aa13.48□□□□□ -0.25
PTPRK-221ENST00000532331 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
PTPRK-221ENST00000532331 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
PTPRK-221ENST00000532331 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
PTPRK-221ENST00000532331 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-221ENST00000532331 SLC5A1P13866 664 aa13.48□□□□□ -0.25
PTPRK-221ENST00000532331 SLF2Q8IX21 1173 aa13.48□□□□□ -0.25
PTPRK-221ENST00000532331 SLAIN2Q9P270 581 aa13.48□□□□□ -0.25
PTPRK-221ENST00000532331 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 USP5P45974 858 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-221ENST00000532331 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
PTPRK-221ENST00000532331 GCP02774 474 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 ZNF287Q9HBT7 754 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 DNAAF4Q8WXU2 420 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
PTPRK-221ENST00000532331 AIDAQ96BJ3 306 aa13.46□□□□□ -0.25
PTPRK-221ENST00000532331 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms