RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 C3orf80F5H4A9 247 aa6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 PER1O15534 1290 aaPredicted RBP6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 MAPK1P28482 360 aa6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 SIX5Q8N196 739 aa6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 PHTF2Q8N3S3 785 aa6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 OGFOD1Q8N543 542 aa6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 GPKOWQ92917 476 aaPredicted RBP eCLIP6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 HLA-CQ95604 372 aa6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 CUEDC1Q9NWM3 386 aaPredicted RBP6.36□□□□□ -1.39
AC055878.1-201ENST00000531858 ANKRD62A6NC57 917 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 H3BRB1 525 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 WFS1O76024 890 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 MRPL58Q14197 206 aaKnown RBP6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 TSNAXIP1Q2TAA8 658 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 SPRYD7Q5W111 196 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 ZNF598Q86UK7 904 aaKnown RBP6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 DEPDC4Q8N2C3 294 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 PLPP7Q8NBV4 271 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 TUT1Q9H6E5 874 aaKnown RBP6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 DNAAF2Q9NVR5 837 aaKnown RBP6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 PPP1R1BQ9UD71 204 aaPredicted RBP6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 NOD1Q9Y239 953 aa6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 RBM19Q9Y4C8 960 aaKnown RBP6.35□□□□□ -1.39
AC055878.1-201ENST00000531858 SEC13P55735 322 aa6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 INSM1Q01101 510 aaPredicted RBP6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 FKBP4Q02790 459 aaKnown RBP eCLIP6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 FUT2Q10981 343 aa6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 OCLNQ16625 522 aa6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 HIRIP3Q9BW71 556 aaPredicted RBP6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 NLRP2Q9NX02 1062 aa6.34□□□□□ -1.39
AC055878.1-201ENST00000531858 RNF223E7ERA6 249 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 PTCD1O75127 700 aaKnown RBP6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 ZPR1O75312 459 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 ABL1P00519 1130 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 PTK2Q05397 1052 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 ARMC2Q8NEN0 867 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 BACH2Q9BYV9 841 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 AAASQ9NRG9 546 aa6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 METTL5Q9NRN9 209 aaKnown RBP6.33□□□□□ -1.4
AC055878.1-201ENST00000531858 ST8SIA5O15466 376 aa6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 SWT1Q5T5J6 900 aaKnown RBP6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 ZNF697Q5TEC3 545 aa6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 PDXDC2PQ6P474 469 aa6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 DPH6Q7L8W6 267 aa6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 COL26A1Q96A83 441 aa6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 TMA7Q9Y2S6 64 aaKnown RBP6.32□□□□□ -1.4
AC055878.1-201ENST00000531858 DKK1O94907 266 aa6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 F12P00748 615 aaPredicted RBP6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 CLDN10P78369 228 aa6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 ARHGAP4P98171 946 aa6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 CITED4Q96RK1 184 aa6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 RBCK1Q9BYM8 510 aa6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 SALL2Q9Y467 1007 aaPredicted RBP6.31□□□□□ -1.4
AC055878.1-201ENST00000531858 TNFRSF10AO00220 468 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 WIPF1O43516 503 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 HDLBPQ00341 1268 aaKnown RBP6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 ZNF211Q13398 564 aaPredicted RBP6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 ECM1Q16610 540 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 KMT5BQ4FZB7 885 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 ANKLE1Q8NAG6 615 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 GTF3C2Q8WUA4 911 aaPredicted RBP6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 EMID1Q96A84 441 aaPredicted RBP6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 PRR14Q9BWN1 585 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 TANGO6Q9C0B7 1094 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
AC055878.1-201ENST00000531858 GDF9O60383 454 aa6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 PRMT3O60678 531 aa6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 CFHP08603 1231 aa6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 NPR3P17342 541 aa6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 TAGLNQ01995 201 aaKnown RBP6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 GIMAP6Q6P9H5 292 aa6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 SYMPKQ92797 1274 aaKnown RBP6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 ZNF594Q96JF6 807 aaPredicted RBP6.29□□□□□ -1.4
AC055878.1-201ENST00000531858 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 M0R2N6 131 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 FAM13AO94988 1023 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 PTPRNQ16849 979 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 MORN1Q5T089 497 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 NBPF14Q5TI25 921 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 PCDHB3Q9Y5E6 796 aa6.28□□□□□ -1.4
AC055878.1-201ENST00000531858 FMNL1O95466 1100 aaPredicted RBP6.27□□□□□ -1.41
AC055878.1-201ENST00000531858 ATP2B1P20020 1258 aa6.27□□□□□ -1.41
AC055878.1-201ENST00000531858 FMR1Q06787 632 aaKnown RBP eCLIP6.27□□□□□ -1.41
AC055878.1-201ENST00000531858 GMLQ99445 158 aa6.27□□□□□ -1.41
AC055878.1-201ENST00000531858 TINF2Q9BSI4 451 aa6.27□□□□□ -1.41
AC055878.1-201ENST00000531858 PCDHB9Q9Y5E1 797 aa6.27□□□□□ -1.41
AC055878.1-201ENST00000531858 TLDC2A0PJX2 215 aa6.26□□□□□ -1.41
AC055878.1-201ENST00000531858 C11orf95C9JLR9 678 aaPredicted RBP6.26□□□□□ -1.41
AC055878.1-201ENST00000531858 PRPF40AO75400 957 aaKnown RBP6.26□□□□□ -1.41
AC055878.1-201ENST00000531858 WEE1P30291 646 aa6.26□□□□□ -1.41
AC055878.1-201ENST00000531858 GTF2IP78347 998 aa6.26□□□□□ -1.41
AC055878.1-201ENST00000531858 XPCQ01831 940 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms