RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 MYO5CQ9NQX4 1742 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 MCTP1Q6DN14 999 aa9.67□□□□□ -0.86
CTNND1-230ENST00000532245 CNTROBQ8N137 903 aa9.67□□□□□ -0.86
CTNND1-230ENST00000532245 SF3A1Q15459 793 aaKnown RBP9.67□□□□□ -0.86
CTNND1-230ENST00000532245 MAGI3Q5TCQ9 1506 aa9.67□□□□□ -0.86
CTNND1-230ENST00000532245 EIF4A2Q14240 407 aaKnown RBP9.67□□□□□ -0.86
CTNND1-230ENST00000532245 TMEM94Q12767 1356 aa9.67□□□□□ -0.86
CTNND1-230ENST00000532245 HSP90AB3PQ58FF7 597 aa9.67□□□□□ -0.86
CTNND1-230ENST00000532245 RRP12Q5JTH9 1297 aaKnown RBP9.67□□□□□ -0.86
CTNND1-230ENST00000532245 METTL24Q5JXM2 366 aa9.67□□□□□ -0.86
CTNND1-230ENST00000532245 F6X3S4 739 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 ZNF335Q9H4Z2 1342 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 GOLGA6L6A8MZA4 724 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 KDM4AO75164 1064 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 ANXA1P04083 346 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 SNRPA1P09661 255 aaKnown RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 RAI14Q9P0K7 980 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 KDM6BO15054 1643 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 AACSQ86V21 672 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-230ENST00000532245 TRIM29Q14134 588 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 TTC37Q6PGP7 1564 aa9.66□□□□□ -0.86
CTNND1-230ENST00000532245 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
CTNND1-230ENST00000532245 NBPF5PQ86XG9 351 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-230ENST00000532245 CREBRFQ8IUR6 639 aa9.65□□□□□ -0.86
CTNND1-230ENST00000532245 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
CTNND1-230ENST00000532245 CT47B1P0C2W7 299 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-230ENST00000532245 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.86
CTNND1-230ENST00000532245 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.65□□□□□ -0.861e-7■■■□□ 16.3
CTNND1-230ENST00000532245 HYPKQ9NX55 129 aa9.65□□□□□ -0.86
CTNND1-230ENST00000532245 ABCF2Q9UG63 623 aa9.65□□□□□ -0.86
CTNND1-230ENST00000532245 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-230ENST00000532245 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
CTNND1-230ENST00000532245 C6orf229H3BNL8 230 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 HOXC9P31274 260 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 FOSBP53539 338 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 CCDC34Q96HJ3 373 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 A0A087WZG4 1122 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 IL1RAPL2Q9NP60 686 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 LRP2BPQ9P2M1 347 aa9.65□□□□□ -0.87
CTNND1-230ENST00000532245 PAXIP1Q6ZW49 1069 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-230ENST00000532245 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 FLT4P35916 1363 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 PZPP20742 1482 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 SLC3A2P08195 630 aaKnown RBP9.64□□□□□ -0.87
CTNND1-230ENST00000532245 ST5P78524 1137 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 IFIT5Q13325 482 aaKnown RBP9.64□□□□□ -0.87
CTNND1-230ENST00000532245 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-230ENST00000532245 GBP4Q96PP9 640 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 MAGI2Q86UL8 1455 aa9.64□□□□□ -0.87
CTNND1-230ENST00000532245 RALGAPBQ86X10 1494 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 POLD1P28340 1107 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 DNAAF4Q8WXU2 420 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 IP6K1Q92551 441 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 CHMP4CQ96CF2 233 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 MAP3K2Q9Y2U5 619 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 ADGRL2O95490 1459 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 SIRT1Q96EB6 747 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
CTNND1-230ENST00000532245 SLFN5Q08AF3 891 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 DDX46Q7L014 1031 aaKnown RBP9.63□□□□□ -0.87
CTNND1-230ENST00000532245 SETDB2Q96T68 719 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 EYA1Q99502 592 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 TMOD2Q9NZR1 351 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 UGGT1Q9NYU2 1555 aa9.63□□□□□ -0.87
CTNND1-230ENST00000532245 PPP1R42Q7Z4L9 355 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 KAT6BQ8WYB5 2073 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
CTNND1-230ENST00000532245 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
CTNND1-230ENST00000532245 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 PDE3AQ14432 1141 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 SSH1Q8WYL5 1049 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 AAMPQ13685 434 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 MVPQ14764 893 aaKnown RBP9.62□□□□□ -0.87
CTNND1-230ENST00000532245 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CTNND1-230ENST00000532245 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 PCDH11XQ9BZA7 1347 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 PCDH11YQ9BZA8 1340 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 ANKRD18BA2A2Z9 1011 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
CTNND1-230ENST00000532245 PLEKHH1Q9ULM0 1364 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 FLIIQ13045 1269 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-230ENST00000532245 MBD5Q9P267 1494 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 MLH3Q9UHC1 1453 aa9.61□□□□□ -0.87
CTNND1-230ENST00000532245 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms