RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 LRRC4BQ9NT99 713 aa7.64□□□□□ -1.19
VPS11-204ENST00000530809 ATP10DQ9P241 1426 aa7.63□□□□□ -1.19
VPS11-204ENST00000530809 KTN1Q86UP2 1357 aaKnown RBP7.63□□□□□ -1.19
VPS11-204ENST00000530809 PNPLA7Q6ZV29 1317 aa7.63□□□□□ -1.19
VPS11-204ENST00000530809 HSPA6P17066 643 aa7.63□□□□□ -1.19
VPS11-204ENST00000530809 NBPF1Q3BBV0 1214 aa7.63□□□□□ -1.19
VPS11-204ENST00000530809 TFCP2L1Q9NZI6 479 aa7.63□□□□□ -1.19
VPS11-204ENST00000530809 USP31Q70CQ4 1352 aa7.62□□□□□ -1.19
VPS11-204ENST00000530809 ZNF316A6NFI3 1004 aaPredicted RBP7.62□□□□□ -1.19
VPS11-204ENST00000530809 SOX12O15370 315 aa7.62□□□□□ -1.19
VPS11-204ENST00000530809 NLGN2Q8NFZ4 835 aa7.62□□□□□ -1.19
VPS11-204ENST00000530809 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
VPS11-204ENST00000530809 NLRP2Q9NX02 1062 aa7.62□□□□□ -1.19
VPS11-204ENST00000530809 RGPD2P0DJD1 1756 aa7.61□□□□□ -1.19
VPS11-204ENST00000530809 ADCY9O60503 1353 aa7.61□□□□□ -1.19
VPS11-204ENST00000530809 ANKRD36BQ8N2N9 1353 aa7.61□□□□□ -1.19
VPS11-204ENST00000530809 YBX3P16989 372 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS11-204ENST00000530809 UTRNP46939 3433 aa7.6□□□□□ -1.19
VPS11-204ENST00000530809 ANKRD24Q8TF21 1146 aa7.6□□□□□ -1.19
VPS11-204ENST00000530809 UBR3Q6ZT12 1888 aa7.6□□□□□ -1.19
VPS11-204ENST00000530809 CICQ96RK0 1608 aaPredicted RBP7.6□□□□□ -1.19
VPS11-204ENST00000530809 ITGB4P16144 1822 aa7.59□□□□□ -1.19
VPS11-204ENST00000530809 WDR90Q96KV7 1748 aa7.59□□□□□ -1.19
VPS11-204ENST00000530809 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
VPS11-204ENST00000530809 CD2APQ9Y5K6 639 aa7.59□□□□□ -1.19
VPS11-204ENST00000530809 KIF13BQ9NQT8 1826 aa7.59□□□□□ -1.19
VPS11-204ENST00000530809 USP47Q96K76 1375 aa7.59□□□□□ -1.2
VPS11-204ENST00000530809 SBNO2Q9Y2G9 1366 aa7.59□□□□□ -1.2
VPS11-204ENST00000530809 C4BP0C0L5 1744 aa7.58□□□□□ -1.2
VPS11-204ENST00000530809 SYTL4Q96C24 671 aaPredicted RBP7.58□□□□□ -1.2
VPS11-204ENST00000530809 EDC4Q6P2E9 1401 aaKnown RBP7.58□□□□□ -1.2
VPS11-204ENST00000530809 NSD3Q9BZ95 1437 aa7.58□□□□□ -1.2
VPS11-204ENST00000530809 NSD2O96028 1365 aa7.58□□□□□ -1.2
VPS11-204ENST00000530809 PRIM1P49642 420 aaKnown RBP7.57□□□□□ -1.2
VPS11-204ENST00000530809 APLP1P51693 650 aa7.57□□□□□ -1.2
VPS11-204ENST00000530809 DIEXFQ68CQ4 756 aaKnown RBP7.57□□□□□ -1.2
VPS11-204ENST00000530809 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
VPS11-204ENST00000530809 CCNL1Q9UK58 526 aaPredicted RBP7.57□□□□□ -1.2
VPS11-204ENST00000530809 TOGARAM1Q9Y4F4 1720 aa7.57□□□□□ -1.2
VPS11-204ENST00000530809 CD163L1Q9NR16 1453 aa7.56□□□□□ -1.2
VPS11-204ENST00000530809 HDGFL2Q7Z4V5 671 aaPredicted RBP7.56□□□□□ -1.2
VPS11-204ENST00000530809 COL23A1Q86Y22 540 aaPredicted RBP7.56□□□□□ -1.2
VPS11-204ENST00000530809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.56□□□□□ -1.2
VPS11-204ENST00000530809 ROCK2O75116 1388 aaKnown RBP7.56□□□□□ -1.2
VPS11-204ENST00000530809 BRCA1P38398 1863 aaKnown RBP7.55□□□□□ -1.2
VPS11-204ENST00000530809 CGNL1Q0VF96 1302 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 ARFGEF1Q9Y6D6 1849 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 KCNQ4P56696 695 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 NME9Q86XW9 330 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 ZCRB1Q8TBF4 217 aaKnown RBP7.55□□□□□ -1.2
VPS11-204ENST00000530809 ZNF526Q8TF50 670 aaPredicted RBP7.55□□□□□ -1.2
VPS11-204ENST00000530809 IP6K1Q92551 441 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 PKD1L3Q7Z443 1732 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 KIAA1551Q9HCM1 1747 aa7.55□□□□□ -1.2
VPS11-204ENST00000530809 CEP350Q5VT06 3117 aa7.54□□□□□ -1.2
VPS11-204ENST00000530809 N4BP2Q86UW6 1770 aaPredicted RBP7.54□□□□□ -1.2
VPS11-204ENST00000530809 MEGF6O75095 1541 aa7.54□□□□□ -1.2
VPS11-204ENST00000530809 MSL1Q68DK7 614 aa7.54□□□□□ -1.2
VPS11-204ENST00000530809 TERF2IPQ9NYB0 399 aa7.54□□□□□ -1.2
VPS11-204ENST00000530809 RTL1A6NKG5 1358 aa7.54□□□□□ -1.2
VPS11-204ENST00000530809 MAP2P11137 1827 aaKnown RBP7.54□□□□□ -1.2
VPS11-204ENST00000530809 TNRC6CQ9HCJ0 1690 aaKnown RBP7.54□□□□□ -1.2
VPS11-204ENST00000530809 IGSF1Q8N6C5 1336 aa7.53□□□□□ -1.2
VPS11-204ENST00000530809 SMG6Q86US8 1419 aaKnown RBP7.53□□□□□ -1.2
VPS11-204ENST00000530809 KIF3CO14782 793 aa7.53□□□□□ -1.2
VPS11-204ENST00000530809 TOMM70O94826 608 aa7.53□□□□□ -1.2
VPS11-204ENST00000530809 TONSLQ96HA7 1378 aa7.53□□□□□ -1.2
VPS11-204ENST00000530809 KIF20BQ96Q89 1820 aa7.52□□□□□ -1.2
VPS11-204ENST00000530809 ZNF831Q5JPB2 1677 aa7.52□□□□□ -1.21
VPS11-204ENST00000530809 A0A1W2PP64 1363 aa7.52□□□□□ -1.21
VPS11-204ENST00000530809 PALLDQ8WX93 1383 aa7.52□□□□□ -1.21
VPS11-204ENST00000530809 PUS7Q96PZ0 661 aaKnown RBP7.52□□□□□ -1.21
VPS11-204ENST00000530809 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.21
VPS11-204ENST00000530809 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.21
VPS11-204ENST00000530809 HOXC9P31274 260 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 AMPHP49418 695 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
VPS11-204ENST00000530809 L3MBTL2Q969R5 705 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 LTV1Q96GA3 475 aaPredicted RBP7.51□□□□□ -1.21
VPS11-204ENST00000530809 COG3Q96JB2 828 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 AK7Q96M32 723 aa7.51□□□□□ -1.21
VPS11-204ENST00000530809 GOLGB1Q14789 3259 aaKnown RBP7.51□□□□□ -1.21
VPS11-204ENST00000530809 PLEKHG2Q9H7P9 1386 aa7.5□□□□□ -1.21
VPS11-204ENST00000530809 SBF1O95248 1867 aa7.5□□□□□ -1.21
VPS11-204ENST00000530809 SSFA2P28290 1259 aa7.5□□□□□ -1.21
VPS11-204ENST00000530809 FKBP8Q14318 412 aa7.5□□□□□ -1.21
VPS11-204ENST00000530809 DNAJC5GQ8N7S2 189 aa7.5□□□□□ -1.21
VPS11-204ENST00000530809 MAP3K19Q56UN5 1328 aa7.5□□□□□ -1.21
VPS11-204ENST00000530809 TATP17735 454 aaPredicted RBP7.49□□□□□ -1.21
VPS11-204ENST00000530809 RBM46Q8TBY0 533 aaKnown RBP7.49□□□□□ -1.21
VPS11-204ENST00000530809 SLC12A5Q9H2X9 1139 aa7.49□□□□□ -1.21
VPS11-204ENST00000530809 C4AP0C0L4 1744 aa7.49□□□□□ -1.21
VPS11-204ENST00000530809 COL5A3P25940 1745 aaPredicted RBP7.49□□□□□ -1.21
VPS11-204ENST00000530809 ANKRD26Q9UPS8 1709 aa7.49□□□□□ -1.21
VPS11-204ENST00000530809 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
VPS11-204ENST00000530809 KIF24Q5T7B8 1368 aa7.48□□□□□ -1.21
VPS11-204ENST00000530809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.48□□□□□ -1.21
VPS11-204ENST00000530809 SLC24A1O60721 1099 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms