RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
CCS-205ENST00000530384 NPC1L1Q9UHC9 1359 aa23.25■■□□□ 1.31
CCS-205ENST00000530384 PLSCR1O15162 318 aa23.24■■□□□ 1.31
CCS-205ENST00000530384 RREB1Q92766 1687 aa23.24■■□□□ 1.31
CCS-205ENST00000530384 SHANK3Q9BYB0 1731 aa23.24■■□□□ 1.31
CCS-205ENST00000530384 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
CCS-205ENST00000530384 EYA1Q99502 592 aa23.23■■□□□ 1.31
CCS-205ENST00000530384 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
CCS-205ENST00000530384 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
CCS-205ENST00000530384 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
CCS-205ENST00000530384 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
CCS-205ENST00000530384 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
CCS-205ENST00000530384 KCNQ2O43526 872 aa23.19■■□□□ 1.3
CCS-205ENST00000530384 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
CCS-205ENST00000530384 PKD1L3Q7Z443 1732 aa23.18■■□□□ 1.3
CCS-205ENST00000530384 IGSF1Q8N6C5 1336 aa23.16■■□□□ 1.3
CCS-205ENST00000530384 BTAF1O14981 1849 aa23.16■■□□□ 1.3
CCS-205ENST00000530384 DOT1LQ8TEK3 1739 aa23.16■■□□□ 1.3
CCS-205ENST00000530384 PLEKHG2Q9H7P9 1386 aa23.15■■□□□ 1.3
CCS-205ENST00000530384 NBPF14Q5TI25 921 aa23.15■■□□□ 1.3
CCS-205ENST00000530384 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
CCS-205ENST00000530384 MTHFSP49914 203 aa23.14■■□□□ 1.29
CCS-205ENST00000530384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.29
CCS-205ENST00000530384 PSDA5PKW4 1024 aaPredicted RBP23.12■■□□□ 1.29
CCS-205ENST00000530384 CYP27B1O15528 508 aa23.11■■□□□ 1.29
CCS-205ENST00000530384 PRIM1P49642 420 aaKnown RBP23.11■■□□□ 1.29
CCS-205ENST00000530384 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
CCS-205ENST00000530384 R3HDM1Q15032 1099 aaKnown RBP23.11■■□□□ 1.29
CCS-205ENST00000530384 SYTL4Q96C24 671 aaPredicted RBP23.11■■□□□ 1.29
CCS-205ENST00000530384 IL13P35225 146 aa23.1■■□□□ 1.29
CCS-205ENST00000530384 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
CCS-205ENST00000530384 TXNRD1Q16881 649 aa23.1■■□□□ 1.29
CCS-205ENST00000530384 PROM2Q8N271 834 aa23.09■■□□□ 1.29
CCS-205ENST00000530384 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
CCS-205ENST00000530384 NKX1-1Q15270 411 aaPredicted RBP23.06■■□□□ 1.28
CCS-205ENST00000530384 IFNL2Q8IZJ0 200 aa23.06■■□□□ 1.28
CCS-205ENST00000530384 KDRP35968 1356 aa23.05■■□□□ 1.28
CCS-205ENST00000530384 DIAPH1O60610 1272 aaKnown RBP23.05■■□□□ 1.28
CCS-205ENST00000530384 PLEKHO1Q53GL0 409 aaPredicted RBP23.05■■□□□ 1.28
CCS-205ENST00000530384 SULT6B1Q6IMI4 303 aa23.05■■□□□ 1.28
CCS-205ENST00000530384 AMOTQ4VCS5 1084 aa23.04■■□□□ 1.28
CCS-205ENST00000530384 AEBP1Q8IUX7 1158 aa23.04■■□□□ 1.28
CCS-205ENST00000530384 TOGARAM1Q9Y4F4 1720 aa23.03■■□□□ 1.28
CCS-205ENST00000530384 PHKG2P15735 406 aa23.03■■□□□ 1.28
CCS-205ENST00000530384 ITGB4P16144 1822 aa23.03■■□□□ 1.28
CCS-205ENST00000530384 SLC27A3Q5K4L6 730 aa23.02■■□□□ 1.28
CCS-205ENST00000530384 ANO8Q9HCE9 1232 aaPredicted RBP23.01■■□□□ 1.27
CCS-205ENST00000530384 LY75O60449 1722 aa23.01■■□□□ 1.27
CCS-205ENST00000530384 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
CCS-205ENST00000530384 CFAP53Q96M91 514 aa23■■□□□ 1.27
CCS-205ENST00000530384 STK32BQ9NY57 414 aa23■■□□□ 1.27
CCS-205ENST00000530384 LRP5O75197 1615 aa23■■□□□ 1.27
CCS-205ENST00000530384 HSP90AB1P08238 724 aaKnown RBP22.99■■□□□ 1.27
CCS-205ENST00000530384 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
CCS-205ENST00000530384 PAPPAQ13219 1627 aa22.98■■□□□ 1.27
CCS-205ENST00000530384 PPP2R1AP30153 589 aa22.98■■□□□ 1.27
CCS-205ENST00000530384 ZNF530Q6P9A1 599 aaPredicted RBP22.98■■□□□ 1.27
CCS-205ENST00000530384 SLC15A2Q16348 729 aa22.97■■□□□ 1.27
CCS-205ENST00000530384 LRRC4BQ9NT99 713 aa22.97■■□□□ 1.27
CCS-205ENST00000530384 HMOX1P09601 288 aa22.96■■□□□ 1.27
CCS-205ENST00000530384 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
CCS-205ENST00000530384 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
CCS-205ENST00000530384 SMARCC1Q92922 1105 aaPredicted RBP22.95■■□□□ 1.26
CCS-205ENST00000530384 TMOD3Q9NYL9 352 aa22.95■■□□□ 1.26
CCS-205ENST00000530384 PALLDQ8WX93 1383 aa22.94■■□□□ 1.26
CCS-205ENST00000530384 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
CCS-205ENST00000530384 HMGB2P26583 209 aaKnown RBP22.94■■□□□ 1.26
CCS-205ENST00000530384 PIGBQ92521 554 aa22.94■■□□□ 1.26
CCS-205ENST00000530384 CCNL1Q9UK58 526 aaPredicted RBP22.94■■□□□ 1.26
CCS-205ENST00000530384 ERVV-2B6SEH9 535 aa22.93■■□□□ 1.26
CCS-205ENST00000530384 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
CCS-205ENST00000530384 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
CCS-205ENST00000530384 CASZ1Q86V15 1759 aa22.91■■□□□ 1.26
CCS-205ENST00000530384 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
CCS-205ENST00000530384 KDM6AO15550 1401 aaPredicted RBP22.9■■□□□ 1.26
CCS-205ENST00000530384 KCNQ4P56696 695 aa22.89■■□□□ 1.25
CCS-205ENST00000530384 ZNF827Q17R98 1081 aa22.89■■□□□ 1.25
CCS-205ENST00000530384 AKT1S1Q96B36 256 aa22.89■■□□□ 1.25
CCS-205ENST00000530384 SPON1Q9HCB6 807 aa22.88■■□□□ 1.25
CCS-205ENST00000530384 QSER1Q2KHR3 1735 aa22.88■■□□□ 1.25
CCS-205ENST00000530384 SCN11AQ9UI33 1791 aa22.87■■□□□ 1.25
CCS-205ENST00000530384 CABP4P57796 275 aa22.87■■□□□ 1.25
CCS-205ENST00000530384 RALBP1Q15311 655 aa22.87■■□□□ 1.25
CCS-205ENST00000530384 C5P01031 1676 aa22.87■■□□□ 1.25
CCS-205ENST00000530384 TAF1LQ8IZX4 1826 aa22.87■■□□□ 1.25
CCS-205ENST00000530384 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
CCS-205ENST00000530384 ASAP1Q9ULH1 1129 aa22.85■■□□□ 1.25
CCS-205ENST00000530384 PDGFDQ9GZP0 370 aaPredicted RBP22.84■■□□□ 1.25
CCS-205ENST00000530384 TFCP2L1Q9NZI6 479 aa22.84■■□□□ 1.25
CCS-205ENST00000530384 VIRMAQ69YN4 1812 aaKnown RBP22.84■■□□□ 1.25
CCS-205ENST00000530384 LOC102724428A0A0B4J2F2 783 aa22.83■■□□□ 1.25
CCS-205ENST00000530384 U2AF1L5P0DN76 240 aaPredicted RBP22.83■■□□□ 1.25
CCS-205ENST00000530384 SIK1P57059 783 aa22.83■■□□□ 1.25
CCS-205ENST00000530384 U2AF1Q01081 240 aaKnown RBP eCLIP22.83■■□□□ 1.25
CCS-205ENST00000530384 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
CCS-205ENST00000530384 ATG3Q9NT62 314 aa22.83■■□□□ 1.25
CCS-205ENST00000530384 TUBGCP6Q96RT7 1819 aa22.82■■□□□ 1.24
CCS-205ENST00000530384 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
CCS-205ENST00000530384 ZBTB7AO95365 584 aa22.81■■□□□ 1.24
CCS-205ENST00000530384 PRKAR2BP31323 418 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms