RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 LRRC4BQ9NT99 713 aa22.38■■□□□ 1.17
TRIM3-209ENST00000529529 EMILIN1Q9Y6C2 1016 aa22.38■■□□□ 1.17
TRIM3-209ENST00000529529 FLT4P35916 1363 aa22.38■■□□□ 1.17
TRIM3-209ENST00000529529 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
TRIM3-209ENST00000529529 TATP17735 454 aaPredicted RBP22.37■■□□□ 1.17
TRIM3-209ENST00000529529 KIF24Q5T7B8 1368 aa22.37■■□□□ 1.17
TRIM3-209ENST00000529529 MEGF6O75095 1541 aa22.36■■□□□ 1.17
TRIM3-209ENST00000529529 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
TRIM3-209ENST00000529529 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
TRIM3-209ENST00000529529 MYOM1P52179 1685 aa22.34■■□□□ 1.17
TRIM3-209ENST00000529529 BTAF1O14981 1849 aa22.34■■□□□ 1.17
TRIM3-209ENST00000529529 KIF20BQ96Q89 1820 aa22.34■■□□□ 1.17
TRIM3-209ENST00000529529 PTGER2P43116 358 aa22.33■■□□□ 1.17
TRIM3-209ENST00000529529 SLC27A3Q5K4L6 730 aa22.33■■□□□ 1.17
TRIM3-209ENST00000529529 KAT6BQ8WYB5 2073 aa22.33■■□□□ 1.17
TRIM3-209ENST00000529529 KCNQ4P56696 695 aa22.32■■□□□ 1.16
TRIM3-209ENST00000529529 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
TRIM3-209ENST00000529529 MTFR1LQ9H019 292 aa22.32■■□□□ 1.16
TRIM3-209ENST00000529529 CASZ1Q86V15 1759 aa22.32■■□□□ 1.16
TRIM3-209ENST00000529529 DCAF8L1A6NGE4 600 aa22.3■■□□□ 1.16
TRIM3-209ENST00000529529 PANK3Q9H999 370 aa22.3■■□□□ 1.16
TRIM3-209ENST00000529529 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
TRIM3-209ENST00000529529 TNNT2P45379 298 aaPredicted RBP22.29■■□□□ 1.16
TRIM3-209ENST00000529529 AKT1S1Q96B36 256 aa22.29■■□□□ 1.16
TRIM3-209ENST00000529529 POLKQ9UBT6 870 aa22.29■■□□□ 1.16
TRIM3-209ENST00000529529 NSD2O96028 1365 aa22.28■■□□□ 1.16
TRIM3-209ENST00000529529 PCDH11XQ9BZA7 1347 aa22.28■■□□□ 1.16
TRIM3-209ENST00000529529 PCDH11YQ9BZA8 1340 aa22.28■■□□□ 1.16
TRIM3-209ENST00000529529 EYA1Q99502 592 aa22.26■■□□□ 1.15
TRIM3-209ENST00000529529 TFCP2L1Q9NZI6 479 aa22.26■■□□□ 1.15
TRIM3-209ENST00000529529 CYP27B1O15528 508 aa22.25■■□□□ 1.15
TRIM3-209ENST00000529529 CCNL1Q9UK58 526 aaPredicted RBP22.25■■□□□ 1.15
TRIM3-209ENST00000529529 PAPPAQ13219 1627 aa22.24■■□□□ 1.15
TRIM3-209ENST00000529529 SHANK3Q9BYB0 1731 aa22.24■■□□□ 1.15
TRIM3-209ENST00000529529 MPRIPQ6WCQ1 1025 aa22.24■■□□□ 1.15
TRIM3-209ENST00000529529 SGIP1Q9BQI5 828 aa22.24■■□□□ 1.15
TRIM3-209ENST00000529529 SYT17Q9BSW7 474 aa22.23■■□□□ 1.15
TRIM3-209ENST00000529529 FHDC1Q9C0D6 1143 aaPredicted RBP22.23■■□□□ 1.15
TRIM3-209ENST00000529529 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
TRIM3-209ENST00000529529 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
TRIM3-209ENST00000529529 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
TRIM3-209ENST00000529529 ARXQ96QS3 562 aa22.22■■□□□ 1.15
TRIM3-209ENST00000529529 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
TRIM3-209ENST00000529529 EIF4A2Q14240 407 aaKnown RBP22.2■■□□□ 1.14
TRIM3-209ENST00000529529 YY1P25490 414 aa22.19■■□□□ 1.14
TRIM3-209ENST00000529529 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
TRIM3-209ENST00000529529 MORC1Q86VD1 984 aa22.18■■□□□ 1.14
TRIM3-209ENST00000529529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.18■■□□□ 1.14
TRIM3-209ENST00000529529 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
TRIM3-209ENST00000529529 NCAPD2Q15021 1401 aa22.17■■□□□ 1.14
TRIM3-209ENST00000529529 MSH5O43196 834 aa22.17■■□□□ 1.14
TRIM3-209ENST00000529529 POLD1P28340 1107 aa22.16■■□□□ 1.14
TRIM3-209ENST00000529529 KNSTRNQ9Y448 316 aa22.16■■□□□ 1.14
TRIM3-209ENST00000529529 PALLDQ8WX93 1383 aa22.15■■□□□ 1.14
TRIM3-209ENST00000529529 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
TRIM3-209ENST00000529529 PIGBQ92521 554 aa22.15■■□□□ 1.14
TRIM3-209ENST00000529529 SMARCC1Q92922 1105 aaPredicted RBP22.15■■□□□ 1.14
TRIM3-209ENST00000529529 LY75O60449 1722 aa22.14■■□□□ 1.14
TRIM3-209ENST00000529529 HMGB2P26583 209 aaKnown RBP22.14■■□□□ 1.13
TRIM3-209ENST00000529529 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
TRIM3-209ENST00000529529 ANKRD26Q9UPS8 1709 aa22.14■■□□□ 1.13
TRIM3-209ENST00000529529 PHKG2P15735 406 aa22.13■■□□□ 1.13
TRIM3-209ENST00000529529 KLHL34Q8N239 644 aa22.12■■□□□ 1.13
TRIM3-209ENST00000529529 TMOD3Q9NYL9 352 aa22.11■■□□□ 1.13
TRIM3-209ENST00000529529 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
TRIM3-209ENST00000529529 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
TRIM3-209ENST00000529529 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.13
TRIM3-209ENST00000529529 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
TRIM3-209ENST00000529529 QSER1Q2KHR3 1735 aa22.07■■□□□ 1.12
TRIM3-209ENST00000529529 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
TRIM3-209ENST00000529529 ASAP1Q9ULH1 1129 aa22.07■■□□□ 1.12
TRIM3-209ENST00000529529 MAP3K5Q99683 1374 aa22.07■■□□□ 1.12
TRIM3-209ENST00000529529 MSL1Q68DK7 614 aa22.06■■□□□ 1.12
TRIM3-209ENST00000529529 AK7Q96M32 723 aa22.06■■□□□ 1.12
TRIM3-209ENST00000529529 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
TRIM3-209ENST00000529529 LOC102724428A0A0B4J2F2 783 aa22.05■■□□□ 1.12
TRIM3-209ENST00000529529 SIK1P57059 783 aa22.05■■□□□ 1.12
TRIM3-209ENST00000529529 AMER1Q5JTC6 1135 aaPredicted RBP22.05■■□□□ 1.12
TRIM3-209ENST00000529529 GPR162Q16538 588 aa22.04■■□□□ 1.12
TRIM3-209ENST00000529529 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
TRIM3-209ENST00000529529 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
TRIM3-209ENST00000529529 ITGB4P16144 1822 aa22.03■■□□□ 1.12
TRIM3-209ENST00000529529 ERVV-2B6SEH9 535 aa22.03■■□□□ 1.12
TRIM3-209ENST00000529529 HSP90AB1P08238 724 aaKnown RBP22.03■■□□□ 1.12
TRIM3-209ENST00000529529 ATP6V1AP38606 617 aa22.03■■□□□ 1.12
TRIM3-209ENST00000529529 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
TRIM3-209ENST00000529529 TUBGCP6Q96RT7 1819 aa22.03■■□□□ 1.12
TRIM3-209ENST00000529529 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.12
TRIM3-209ENST00000529529 SULT6B1Q6IMI4 303 aa22.02■■□□□ 1.12
TRIM3-209ENST00000529529 ZNF530Q6P9A1 599 aaPredicted RBP22.02■■□□□ 1.12
TRIM3-209ENST00000529529 SMIM5Q71RC9 77 aa22.02■■□□□ 1.12
TRIM3-209ENST00000529529 LINC00116Q8NCU8 138 aa22.02■■□□□ 1.12
TRIM3-209ENST00000529529 DCAF5Q96JK2 942 aa22.02■■□□□ 1.12
TRIM3-209ENST00000529529 C5P01031 1676 aa22.01■■□□□ 1.11
TRIM3-209ENST00000529529 PHF14O94880 888 aa22.01■■□□□ 1.11
TRIM3-209ENST00000529529 IL13P35225 146 aa22.01■■□□□ 1.11
TRIM3-209ENST00000529529 ITPK1Q13572 414 aa22.01■■□□□ 1.11
TRIM3-209ENST00000529529 AMIGO3Q86WK7 504 aa22.01■■□□□ 1.11
TRIM3-209ENST00000529529 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
TRIM3-209ENST00000529529 PER1O15534 1290 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms