RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TATP17735 454 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC4-210ENST00000531290 PPM1GO15355 546 aaPredicted RBP30.8■■■□□ 2.52
TRAPPC4-210ENST00000531290 ATF5Q9Y2D1 282 aaPredicted RBP30.8■■■□□ 2.52
TRAPPC4-210ENST00000531290 FAM208AQ9UK61 1670 aaKnown RBP30.8■■■□□ 2.52
TRAPPC4-210ENST00000531290 EMILIN1Q9Y6C2 1016 aa30.79■■■□□ 2.52
TRAPPC4-210ENST00000531290 MEGF6O75095 1541 aa30.78■■■□□ 2.52
TRAPPC4-210ENST00000531290 SLC27A3Q5K4L6 730 aa30.78■■■□□ 2.52
TRAPPC4-210ENST00000531290 LRRC4BQ9NT99 713 aa30.77■■■□□ 2.52
TRAPPC4-210ENST00000531290 DCAF8L1A6NGE4 600 aa30.76■■■□□ 2.51
TRAPPC4-210ENST00000531290 HSPA5P11021 654 aaKnown RBP30.76■■■□□ 2.51
TRAPPC4-210ENST00000531290 MTFR1LQ9H019 292 aa30.75■■■□□ 2.51
TRAPPC4-210ENST00000531290 PTGER2P43116 358 aa30.73■■■□□ 2.51
TRAPPC4-210ENST00000531290 ZNF827Q17R98 1081 aa30.71■■■□□ 2.51
TRAPPC4-210ENST00000531290 PCDH11XQ9BZA7 1347 aa30.7■■■□□ 2.5
TRAPPC4-210ENST00000531290 PCDH11YQ9BZA8 1340 aa30.7■■■□□ 2.5
TRAPPC4-210ENST00000531290 WASHC2AQ641Q2 1341 aa30.69■■■□□ 2.5
TRAPPC4-210ENST00000531290 AKT1S1Q96B36 256 aa30.68■■■□□ 2.5
TRAPPC4-210ENST00000531290 CASZ1Q86V15 1759 aa30.67■■■□□ 2.5
TRAPPC4-210ENST00000531290 KCNQ4P56696 695 aa30.67■■■□□ 2.5
TRAPPC4-210ENST00000531290 PANK3Q9H999 370 aa30.67■■■□□ 2.5
TRAPPC4-210ENST00000531290 POLKQ9UBT6 870 aa30.67■■■□□ 2.5
TRAPPC4-210ENST00000531290 BTAF1O14981 1849 aa30.67■■■□□ 2.5
TRAPPC4-210ENST00000531290 MYOM1P52179 1685 aa30.66■■■□□ 2.5
TRAPPC4-210ENST00000531290 TNNT2P45379 298 aaPredicted RBP30.66■■■□□ 2.5
TRAPPC4-210ENST00000531290 KIF20BQ96Q89 1820 aa30.66■■■□□ 2.5
TRAPPC4-210ENST00000531290 NSD2O96028 1365 aa30.66■■■□□ 2.5
TRAPPC4-210ENST00000531290 TFCP2L1Q9NZI6 479 aa30.65■■■□□ 2.5
TRAPPC4-210ENST00000531290 CCNL1Q9UK58 526 aaPredicted RBP30.65■■■□□ 2.5
TRAPPC4-210ENST00000531290 CYP27B1O15528 508 aa30.62■■■□□ 2.49
TRAPPC4-210ENST00000531290 EYA1Q99502 592 aa30.62■■■□□ 2.49
TRAPPC4-210ENST00000531290 SPG7Q9UQ90 795 aa30.62■■■□□ 2.49
TRAPPC4-210ENST00000531290 RGPD2P0DJD1 1756 aa30.61■■■□□ 2.49
TRAPPC4-210ENST00000531290 KAT6BQ8WYB5 2073 aa30.61■■■□□ 2.49
TRAPPC4-210ENST00000531290 SLC16A10Q8TF71 515 aa30.61■■■□□ 2.49
TRAPPC4-210ENST00000531290 SGIP1Q9BQI5 828 aa30.61■■■□□ 2.49
TRAPPC4-210ENST00000531290 MPRIPQ6WCQ1 1025 aa30.6■■■□□ 2.49
TRAPPC4-210ENST00000531290 ARXQ96QS3 562 aa30.6■■■□□ 2.49
TRAPPC4-210ENST00000531290 FHDC1Q9C0D6 1143 aaPredicted RBP30.6■■■□□ 2.49
TRAPPC4-210ENST00000531290 PAPPAQ13219 1627 aa30.59■■■□□ 2.49
TRAPPC4-210ENST00000531290 SYT17Q9BSW7 474 aa30.59■■■□□ 2.49
TRAPPC4-210ENST00000531290 HMGB2P26583 209 aaKnown RBP30.57■■■□□ 2.48
TRAPPC4-210ENST00000531290 PNPLA7Q6ZV29 1317 aa30.56■■■□□ 2.48
TRAPPC4-210ENST00000531290 YY1P25490 414 aa30.56■■■□□ 2.48
TRAPPC4-210ENST00000531290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.56■■■□□ 2.48
TRAPPC4-210ENST00000531290 EIF4A2Q14240 407 aaKnown RBP30.55■■■□□ 2.48
TRAPPC4-210ENST00000531290 POLD1P28340 1107 aa30.54■■■□□ 2.48
TRAPPC4-210ENST00000531290 DOT1LQ8TEK3 1739 aa30.53■■■□□ 2.48
TRAPPC4-210ENST00000531290 NKX1-1Q15270 411 aaPredicted RBP30.53■■■□□ 2.48
TRAPPC4-210ENST00000531290 MORC1Q86VD1 984 aa30.53■■■□□ 2.48
TRAPPC4-210ENST00000531290 SMARCC1Q92922 1105 aaPredicted RBP30.53■■■□□ 2.48
TRAPPC4-210ENST00000531290 NCAPD2Q15021 1401 aa30.53■■■□□ 2.48
TRAPPC4-210ENST00000531290 SHANK3Q9BYB0 1731 aa30.53■■■□□ 2.48
TRAPPC4-210ENST00000531290 MSH5O43196 834 aa30.52■■■□□ 2.48
TRAPPC4-210ENST00000531290 KNSTRNQ9Y448 316 aa30.52■■■□□ 2.48
TRAPPC4-210ENST00000531290 PALLDQ8WX93 1383 aa30.51■■■□□ 2.47
TRAPPC4-210ENST00000531290 IFNL2Q8IZJ0 200 aa30.49■■■□□ 2.47
TRAPPC4-210ENST00000531290 PIGBQ92521 554 aa30.49■■■□□ 2.47
TRAPPC4-210ENST00000531290 PHKG2P15735 406 aa30.46■■■□□ 2.47
TRAPPC4-210ENST00000531290 COL23A1Q86Y22 540 aaPredicted RBP30.45■■■□□ 2.47
TRAPPC4-210ENST00000531290 KLHL34Q8N239 644 aa30.45■■■□□ 2.47
TRAPPC4-210ENST00000531290 TMOD3Q9NYL9 352 aa30.45■■■□□ 2.47
TRAPPC4-210ENST00000531290 FLAD1Q8NFF5 587 aa30.43■■■□□ 2.46
TRAPPC4-210ENST00000531290 IGSF1Q8N6C5 1336 aa30.43■■■□□ 2.46
TRAPPC4-210ENST00000531290 MAP3K5Q99683 1374 aa30.42■■■□□ 2.46
TRAPPC4-210ENST00000531290 ANKRD26Q9UPS8 1709 aa30.42■■■□□ 2.46
TRAPPC4-210ENST00000531290 LY75O60449 1722 aa30.41■■■□□ 2.46
TRAPPC4-210ENST00000531290 PLEKHO1Q53GL0 409 aaPredicted RBP30.4■■■□□ 2.46
TRAPPC4-210ENST00000531290 AK7Q96M32 723 aa30.4■■■□□ 2.46
TRAPPC4-210ENST00000531290 KIF7Q2M1P5 1343 aa30.39■■■□□ 2.46
TRAPPC4-210ENST00000531290 MAP2P11137 1827 aaKnown RBP30.38■■■□□ 2.45
TRAPPC4-210ENST00000531290 PLEKHG2Q9H7P9 1386 aa30.38■■■□□ 2.45
TRAPPC4-210ENST00000531290 LOC102724428A0A0B4J2F2 783 aa30.37■■■□□ 2.45
TRAPPC4-210ENST00000531290 HSP90AB1P08238 724 aaKnown RBP30.37■■■□□ 2.45
TRAPPC4-210ENST00000531290 SIK1P57059 783 aa30.37■■■□□ 2.45
TRAPPC4-210ENST00000531290 ASAP1Q9ULH1 1129 aa30.37■■■□□ 2.45
TRAPPC4-210ENST00000531290 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
TRAPPC4-210ENST00000531290 AMOTQ4VCS5 1084 aa30.36■■■□□ 2.45
TRAPPC4-210ENST00000531290 GPR162Q16538 588 aa30.35■■■□□ 2.45
TRAPPC4-210ENST00000531290 AMER1Q5JTC6 1135 aaPredicted RBP30.35■■■□□ 2.45
TRAPPC4-210ENST00000531290 MSL1Q68DK7 614 aa30.35■■■□□ 2.45
TRAPPC4-210ENST00000531290 ERVV-2B6SEH9 535 aa30.33■■■□□ 2.45
TRAPPC4-210ENST00000531290 DCAF5Q96JK2 942 aa30.33■■■□□ 2.45
TRAPPC4-210ENST00000531290 ZNF530Q6P9A1 599 aaPredicted RBP30.32■■■□□ 2.44
TRAPPC4-210ENST00000531290 ATG3Q9NT62 314 aa30.32■■■□□ 2.44
TRAPPC4-210ENST00000531290 QSER1Q2KHR3 1735 aa30.32■■■□□ 2.44
TRAPPC4-210ENST00000531290 ATP6V1AP38606 617 aa30.31■■■□□ 2.44
TRAPPC4-210ENST00000531290 SULT6B1Q6IMI4 303 aa30.31■■■□□ 2.44
TRAPPC4-210ENST00000531290 AEBP1Q8IUX7 1158 aa30.31■■■□□ 2.44
TRAPPC4-210ENST00000531290 PHF14O94880 888 aa30.3■■■□□ 2.44
TRAPPC4-210ENST00000531290 C1orf141Q5JVX7 400 aa30.29■■■□□ 2.44
TRAPPC4-210ENST00000531290 PELP1Q8IZL8 1130 aaKnown RBP30.29■■■□□ 2.44
TRAPPC4-210ENST00000531290 LINC00116Q8NCU8 138 aa30.29■■■□□ 2.44
TRAPPC4-210ENST00000531290 TOGARAM1Q9Y4F4 1720 aa30.29■■■□□ 2.44
TRAPPC4-210ENST00000531290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.28■■■□□ 2.44
TRAPPC4-210ENST00000531290 IL13P35225 146 aa30.28■■■□□ 2.44
TRAPPC4-210ENST00000531290 MTHFSP49914 203 aa30.27■■■□□ 2.44
TRAPPC4-210ENST00000531290 CABP4P57796 275 aa30.27■■■□□ 2.44
TRAPPC4-210ENST00000531290 ITPK1Q13572 414 aa30.27■■■□□ 2.44
TRAPPC4-210ENST00000531290 NLGN2Q8NFZ4 835 aa30.27■■■□□ 2.44
TRAPPC4-210ENST00000531290 SSFA2P28290 1259 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms