RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 C22orf23Q9BZE7 217 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 HYPKQ9NX55 129 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 PLEKHG3A1L390 1219 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 TRDNQ13061 729 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 DCTN1Q14203 1278 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 TMEM57Q8N5G2 664 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 USHBP1Q8N6Y0 703 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 ARHGAP45Q92619 1136 aa5.69□□□□□ -1.5
CASP4-207ENST00000529565 DBF4Q9UBU7 674 aaPredicted RBP5.69□□□□□ -1.5
CASP4-207ENST00000529565 UNC13BO14795 1591 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 FMNL2Q96PY5 1086 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 EIF4A2Q14240 407 aaKnown RBP5.68□□□□□ -1.5
CASP4-207ENST00000529565 PAXIP1Q6ZW49 1069 aaPredicted RBP5.68□□□□□ -1.5
CASP4-207ENST00000529565 KIF1BO60333 1816 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 EXOC5O00471 708 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 MYL6BP14649 208 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 TBC1D2BQ9UPU7 963 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 ATF5Q9Y2D1 282 aaPredicted RBP5.68□□□□□ -1.5
CASP4-207ENST00000529565 SOS1Q07889 1333 aaPredicted RBP5.68□□□□□ -1.5
CASP4-207ENST00000529565 CROCC2H7BZ55 1655 aa5.68□□□□□ -1.5
CASP4-207ENST00000529565 MPRIPQ6WCQ1 1025 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
CASP4-207ENST00000529565 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 PSMA5P28066 241 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 HSP90AB3PQ58FF7 597 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 NOL8Q76FK4 1167 aaKnown RBP5.67□□□□□ -1.5
CASP4-207ENST00000529565 FAM184AQ8NB25 1140 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 FSD1Q9BTV5 496 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 MBIPQ9NS73 344 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 KDM5AP29375 1690 aaKnown RBP5.67□□□□□ -1.5
CASP4-207ENST00000529565 TSPOAP1O95153 1857 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 PHF14O94880 888 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 AKAP17AQ02040 695 aaKnown RBP5.67□□□□□ -1.5
CASP4-207ENST00000529565 SKOR2Q2VWA4 1001 aaPredicted RBP5.67□□□□□ -1.5
CASP4-207ENST00000529565 AKAP4Q5JQC9 854 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 CCDC158Q5M9N0 1113 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 IP6K1Q92551 441 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 GNL3LQ9NVN8 582 aaKnown RBP5.67□□□□□ -1.5
CASP4-207ENST00000529565 MIS18AQ9NYP9 233 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 SBNO1A3KN83 1393 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 APPP05067 770 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 MCM2P49736 904 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 CCDC57Q2TAC2 916 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 CHMP5Q9NZZ3 219 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 ZNF652Q9Y2D9 606 aa5.67□□□□□ -1.5
CASP4-207ENST00000529565 PIK3R4Q99570 1358 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 CDC42BPBQ9Y5S2 1711 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 H3BQV1 296 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 GCP02774 474 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 LTKP29376 864 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 IFFO2Q5TF58 517 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 DNAAF4Q8WXU2 420 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 CNNM1Q9NRU3 951 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 CFAP65Q6ZU64 1925 aaKnown RBP5.66□□□□□ -1.5
CASP4-207ENST00000529565 PLA2R1Q13018 1463 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 UGGT1Q9NYU2 1555 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 HSPA2P54652 639 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 NUCB2P80303 420 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 FLIIQ13045 1269 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 NGLY1Q96IV0 654 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 BABAM1Q9NWV8 329 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 ADAMTS2O95450 1211 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 SNRPA1P09661 255 aaKnown RBP5.66□□□□□ -1.5
CASP4-207ENST00000529565 TRIM27P14373 513 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
CASP4-207ENST00000529565 WASHC4Q2M389 1173 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 RALYLQ86SE5 291 aaKnown RBP5.66□□□□□ -1.5
CASP4-207ENST00000529565 LRRC59Q96AG4 307 aaKnown RBP5.66□□□□□ -1.5
CASP4-207ENST00000529565 KIF1BPQ96EK5 621 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.66□□□□□ -1.5
CASP4-207ENST00000529565 CEP126Q9P2H0 1117 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 MAP3K19Q56UN5 1328 aa5.66□□□□□ -1.5
CASP4-207ENST00000529565 KDM5CP41229 1560 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 HOXC9P31274 260 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 RABEP1Q15276 862 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 ZCRB1Q8TBF4 217 aaKnown RBP5.65□□□□□ -1.5
CASP4-207ENST00000529565 ZRANB1Q9UGI0 708 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 PLEKHH1Q9ULM0 1364 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 FAM135BQ49AJ0 1406 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 ERICH2A1L162 156 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 CPLX1O14810 134 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 ZSCAN25Q6NSZ9 544 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 ARHGEF10O15013 1369 aa5.65□□□□□ -1.5
CASP4-207ENST00000529565 PTCD1O75127 700 aaKnown RBP5.65□□□□□ -1.51
CASP4-207ENST00000529565 TPM4P67936 248 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 SF3A1Q15459 793 aaKnown RBP5.65□□□□□ -1.51
CASP4-207ENST00000529565 CHRNA2Q15822 529 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 TTC39AQ5SRH9 613 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 TRIM34Q9BYJ4 488 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 BACH2Q9BYV9 841 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 FBLN1P23142 703 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 MPHOSPH8Q99549 860 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 RSPH6AQ9H0K4 717 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 FBXO3Q9UK99 471 aa5.65□□□□□ -1.51
CASP4-207ENST00000529565 MAP3K5Q99683 1374 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 LMTK2Q8IWU2 1503 aa5.64□□□□□ -1.51
CASP4-207ENST00000529565 DCAF8L1A6NGE4 600 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms