RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
CTR9-204ENST00000529355 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
CTR9-204ENST00000529355 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
CTR9-204ENST00000529355 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
CTR9-204ENST00000529355 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
CTR9-204ENST00000529355 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
CTR9-204ENST00000529355 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
CTR9-204ENST00000529355 SRPK2P78362 688 aaKnown RBP9.25□□□□□ -0.93
CTR9-204ENST00000529355 KANK4Q5T7N3 995 aaPredicted RBP9.25□□□□□ -0.93
CTR9-204ENST00000529355 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
CTR9-204ENST00000529355 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
CTR9-204ENST00000529355 ZNF592Q92610 1267 aa9.25□□□□□ -0.93
CTR9-204ENST00000529355 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
CTR9-204ENST00000529355 TERTO14746 1132 aaKnown RBP9.24□□□□□ -0.93
CTR9-204ENST00000529355 AXIN1O15169 862 aa9.24□□□□□ -0.93
CTR9-204ENST00000529355 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
CTR9-204ENST00000529355 DHX9Q08211 1270 aaKnown RBP9.24□□□□□ -0.93
CTR9-204ENST00000529355 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
CTR9-204ENST00000529355 OSBPL3Q9H4L5 887 aa9.24□□□□□ -0.93
CTR9-204ENST00000529355 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
CTR9-204ENST00000529355 AVPP01185 164 aa9.23□□□□□ -0.93
CTR9-204ENST00000529355 CAPN5O15484 640 aaPredicted RBP9.22□□□□□ -0.93
CTR9-204ENST00000529355 MAP7D1Q3KQU3 841 aa9.22□□□□□ -0.93
CTR9-204ENST00000529355 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
CTR9-204ENST00000529355 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
CTR9-204ENST00000529355 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
CTR9-204ENST00000529355 BMP1P13497 986 aa9.21□□□□□ -0.94
CTR9-204ENST00000529355 CLDN10P78369 228 aa9.21□□□□□ -0.94
CTR9-204ENST00000529355 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
CTR9-204ENST00000529355 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
CTR9-204ENST00000529355 PCDHGA11Q9Y5H2 935 aa9.21□□□□□ -0.94
CTR9-204ENST00000529355 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
CTR9-204ENST00000529355 EML3Q32P44 896 aa9.2□□□□□ -0.94
CTR9-204ENST00000529355 Q6ZVU0 165 aa9.2□□□□□ -0.94
CTR9-204ENST00000529355 RELBQ01201 579 aa9.19□□□□□ -0.94
CTR9-204ENST00000529355 USP4Q13107 963 aa9.19□□□□□ -0.94
CTR9-204ENST00000529355 CRTC2Q53ET0 693 aaPredicted RBP9.19□□□□□ -0.94
CTR9-204ENST00000529355 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
CTR9-204ENST00000529355 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
CTR9-204ENST00000529355 RAB6BQ9NRW1 208 aa9.19□□□□□ -0.94
CTR9-204ENST00000529355 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
CTR9-204ENST00000529355 GTF2IP78347 998 aa9.18□□□□□ -0.94
CTR9-204ENST00000529355 TRIM46Q7Z4K8 759 aa9.18□□□□□ -0.94
CTR9-204ENST00000529355 ADH1AP07327 375 aa9.17□□□□□ -0.94
CTR9-204ENST00000529355 OGFOD1Q8N543 542 aa9.17□□□□□ -0.94
CTR9-204ENST00000529355 MEIOBQ8N635 442 aa9.17□□□□□ -0.94
CTR9-204ENST00000529355 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
CTR9-204ENST00000529355 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
CTR9-204ENST00000529355 NOD1Q9Y239 953 aa9.17□□□□□ -0.94
CTR9-204ENST00000529355 LGR5O75473 907 aa9.16□□□□□ -0.94
CTR9-204ENST00000529355 DKK1O94907 266 aa9.16□□□□□ -0.94
CTR9-204ENST00000529355 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
CTR9-204ENST00000529355 C6orf118Q5T5N4 469 aa9.16□□□□□ -0.94
CTR9-204ENST00000529355 ZNF594Q96JF6 807 aaPredicted RBP9.16□□□□□ -0.94
CTR9-204ENST00000529355 CARNS1A5YM72 827 aa9.15□□□□□ -0.94
CTR9-204ENST00000529355 RASA1P20936 1047 aa9.15□□□□□ -0.94
CTR9-204ENST00000529355 SCNN1DP51172 638 aa9.15□□□□□ -0.94
CTR9-204ENST00000529355 ARHGEF10LQ9HCE6 1279 aa9.15□□□□□ -0.94
CTR9-204ENST00000529355 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
CTR9-204ENST00000529355 LZTS3O60299 673 aaPredicted RBP9.14□□□□□ -0.95
CTR9-204ENST00000529355 PTK7Q13308 1070 aa9.14□□□□□ -0.95
CTR9-204ENST00000529355 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
CTR9-204ENST00000529355 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTR9-204ENST00000529355 PURBQ96QR8 312 aaKnown RBP9.14□□□□□ -0.95
CTR9-204ENST00000529355 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
CTR9-204ENST00000529355 A0A1W2PRU2 124 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 TMEM229AB2RXF0 380 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 IL2RAP01589 272 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 PTGIRP43119 386 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 MRPL14Q6P1L8 145 aaKnown RBP9.13□□□□□ -0.95
CTR9-204ENST00000529355 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
CTR9-204ENST00000529355 INSM2Q96T92 566 aaPredicted RBP9.13□□□□□ -0.95
CTR9-204ENST00000529355 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
CTR9-204ENST00000529355 SFI1A8K8P3 1242 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L15C9J2P7 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L10C9JJH3 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L13C9JLJ4 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L12C9JPN9 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L11C9JVI0 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L21D6R901 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L18D6R9N7 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L22D6RA61 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L17D6RBQ6 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L19D6RCP7 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L20D6RJB6 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 PSME1Q06323 249 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 USP17L24Q0WX57 530 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 TPCN2Q8NHX9 752 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 GAS2L2Q8NHY3 880 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 ZFP42Q96MM3 310 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 ARXQ96QS3 562 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 ESF1Q9H501 851 aaKnown RBP9.12□□□□□ -0.95
CTR9-204ENST00000529355 SENP2Q9HC62 589 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 ZMIZ1Q9ULJ6 1067 aa9.12□□□□□ -0.95
CTR9-204ENST00000529355 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
CTR9-204ENST00000529355 DPYDQ12882 1025 aa9.11□□□□□ -0.95
CTR9-204ENST00000529355 CCDC102BQ68D86 513 aa9.11□□□□□ -0.95
CTR9-204ENST00000529355 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms