RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
PACS1-210ENST00000529795 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
PACS1-210ENST00000529795 R3HDM1Q15032 1099 aaKnown RBP17.32■□□□□ 0.36
PACS1-210ENST00000529795 ACSBG1Q96GR2 724 aa17.32■□□□□ 0.36
PACS1-210ENST00000529795 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
PACS1-210ENST00000529795 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
PACS1-210ENST00000529795 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
PACS1-210ENST00000529795 USHBP1Q8N6Y0 703 aa17.31■□□□□ 0.36
PACS1-210ENST00000529795 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
PACS1-210ENST00000529795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.3■□□□□ 0.36
PACS1-210ENST00000529795 MEGF6O75095 1541 aa17.3■□□□□ 0.36
PACS1-210ENST00000529795 KCNQ2O43526 872 aa17.29■□□□□ 0.36
PACS1-210ENST00000529795 TXNRD1Q16881 649 aa17.29■□□□□ 0.36
PACS1-210ENST00000529795 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
PACS1-210ENST00000529795 EYA1Q99502 592 aa17.29■□□□□ 0.36
PACS1-210ENST00000529795 BTAF1O14981 1849 aa17.28■□□□□ 0.36
PACS1-210ENST00000529795 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
PACS1-210ENST00000529795 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
PACS1-210ENST00000529795 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
PACS1-210ENST00000529795 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
PACS1-210ENST00000529795 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.36
PACS1-210ENST00000529795 SLC27A3Q5K4L6 730 aa17.26■□□□□ 0.35
PACS1-210ENST00000529795 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
PACS1-210ENST00000529795 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
PACS1-210ENST00000529795 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
PACS1-210ENST00000529795 LRP5O75197 1615 aa17.25■□□□□ 0.35
PACS1-210ENST00000529795 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
PACS1-210ENST00000529795 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
PACS1-210ENST00000529795 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
PACS1-210ENST00000529795 PROM2Q8N271 834 aa17.24■□□□□ 0.35
PACS1-210ENST00000529795 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
PACS1-210ENST00000529795 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
PACS1-210ENST00000529795 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
PACS1-210ENST00000529795 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
PACS1-210ENST00000529795 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
PACS1-210ENST00000529795 CYP27B1O15528 508 aa17.21■□□□□ 0.35
PACS1-210ENST00000529795 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
PACS1-210ENST00000529795 SLC15A2Q16348 729 aa17.21■□□□□ 0.35
PACS1-210ENST00000529795 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
PACS1-210ENST00000529795 SPON1Q9HCB6 807 aa17.21■□□□□ 0.35
PACS1-210ENST00000529795 MTHFSP49914 203 aa17.2■□□□□ 0.34
PACS1-210ENST00000529795 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
PACS1-210ENST00000529795 SRCAPQ6ZRS2 3230 aa17.18■□□□□ 0.34
PACS1-210ENST00000529795 LY75O60449 1722 aa17.18■□□□□ 0.34
PACS1-210ENST00000529795 ITGB4P16144 1822 aa17.17■□□□□ 0.34
PACS1-210ENST00000529795 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
PACS1-210ENST00000529795 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
PACS1-210ENST00000529795 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
PACS1-210ENST00000529795 PHKG2P15735 406 aa17.16■□□□□ 0.34
PACS1-210ENST00000529795 IL13P35225 146 aa17.16■□□□□ 0.34
PACS1-210ENST00000529795 C1orf141Q5JVX7 400 aa17.16■□□□□ 0.34
PACS1-210ENST00000529795 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
PACS1-210ENST00000529795 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
PACS1-210ENST00000529795 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
PACS1-210ENST00000529795 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
PACS1-210ENST00000529795 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
PACS1-210ENST00000529795 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
PACS1-210ENST00000529795 KDRP35968 1356 aa17.15■□□□□ 0.34
PACS1-210ENST00000529795 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
PACS1-210ENST00000529795 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
PACS1-210ENST00000529795 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
PACS1-210ENST00000529795 LRRC4BQ9NT99 713 aa17.13■□□□□ 0.33
PACS1-210ENST00000529795 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
PACS1-210ENST00000529795 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
PACS1-210ENST00000529795 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 CASZ1Q86V15 1759 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
PACS1-210ENST00000529795 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 PIGBQ92521 554 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
PACS1-210ENST00000529795 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
PACS1-210ENST00000529795 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
PACS1-210ENST00000529795 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
PACS1-210ENST00000529795 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
PACS1-210ENST00000529795 AEBP1Q8IUX7 1158 aa17.09■□□□□ 0.33
PACS1-210ENST00000529795 CABP4P57796 275 aa17.08■□□□□ 0.32
PACS1-210ENST00000529795 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
PACS1-210ENST00000529795 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
PACS1-210ENST00000529795 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
PACS1-210ENST00000529795 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
PACS1-210ENST00000529795 HMOX1P09601 288 aa17.06■□□□□ 0.32
PACS1-210ENST00000529795 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
PACS1-210ENST00000529795 C5P01031 1676 aa17.06■□□□□ 0.32
PACS1-210ENST00000529795 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
PACS1-210ENST00000529795 SIK1P57059 783 aa17.05■□□□□ 0.32
PACS1-210ENST00000529795 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
PACS1-210ENST00000529795 POLD1P28340 1107 aa17.04■□□□□ 0.32
PACS1-210ENST00000529795 PPP2R1AP30153 589 aa17.04■□□□□ 0.32
PACS1-210ENST00000529795 AK7Q96M32 723 aa17.04■□□□□ 0.32
PACS1-210ENST00000529795 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
PACS1-210ENST00000529795 MSH5O43196 834 aa17.03■□□□□ 0.32
PACS1-210ENST00000529795 KCNQ4P56696 695 aa17.03■□□□□ 0.32
PACS1-210ENST00000529795 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
PACS1-210ENST00000529795 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
PACS1-210ENST00000529795 ASAP1Q9ULH1 1129 aa17.03■□□□□ 0.32
PACS1-210ENST00000529795 PNPLA7Q6ZV29 1317 aa17.02■□□□□ 0.32
PACS1-210ENST00000529795 ZNF831Q5JPB2 1677 aa17.02■□□□□ 0.32
PACS1-210ENST00000529795 ATP6V1AP38606 617 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms