RNA–Protein interactions for RNA: ENST00000529535.1

ARHGAP42-206, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 2

Gene ARHGAP42, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-206ENST00000529535 SAMD9LQ8IVG5 1584 aa7.34□□□□□ -1.24
ARHGAP42-206ENST00000529535 MAST1Q9Y2H9 1570 aa7.34□□□□□ -1.24
ARHGAP42-206ENST00000529535 ZCCHC11Q5TAX3 1644 aaKnown RBP7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 RPRD2Q5VT52 1461 aaKnown RBP7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 ARHGAP5Q13017 1502 aa7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 FDX1P10109 184 aa7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 PDIA4P13667 645 aaKnown RBP7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
ARHGAP42-206ENST00000529535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 KDM5BQ9UGL1 1544 aa7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 ERCC6L2Q5T890 1561 aa7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 PTCRAQ6ISU1 281 aaPredicted RBP7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 ZNF777Q9ULD5 760 aaPredicted RBP7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 ARAP3Q8WWN8 1544 aa7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 PLXNC1O60486 1568 aa7.32□□□□□ -1.24
ARHGAP42-206ENST00000529535 CCNYL3P0C7X3 344 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 TSPY4P0CV99 314 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 TSPY10P0CW01 314 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 VEGFBP49765 207 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 C1orf115Q9H7X2 142 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 FAM217BQ9NTX9 383 aaPredicted RBP7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 KIAA1107Q9UPP5 1409 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 PZPP20742 1482 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 IRF7Q92985 503 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 ANKRD30BQ9BXX2 1392 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 MBD5Q9P267 1494 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 SYCP2Q9BX26 1530 aa7.31□□□□□ -1.24
ARHGAP42-206ENST00000529535 TEX14Q8IWB6 1497 aa7.3□□□□□ -1.24
ARHGAP42-206ENST00000529535 KIF15Q9NS87 1388 aa7.3□□□□□ -1.24
ARHGAP42-206ENST00000529535 PLEKHG3A1L390 1219 aa7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 GMPRP36959 345 aa7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 SH3BP2P78314 561 aa7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 SCARF1Q14162 830 aa7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 TTLL12Q14166 644 aaPredicted RBP7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 UNC93B1Q9H1C4 597 aa7.29□□□□□ -1.24
ARHGAP42-206ENST00000529535 UNC13BO14795 1591 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 CDK11BP21127 795 aaKnown RBP7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 TRIM46Q7Z4K8 759 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 BAP1Q92560 729 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 TLL2Q9Y6L7 1015 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 ABCC1P33527 1531 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 ARHGEF12Q9NZN5 1544 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 PLCH2O75038 1416 aa7.28□□□□□ -1.24
ARHGAP42-206ENST00000529535 SIAH2O43255 324 aa7.27□□□□□ -1.25
ARHGAP42-206ENST00000529535 CTHP32929 405 aa7.27□□□□□ -1.25
ARHGAP42-206ENST00000529535 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
ARHGAP42-206ENST00000529535 ZSCAN1Q8NBB4 408 aa7.27□□□□□ -1.25
ARHGAP42-206ENST00000529535 DUOX2Q9NRD8 1548 aa7.27□□□□□ -1.25
ARHGAP42-206ENST00000529535 WDR7Q9Y4E6 1490 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 ERBINQ96RT1 1412 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 HMGB1P09429 215 aaKnown RBP7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 NDUFV2P19404 249 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 PTPRNQ16849 979 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 PCDHGC3Q9UN70 934 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 NUP155O75694 1391 aa7.26□□□□□ -1.25
ARHGAP42-206ENST00000529535 FAM135AQ9P2D6 1515 aa7.25□□□□□ -1.25
ARHGAP42-206ENST00000529535 ABCA9Q8IUA7 1624 aa7.25□□□□□ -1.25
ARHGAP42-206ENST00000529535 NNTQ13423 1086 aa7.25□□□□□ -1.25
ARHGAP42-206ENST00000529535 ARID5BQ14865 1188 aa7.25□□□□□ -1.25
ARHGAP42-206ENST00000529535 POLR1AO95602 1720 aaPredicted RBP7.25□□□□□ -1.25
ARHGAP42-206ENST00000529535 IQGAP3Q86VI3 1631 aa7.25□□□□□ -1.25
ARHGAP42-206ENST00000529535 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 KCNH2Q12809 1159 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 EFCAB2Q5VUJ9 269 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 NPAS3Q8IXF0 933 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 EVA1BQ9NVM1 165 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 MAGI2Q86UL8 1455 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 HNRNPMP52272 730 aaKnown RBP eCLIP7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 WDR4P57081 412 aaKnown RBP7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 EIF4G2P78344 907 aaKnown RBP eCLIP7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 MTMR2Q13614 643 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 AGERQ15109 404 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 ZNF511Q8NB15 262 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 SPIRE2Q8WWL2 714 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 L3MBTL2Q969R5 705 aa7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 YTHDC1Q96MU7 727 aaKnown RBP7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 PURBQ96QR8 312 aaKnown RBP7.24□□□□□ -1.25
ARHGAP42-206ENST00000529535 CFAP74Q9C0B2 1584 aa7.23□□□□□ -1.25
ARHGAP42-206ENST00000529535 MOXD2PA6NHM9 499 aa7.23□□□□□ -1.25
ARHGAP42-206ENST00000529535 RTEL1-TNFRSF6BF6WH68 1400 aa7.23□□□□□ -1.25
ARHGAP42-206ENST00000529535 H3BM21 787 aa7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 MRPL14Q6P1L8 145 aaKnown RBP7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 FAM174AQ8TBP5 190 aa7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 ZFYVE16Q7Z3T8 1539 aa7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 CCER2I3L3R5 266 aa7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 ANP32CO43423 234 aa7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 DDX10Q13206 875 aaKnown RBP7.22□□□□□ -1.25
ARHGAP42-206ENST00000529535 UHRF1BP1Q6BDS2 1440 aa7.21□□□□□ -1.25
ARHGAP42-206ENST00000529535 INO80Q9ULG1 1556 aaPredicted RBP7.21□□□□□ -1.26
ARHGAP42-206ENST00000529535 RALGAPBQ86X10 1494 aa7.21□□□□□ -1.26
ARHGAP42-206ENST00000529535 SPDYE5A6NIY4 337 aa7.21□□□□□ -1.26
ARHGAP42-206ENST00000529535 ADH1CP00326 375 aa7.21□□□□□ -1.26
ARHGAP42-206ENST00000529535 SLC24A3Q9HC58 644 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms