RNA–Protein interactions for RNA: ENST00000531914.5

MS4A6A-215, Transcript of membrane spanning 4-domains A6A, human

TSL 2

Gene MS4A6A, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-215	ENST00000531914	BCL9L	Q86UU0	1499 aa		13.48	□□□□□ -0.25
MS4A6A-215	ENST00000531914	ARHGEF10	O15013	1369 aa		13.48	□□□□□ -0.25
MS4A6A-215	ENST00000531914	CARD11	Q9BXL7	1154 aa		13.48	□□□□□ -0.25
MS4A6A-215	ENST00000531914	USP21	Q9UK80	565 aa		13.48	□□□□□ -0.25
MS4A6A-215	ENST00000531914	PPIP5K1	Q6PFW1	1433 aa		13.47	□□□□□ -0.25
MS4A6A-215	ENST00000531914	CRYBG1	Q9Y4K1	1723 aa		13.47	□□□□□ -0.25
MS4A6A-215	ENST00000531914	RXRB	P28702	533 aa		13.47	□□□□□ -0.25
MS4A6A-215	ENST00000531914	PPP4R3B	Q5MIZ7	849 aa		13.47	□□□□□ -0.25
MS4A6A-215	ENST00000531914	NKX1-1	Q15270	411 aa	Predicted RBP	13.46	□□□□□ -0.25
MS4A6A-215	ENST00000531914	CABP1	Q9NZU7	370 aa		13.46	□□□□□ -0.25
MS4A6A-215	ENST00000531914	EVC2	Q86UK5	1308 aa		13.45	□□□□□ -0.26
MS4A6A-215	ENST00000531914	SLIT2	O94813	1529 aa		13.45	□□□□□ -0.26
MS4A6A-215	ENST00000531914	POTEE	Q6S8J3	1075 aa		13.45	□□□□□ -0.26
MS4A6A-215	ENST00000531914	ATRN	O75882	1429 aa		13.45	□□□□□ -0.26
MS4A6A-215	ENST00000531914	CLSPN	Q9HAW4	1339 aa		13.44	□□□□□ -0.26
MS4A6A-215	ENST00000531914	FAM83G	A6ND36	823 aa		13.44	□□□□□ -0.26
MS4A6A-215	ENST00000531914	RBM6	P78332	1123 aa	Known RBP	13.44	□□□□□ -0.26
MS4A6A-215	ENST00000531914	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.44	□□□□□ -0.26
MS4A6A-215	ENST00000531914	SBNO2	Q9Y2G9	1366 aa		13.44	□□□□□ -0.26
MS4A6A-215	ENST00000531914	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.43	□□□□□ -0.26
MS4A6A-215	ENST00000531914	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.43	□□□□□ -0.26
MS4A6A-215	ENST00000531914	TRPC5	Q9UL62	973 aa	Predicted RBP	13.43	□□□□□ -0.26
MS4A6A-215	ENST00000531914	SSH2	Q76I76	1423 aa		13.42	□□□□□ -0.26
MS4A6A-215	ENST00000531914	NUTM2G	Q5VZR2	741 aa		13.42	□□□□□ -0.26
MS4A6A-215	ENST00000531914	ADGRD1	Q6QNK2	874 aa		13.42	□□□□□ -0.26
MS4A6A-215	ENST00000531914	PLCH1	Q4KWH8	1693 aa		13.42	□□□□□ -0.26
MS4A6A-215	ENST00000531914	RGS12	O14924	1447 aa		13.41	□□□□□ -0.26
MS4A6A-215	ENST00000531914	HAP1	P54257	671 aa	Predicted RBP	13.41	□□□□□ -0.26
MS4A6A-215	ENST00000531914	UNC5CL	Q8IV45	518 aa		13.41	□□□□□ -0.26
MS4A6A-215	ENST00000531914	TESK2	Q96S53	571 aa		13.41	□□□□□ -0.26
MS4A6A-215	ENST00000531914	NWD2	Q9ULI1	1742 aa		13.41	□□□□□ -0.26
MS4A6A-215	ENST00000531914	AKAP12	Q02952	1782 aa		13.4	□□□□□ -0.26
MS4A6A-215	ENST00000531914	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.4	□□□□□ -0.26
MS4A6A-215	ENST00000531914	ST20-MTHFS	A0A0A6YYL1	179 aa		13.4	□□□□□ -0.26
MS4A6A-215	ENST00000531914	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
MS4A6A-215	ENST00000531914	TIMELESS	Q9UNS1	1208 aa		13.4	□□□□□ -0.26
MS4A6A-215	ENST00000531914	USP6	P35125	1406 aa		13.39	□□□□□ -0.27
MS4A6A-215	ENST00000531914	ABTB2	Q8N961	1025 aa		13.39	□□□□□ -0.27
MS4A6A-215	ENST00000531914	GJD4	Q96KN9	370 aa	Predicted RBP	13.39	□□□□□ -0.27
MS4A6A-215	ENST00000531914	GLI3	P10071	1580 aa		13.39	□□□□□ -0.27
MS4A6A-215	ENST00000531914	NRAP	Q86VF7	1730 aa		13.39	□□□□□ -0.27
MS4A6A-215	ENST00000531914	CPSF1	Q10570	1443 aa	Known RBP	13.39	□□□□□ -0.27
MS4A6A-215	ENST00000531914	COL14A1	Q05707	1796 aa	Known RBP	13.38	□□□□□ -0.27
MS4A6A-215	ENST00000531914	PPP1R15B	Q5SWA1	713 aa		13.38	□□□□□ -0.27
MS4A6A-215	ENST00000531914	CD163L1	Q9NR16	1453 aa		13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	BRD4	O60885	1362 aa	Predicted RBP	13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	ATAD2	Q6PL18	1390 aa		13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	PDE4A	P27815	886 aa		13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	PSEN2	P49810	448 aa		13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	CCER1	Q8TC90	406 aa	Predicted RBP	13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	PIK3C2A	O00443	1686 aa		13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	USP19	O94966	1318 aa		13.37	□□□□□ -0.27
MS4A6A-215	ENST00000531914	KIAA0232	Q92628	1395 aa		13.36	□□□□□ -0.27
MS4A6A-215	ENST00000531914	TK2	O00142	265 aa		13.36	□□□□□ -0.27
MS4A6A-215	ENST00000531914	VPS72	Q15906	364 aa		13.36	□□□□□ -0.27
MS4A6A-215	ENST00000531914	CRISPLD2	Q9H0B8	497 aa		13.36	□□□□□ -0.27
MS4A6A-215	ENST00000531914	BTG4	Q9NY30	223 aa		13.36	□□□□□ -0.27
MS4A6A-215	ENST00000531914	NRK	Q7Z2Y5	1582 aa		13.36	□□□□□ -0.27
MS4A6A-215	ENST00000531914	USP47	Q96K76	1375 aa		13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	ZC3H6	P61129	1189 aa	Known RBP	13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	CHRNA2	Q15822	529 aa		13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	OXER1	Q8TDS5	423 aa		13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	SLC12A5	Q9H2X9	1139 aa		13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	MON2	Q7Z3U7	1717 aa		13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	TTC21B	Q7Z4L5	1316 aa		13.35	□□□□□ -0.27
MS4A6A-215	ENST00000531914	EP400	Q96L91	3159 aa		13.34	□□□□□ -0.27
MS4A6A-215	ENST00000531914	NLRP13	Q86W25	1043 aa		13.34	□□□□□ -0.27
MS4A6A-215	ENST00000531914	PUS7	Q96PZ0	661 aa	Known RBP	13.34	□□□□□ -0.27
MS4A6A-215	ENST00000531914	KCNK17	Q96T54	332 aa		13.34	□□□□□ -0.27
MS4A6A-215	ENST00000531914	PRDM11	Q9NQV5	511 aa		13.34	□□□□□ -0.27
MS4A6A-215	ENST00000531914	HCST	Q9UBK5	93 aa		13.34	□□□□□ -0.27
MS4A6A-215	ENST00000531914	ONECUT3	O60422	494 aa	Predicted RBP	13.33	□□□□□ -0.28
MS4A6A-215	ENST00000531914	GC	P02774	474 aa		13.33	□□□□□ -0.28
MS4A6A-215	ENST00000531914	DMRTA1	Q5VZB9	504 aa		13.33	□□□□□ -0.28
MS4A6A-215	ENST00000531914	BRWD3	Q6RI45	1802 aa		13.33	□□□□□ -0.28
MS4A6A-215	ENST00000531914	KTN1	Q86UP2	1357 aa	Known RBP	13.32	□□□□□ -0.28
MS4A6A-215	ENST00000531914	ZNF454	Q8N9F8	522 aa		13.32	□□□□□ -0.28
MS4A6A-215	ENST00000531914	TMC1	Q8TDI8	760 aa		13.32	□□□□□ -0.28
MS4A6A-215	ENST00000531914	SLIT3	O75094	1523 aa		13.32	□□□□□ -0.28
MS4A6A-215	ENST00000531914	CPD	O75976	1380 aa		13.32	□□□□□ -0.28
MS4A6A-215	ENST00000531914	LMO7	Q8WWI1	1683 aa		13.31	□□□□□ -0.28
MS4A6A-215	ENST00000531914	CAMTA1	Q9Y6Y1	1673 aa		13.31	□□□□□ -0.28
MS4A6A-215	ENST00000531914	CCDC9	Q9Y3X0	531 aa	Known RBP	13.3	□□□□□ -0.28
MS4A6A-215	ENST00000531914	SPATA31A5	Q5VU36	1347 aa		13.3	□□□□□ -0.28
MS4A6A-215	ENST00000531914	SPATA31A7	Q8IWB4	1347 aa		13.3	□□□□□ -0.28
MS4A6A-215	ENST00000531914	TTC21A	Q8NDW8	1320 aa		13.3	□□□□□ -0.28
MS4A6A-215	ENST00000531914	COL18A1	P39060	1754 aa		13.3	□□□□□ -0.28
MS4A6A-215	ENST00000531914	SEPT12	Q8IYM1	358 aa		13.29	□□□□□ -0.28
MS4A6A-215	ENST00000531914		A0A1W2PP64	1363 aa		13.29	□□□□□ -0.28
MS4A6A-215	ENST00000531914	GTPBP6	O43824	516 aa	Predicted RBP	13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	SLC24A1	O60721	1099 aa		13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	NME9	Q86XW9	330 aa		13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	LARP6	Q9BRS8	491 aa	Known RBP	13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	RTN4	Q9NQC3	1192 aa	Known RBP	13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	USP54	Q70EL1	1684 aa		13.28	□□□□□ -0.28
MS4A6A-215	ENST00000531914	TMF1	P82094	1093 aa		13.27	□□□□□ -0.29
MS4A6A-215	ENST00000531914	FAM98C	Q17RN3	349 aa	Known RBP	13.27	□□□□□ -0.29
MS4A6A-215	ENST00000531914	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.27	□□□□□ -0.29
MS4A6A-215	ENST00000531914	DDX27	Q96GQ7	796 aa	Known RBP	13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms