RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
NECTIN1-207ENST00000532197 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
NECTIN1-207ENST00000532197 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
NECTIN1-207ENST00000532197 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
NECTIN1-207ENST00000532197 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
NECTIN1-207ENST00000532197 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
NECTIN1-207ENST00000532197 MEGF6O75095 1541 aa12.4□□□□□ -0.42
NECTIN1-207ENST00000532197 BTAF1O14981 1849 aa12.39□□□□□ -0.43
NECTIN1-207ENST00000532197 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
NECTIN1-207ENST00000532197 SPON1Q9HCB6 807 aa12.39□□□□□ -0.43
NECTIN1-207ENST00000532197 KCNQ2O43526 872 aa12.38□□□□□ -0.43
NECTIN1-207ENST00000532197 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
NECTIN1-207ENST00000532197 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
NECTIN1-207ENST00000532197 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
NECTIN1-207ENST00000532197 TATP17735 454 aaPredicted RBP12.37□□□□□ -0.43
NECTIN1-207ENST00000532197 PROM2Q8N271 834 aa12.36□□□□□ -0.43
NECTIN1-207ENST00000532197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
NECTIN1-207ENST00000532197 ITGB4P16144 1822 aa12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 EYA1Q99502 592 aa12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
NECTIN1-207ENST00000532197 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
NECTIN1-207ENST00000532197 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
NECTIN1-207ENST00000532197 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
NECTIN1-207ENST00000532197 PTF1AQ7RTS3 328 aa12.33□□□□□ -0.44
NECTIN1-207ENST00000532197 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
NECTIN1-207ENST00000532197 PPP1R1BQ9UD71 204 aaPredicted RBP12.33□□□□□ -0.44
NECTIN1-207ENST00000532197 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
NECTIN1-207ENST00000532197 LY75O60449 1722 aa12.33□□□□□ -0.44
NECTIN1-207ENST00000532197 SLC15A2Q16348 729 aa12.32□□□□□ -0.44
NECTIN1-207ENST00000532197 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
NECTIN1-207ENST00000532197 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
NECTIN1-207ENST00000532197 KDRP35968 1356 aa12.31□□□□□ -0.44
NECTIN1-207ENST00000532197 CASZ1Q86V15 1759 aa12.31□□□□□ -0.44
NECTIN1-207ENST00000532197 DCAF8L1A6NGE4 600 aa12.31□□□□□ -0.44
NECTIN1-207ENST00000532197 MTHFSP49914 203 aa12.31□□□□□ -0.44
NECTIN1-207ENST00000532197 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
NECTIN1-207ENST00000532197 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
NECTIN1-207ENST00000532197 CYP27B1O15528 508 aa12.29□□□□□ -0.44
NECTIN1-207ENST00000532197 IL13P35225 146 aa12.29□□□□□ -0.44
NECTIN1-207ENST00000532197 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
NECTIN1-207ENST00000532197 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
NECTIN1-207ENST00000532197 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
NECTIN1-207ENST00000532197 PRIM1P49642 420 aaKnown RBP12.28□□□□□ -0.44
NECTIN1-207ENST00000532197 AMOTQ4VCS5 1084 aa12.28□□□□□ -0.44
NECTIN1-207ENST00000532197 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
NECTIN1-207ENST00000532197 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
NECTIN1-207ENST00000532197 PAPPAQ13219 1627 aa12.28□□□□□ -0.44
NECTIN1-207ENST00000532197 COL3A1P02461 1466 aaPredicted RBP12.27□□□□□ -0.44
NECTIN1-207ENST00000532197 DIAPH1O60610 1272 aaKnown RBP12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 PTGER2P43116 358 aa12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 SCN11AQ9UI33 1791 aa12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.45
NECTIN1-207ENST00000532197 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
NECTIN1-207ENST00000532197 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 PHKG2P15735 406 aa12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 SLC16A10Q8TF71 515 aa12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
NECTIN1-207ENST00000532197 ZBTB7AO95365 584 aa12.24□□□□□ -0.45
NECTIN1-207ENST00000532197 C5P01031 1676 aa12.24□□□□□ -0.45
NECTIN1-207ENST00000532197 YY1P25490 414 aa12.24□□□□□ -0.45
NECTIN1-207ENST00000532197 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
NECTIN1-207ENST00000532197 PDGFDQ9GZP0 370 aaPredicted RBP12.24□□□□□ -0.45
NECTIN1-207ENST00000532197 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NECTIN1-207ENST00000532197 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
NECTIN1-207ENST00000532197 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
NECTIN1-207ENST00000532197 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
NECTIN1-207ENST00000532197 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 C1orf141Q5JVX7 400 aa12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 LRRC4BQ9NT99 713 aa12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
NECTIN1-207ENST00000532197 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
NECTIN1-207ENST00000532197 SYT17Q9BSW7 474 aa12.21□□□□□ -0.45
NECTIN1-207ENST00000532197 NUDCQ9Y266 331 aa12.21□□□□□ -0.45
NECTIN1-207ENST00000532197 CNGB1Q14028 1251 aaPredicted RBP12.2□□□□□ -0.46
NECTIN1-207ENST00000532197 ZNF827Q17R98 1081 aa12.2□□□□□ -0.46
NECTIN1-207ENST00000532197 PIGBQ92521 554 aa12.2□□□□□ -0.46
NECTIN1-207ENST00000532197 ARXQ96QS3 562 aa12.2□□□□□ -0.46
NECTIN1-207ENST00000532197 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
NECTIN1-207ENST00000532197 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
NECTIN1-207ENST00000532197 PALLDQ8WX93 1383 aa12.19□□□□□ -0.46
NECTIN1-207ENST00000532197 RALBP1Q15311 655 aa12.19□□□□□ -0.46
NECTIN1-207ENST00000532197 AKAP4Q5JQC9 854 aa12.19□□□□□ -0.46
NECTIN1-207ENST00000532197 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
NECTIN1-207ENST00000532197 KDM6AO15550 1401 aaPredicted RBP12.19□□□□□ -0.46
NECTIN1-207ENST00000532197 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
NECTIN1-207ENST00000532197 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms