RNA–Protein interactions for RNA: ENST00000529328.1

LINC00958-204, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 580 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-204ENST00000529328 HAX1O00165 279 aa8.68□□□□□ -1.02
LINC00958-204ENST00000529328 MARCH10Q8NA82 808 aaPredicted RBP8.68□□□□□ -1.02
LINC00958-204ENST00000529328 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
LINC00958-204ENST00000529328 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
LINC00958-204ENST00000529328 MAP2P11137 1827 aaKnown RBP8.67□□□□□ -1.02
LINC00958-204ENST00000529328 NEUROD1Q13562 356 aa8.67□□□□□ -1.02
LINC00958-204ENST00000529328 TONSLQ96HA7 1378 aa8.67□□□□□ -1.02
LINC00958-204ENST00000529328 SOX12O15370 315 aa8.66□□□□□ -1.02
LINC00958-204ENST00000529328 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
LINC00958-204ENST00000529328 PTF1AQ7RTS3 328 aa8.66□□□□□ -1.02
LINC00958-204ENST00000529328 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
LINC00958-204ENST00000529328 CARD11Q9BXL7 1154 aa8.66□□□□□ -1.02
LINC00958-204ENST00000529328 SPON1Q9HCB6 807 aa8.66□□□□□ -1.02
LINC00958-204ENST00000529328 KCNQ2O43526 872 aa8.65□□□□□ -1.02
LINC00958-204ENST00000529328 NME9Q86XW9 330 aa8.65□□□□□ -1.02
LINC00958-204ENST00000529328 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
LINC00958-204ENST00000529328 VIRMAQ69YN4 1812 aaKnown RBP8.65□□□□□ -1.02
LINC00958-204ENST00000529328 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
LINC00958-204ENST00000529328 RTL1A6NKG5 1358 aa8.64□□□□□ -1.03
LINC00958-204ENST00000529328 EVX2Q03828 476 aa8.64□□□□□ -1.03
LINC00958-204ENST00000529328 HDGFL2Q7Z4V5 671 aaPredicted RBP8.64□□□□□ -1.03
LINC00958-204ENST00000529328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00958-204ENST00000529328 MEGF6O75095 1541 aa8.64□□□□□ -1.03
LINC00958-204ENST00000529328 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
LINC00958-204ENST00000529328 UTRNP46939 3433 aa8.63□□□□□ -1.03
LINC00958-204ENST00000529328 EXOC5O00471 708 aa8.63□□□□□ -1.03
LINC00958-204ENST00000529328 PROM2Q8N271 834 aa8.63□□□□□ -1.03
LINC00958-204ENST00000529328 PPP1R1BQ9UD71 204 aaPredicted RBP8.63□□□□□ -1.03
LINC00958-204ENST00000529328 IL2RBP14784 551 aa8.62□□□□□ -1.03
LINC00958-204ENST00000529328 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
LINC00958-204ENST00000529328 ANKRD24Q8TF21 1146 aa8.62□□□□□ -1.03
LINC00958-204ENST00000529328 TESK2Q96S53 571 aa8.62□□□□□ -1.03
LINC00958-204ENST00000529328 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
LINC00958-204ENST00000529328 SLC12A5Q9H2X9 1139 aa8.62□□□□□ -1.03
LINC00958-204ENST00000529328 TERF2IPQ9NYB0 399 aa8.62□□□□□ -1.03
LINC00958-204ENST00000529328 GOLGB1Q14789 3259 aaKnown RBP8.61□□□□□ -1.03
LINC00958-204ENST00000529328 C4BP0C0L5 1744 aa8.61□□□□□ -1.03
LINC00958-204ENST00000529328 TMC1Q8TDI8 760 aa8.61□□□□□ -1.03
LINC00958-204ENST00000529328 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
LINC00958-204ENST00000529328 NSD2O96028 1365 aa8.61□□□□□ -1.03
LINC00958-204ENST00000529328 MAP3K5Q99683 1374 aa8.61□□□□□ -1.03
LINC00958-204ENST00000529328 ZNF831Q5JPB2 1677 aa8.6□□□□□ -1.03
LINC00958-204ENST00000529328 PTGER2P43116 358 aa8.6□□□□□ -1.03
LINC00958-204ENST00000529328 SLC15A2Q16348 729 aa8.6□□□□□ -1.03
LINC00958-204ENST00000529328 STK32BQ9NY57 414 aa8.6□□□□□ -1.03
LINC00958-204ENST00000529328 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
LINC00958-204ENST00000529328 USP47Q96K76 1375 aa8.6□□□□□ -1.03
LINC00958-204ENST00000529328 C19orf67A6NJJ6 358 aa8.59□□□□□ -1.03
LINC00958-204ENST00000529328 ZBTB7AO95365 584 aa8.59□□□□□ -1.03
LINC00958-204ENST00000529328 YY1P25490 414 aa8.59□□□□□ -1.03
LINC00958-204ENST00000529328 IP6K1Q92551 441 aa8.59□□□□□ -1.03
LINC00958-204ENST00000529328 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
LINC00958-204ENST00000529328 NCAPD2Q15021 1401 aa8.59□□□□□ -1.03
LINC00958-204ENST00000529328 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
LINC00958-204ENST00000529328 MAP3K19Q56UN5 1328 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 ST20-MTHFSA0A0A6YYL1 179 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 HOXC9P31274 260 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 ACSBG1Q96GR2 724 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 KIF13BQ9NQT8 1826 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 KIF24Q5T7B8 1368 aa8.58□□□□□ -1.04
LINC00958-204ENST00000529328 C4AP0C0L4 1744 aa8.57□□□□□ -1.04
LINC00958-204ENST00000529328 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
LINC00958-204ENST00000529328 ZNF827Q17R98 1081 aa8.57□□□□□ -1.04
LINC00958-204ENST00000529328 COG3Q96JB2 828 aa8.57□□□□□ -1.04
LINC00958-204ENST00000529328 CREBZFQ9NS37 354 aa8.57□□□□□ -1.04
LINC00958-204ENST00000529328 CICQ96RK0 1608 aaPredicted RBP8.57□□□□□ -1.04
LINC00958-204ENST00000529328 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
LINC00958-204ENST00000529328 LRRC4BQ9NT99 713 aa8.56□□□□□ -1.04
LINC00958-204ENST00000529328 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
LINC00958-204ENST00000529328 KIAA1551Q9HCM1 1747 aa8.56□□□□□ -1.04
LINC00958-204ENST00000529328 FLT4P35916 1363 aa8.56□□□□□ -1.04
LINC00958-204ENST00000529328 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
LINC00958-204ENST00000529328 FHDC1Q9C0D6 1143 aaPredicted RBP8.55□□□□□ -1.04
LINC00958-204ENST00000529328 INSRP06213 1382 aa8.55□□□□□ -1.04
LINC00958-204ENST00000529328 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
LINC00958-204ENST00000529328 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
LINC00958-204ENST00000529328 NSD3Q9BZ95 1437 aa8.54□□□□□ -1.04
LINC00958-204ENST00000529328 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
LINC00958-204ENST00000529328 SYT17Q9BSW7 474 aa8.54□□□□□ -1.04
LINC00958-204ENST00000529328 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
LINC00958-204ENST00000529328 AMPHP49418 695 aa8.53□□□□□ -1.04
LINC00958-204ENST00000529328 TMF1P82094 1093 aa8.53□□□□□ -1.04
LINC00958-204ENST00000529328 DDX54Q8TDD1 881 aaKnown RBP8.53□□□□□ -1.04
LINC00958-204ENST00000529328 ARXQ96QS3 562 aa8.53□□□□□ -1.04
LINC00958-204ENST00000529328 PCDH11XQ9BZA7 1347 aa8.53□□□□□ -1.04
LINC00958-204ENST00000529328 PCDH11YQ9BZA8 1340 aa8.53□□□□□ -1.04
LINC00958-204ENST00000529328 FYB1O15117 783 aa8.52□□□□□ -1.05
LINC00958-204ENST00000529328 FBLN1P23142 703 aa8.52□□□□□ -1.05
LINC00958-204ENST00000529328 FKBP8Q14318 412 aa8.52□□□□□ -1.05
LINC00958-204ENST00000529328 RRS1Q15050 365 aaKnown RBP8.52□□□□□ -1.05
LINC00958-204ENST00000529328 ZCRB1Q8TBF4 217 aaKnown RBP8.52□□□□□ -1.05
LINC00958-204ENST00000529328 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.05
LINC00958-204ENST00000529328 TJP1Q07157 1748 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 PLEKHG2Q9H7P9 1386 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 N4BP2Q86UW6 1770 aaPredicted RBP8.51□□□□□ -1.05
LINC00958-204ENST00000529328 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
LINC00958-204ENST00000529328 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 NBPF6Q5VWK0 638 aa8.51□□□□□ -1.05
LINC00958-204ENST00000529328 SYTL4Q96C24 671 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms