RNA–Protein interactions for RNA: ENST00000529950.1

MS4A4A-204, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 5

Gene MS4A4A, Length 658 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-204ENST00000529950 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
MS4A4A-204ENST00000529950 NUP188Q5SRE5 1749 aa17.57■□□□□ 0.4
MS4A4A-204ENST00000529950 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
MS4A4A-204ENST00000529950 NHSQ6T4R5 1651 aa17.56■□□□□ 0.4
MS4A4A-204ENST00000529950 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
MS4A4A-204ENST00000529950 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
MS4A4A-204ENST00000529950 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
MS4A4A-204ENST00000529950 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
MS4A4A-204ENST00000529950 PROM2Q8N271 834 aa17.55■□□□□ 0.4
MS4A4A-204ENST00000529950 EYA1Q99502 592 aa17.54■□□□□ 0.4
MS4A4A-204ENST00000529950 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
MS4A4A-204ENST00000529950 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
MS4A4A-204ENST00000529950 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
MS4A4A-204ENST00000529950 EIF4A2Q14240 407 aaKnown RBP17.53■□□□□ 0.4
MS4A4A-204ENST00000529950 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
MS4A4A-204ENST00000529950 STK32BQ9NY57 414 aa17.52■□□□□ 0.4
MS4A4A-204ENST00000529950 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
MS4A4A-204ENST00000529950 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
MS4A4A-204ENST00000529950 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
MS4A4A-204ENST00000529950 LRP5O75197 1615 aa17.5■□□□□ 0.39
MS4A4A-204ENST00000529950 NCAPD2Q15021 1401 aa17.49■□□□□ 0.39
MS4A4A-204ENST00000529950 BTAF1O14981 1849 aa17.49■□□□□ 0.39
MS4A4A-204ENST00000529950 SHANK3Q9BYB0 1731 aa17.48■□□□□ 0.39
MS4A4A-204ENST00000529950 CYP27B1O15528 508 aa17.48■□□□□ 0.39
MS4A4A-204ENST00000529950 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
MS4A4A-204ENST00000529950 SLC15A2Q16348 729 aa17.48■□□□□ 0.39
MS4A4A-204ENST00000529950 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
MS4A4A-204ENST00000529950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.39
MS4A4A-204ENST00000529950 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
MS4A4A-204ENST00000529950 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
MS4A4A-204ENST00000529950 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
MS4A4A-204ENST00000529950 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.38
MS4A4A-204ENST00000529950 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
MS4A4A-204ENST00000529950 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
MS4A4A-204ENST00000529950 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
MS4A4A-204ENST00000529950 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
MS4A4A-204ENST00000529950 MTHFSP49914 203 aa17.43■□□□□ 0.38
MS4A4A-204ENST00000529950 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
MS4A4A-204ENST00000529950 PKD1L3Q7Z443 1732 aa17.42■□□□□ 0.38
MS4A4A-204ENST00000529950 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
MS4A4A-204ENST00000529950 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
MS4A4A-204ENST00000529950 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
MS4A4A-204ENST00000529950 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
MS4A4A-204ENST00000529950 PHKG2P15735 406 aa17.41■□□□□ 0.38
MS4A4A-204ENST00000529950 IL13P35225 146 aa17.41■□□□□ 0.38
MS4A4A-204ENST00000529950 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
MS4A4A-204ENST00000529950 ZBTB7AO95365 584 aa17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 KCNQ4P56696 695 aa17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 ZNF827Q17R98 1081 aa17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 PDGFDQ9GZP0 370 aaPredicted RBP17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 SRCAPQ6ZRS2 3230 aa17.4■□□□□ 0.38
MS4A4A-204ENST00000529950 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
MS4A4A-204ENST00000529950 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
MS4A4A-204ENST00000529950 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
MS4A4A-204ENST00000529950 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
MS4A4A-204ENST00000529950 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
MS4A4A-204ENST00000529950 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
MS4A4A-204ENST00000529950 TMOD3Q9NYL9 352 aa17.38■□□□□ 0.37
MS4A4A-204ENST00000529950 PALLDQ8WX93 1383 aa17.38■□□□□ 0.37
MS4A4A-204ENST00000529950 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
MS4A4A-204ENST00000529950 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
MS4A4A-204ENST00000529950 PIGBQ92521 554 aa17.37■□□□□ 0.37
MS4A4A-204ENST00000529950 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
MS4A4A-204ENST00000529950 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
MS4A4A-204ENST00000529950 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
MS4A4A-204ENST00000529950 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
MS4A4A-204ENST00000529950 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
MS4A4A-204ENST00000529950 LY75O60449 1722 aa17.35■□□□□ 0.37
MS4A4A-204ENST00000529950 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
MS4A4A-204ENST00000529950 KDRP35968 1356 aa17.34■□□□□ 0.37
MS4A4A-204ENST00000529950 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
MS4A4A-204ENST00000529950 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
MS4A4A-204ENST00000529950 HMOX1P09601 288 aa17.33■□□□□ 0.36
MS4A4A-204ENST00000529950 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
MS4A4A-204ENST00000529950 ITGB4P16144 1822 aa17.32■□□□□ 0.36
MS4A4A-204ENST00000529950 PNPLA7Q6ZV29 1317 aa17.31■□□□□ 0.36
MS4A4A-204ENST00000529950 MSH5O43196 834 aa17.31■□□□□ 0.36
MS4A4A-204ENST00000529950 PTGER2P43116 358 aa17.31■□□□□ 0.36
MS4A4A-204ENST00000529950 CABP4P57796 275 aa17.31■□□□□ 0.36
MS4A4A-204ENST00000529950 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
MS4A4A-204ENST00000529950 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
MS4A4A-204ENST00000529950 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
MS4A4A-204ENST00000529950 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
MS4A4A-204ENST00000529950 SIK1P57059 783 aa17.3■□□□□ 0.36
MS4A4A-204ENST00000529950 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
MS4A4A-204ENST00000529950 ATP6V1AP38606 617 aa17.28■□□□□ 0.36
MS4A4A-204ENST00000529950 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
MS4A4A-204ENST00000529950 AK7Q96M32 723 aa17.28■□□□□ 0.36
MS4A4A-204ENST00000529950 KDM6AO15550 1401 aaPredicted RBP17.28■□□□□ 0.36
MS4A4A-204ENST00000529950 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
MS4A4A-204ENST00000529950 POLD1P28340 1107 aa17.27■□□□□ 0.36
MS4A4A-204ENST00000529950 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
MS4A4A-204ENST00000529950 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 ARXQ96QS3 562 aa17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
MS4A4A-204ENST00000529950 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms