RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 ZCRB1Q8TBF4 217 aaKnown RBP18.58■□□□□ 0.56
SNRNP35-205ENST00000529201 NBPF4Q96M43 638 aa18.58■□□□□ 0.56
SNRNP35-205ENST00000529201 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
SNRNP35-205ENST00000529201 KCNQ2O43526 872 aa18.57■□□□□ 0.56
SNRNP35-205ENST00000529201 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
SNRNP35-205ENST00000529201 HSP90AB2PQ58FF8 381 aa18.57■□□□□ 0.56
SNRNP35-205ENST00000529201 PROM2Q8N271 834 aa18.57■□□□□ 0.56
SNRNP35-205ENST00000529201 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
SNRNP35-205ENST00000529201 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
SNRNP35-205ENST00000529201 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
SNRNP35-205ENST00000529201 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
SNRNP35-205ENST00000529201 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
SNRNP35-205ENST00000529201 KAT6BQ8WYB5 2073 aa18.55■□□□□ 0.56
SNRNP35-205ENST00000529201 NSD2O96028 1365 aa18.55■□□□□ 0.56
SNRNP35-205ENST00000529201 WASHC2AQ641Q2 1341 aa18.54■□□□□ 0.56
SNRNP35-205ENST00000529201 BTAF1O14981 1849 aa18.54■□□□□ 0.56
SNRNP35-205ENST00000529201 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
SNRNP35-205ENST00000529201 PANK3Q9H999 370 aa18.54■□□□□ 0.56
SNRNP35-205ENST00000529201 EMILIN1Q9Y6C2 1016 aa18.54■□□□□ 0.56
SNRNP35-205ENST00000529201 MEGF6O75095 1541 aa18.54■□□□□ 0.56
SNRNP35-205ENST00000529201 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
SNRNP35-205ENST00000529201 STK32BQ9NY57 414 aa18.52■□□□□ 0.56
SNRNP35-205ENST00000529201 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
SNRNP35-205ENST00000529201 SPON1Q9HCB6 807 aa18.51■□□□□ 0.55
SNRNP35-205ENST00000529201 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
SNRNP35-205ENST00000529201 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
SNRNP35-205ENST00000529201 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 SLC15A2Q16348 729 aa18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 ANO8Q9HCE9 1232 aaPredicted RBP18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
SNRNP35-205ENST00000529201 PLEKHG2Q9H7P9 1386 aa18.48■□□□□ 0.55
SNRNP35-205ENST00000529201 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
SNRNP35-205ENST00000529201 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
SNRNP35-205ENST00000529201 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
SNRNP35-205ENST00000529201 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
SNRNP35-205ENST00000529201 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
SNRNP35-205ENST00000529201 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNRNP35-205ENST00000529201 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
SNRNP35-205ENST00000529201 PKD1L3Q7Z443 1732 aa18.45■□□□□ 0.54
SNRNP35-205ENST00000529201 PAPPAQ13219 1627 aa18.45■□□□□ 0.54
SNRNP35-205ENST00000529201 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
SNRNP35-205ENST00000529201 EYA1Q99502 592 aa18.44■□□□□ 0.54
SNRNP35-205ENST00000529201 LY75O60449 1722 aa18.43■□□□□ 0.54
SNRNP35-205ENST00000529201 TNNT2P45379 298 aaPredicted RBP18.43■□□□□ 0.54
SNRNP35-205ENST00000529201 PPP1R1BQ9UD71 204 aaPredicted RBP18.43■□□□□ 0.54
SNRNP35-205ENST00000529201 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
SNRNP35-205ENST00000529201 EIF4A2Q14240 407 aaKnown RBP18.42■□□□□ 0.54
SNRNP35-205ENST00000529201 LRRC4BQ9NT99 713 aa18.42■□□□□ 0.54
SNRNP35-205ENST00000529201 CYP27B1O15528 508 aa18.41■□□□□ 0.54
SNRNP35-205ENST00000529201 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
SNRNP35-205ENST00000529201 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
SNRNP35-205ENST00000529201 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
SNRNP35-205ENST00000529201 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
SNRNP35-205ENST00000529201 AMER1Q5JTC6 1135 aaPredicted RBP18.38■□□□□ 0.53
SNRNP35-205ENST00000529201 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
SNRNP35-205ENST00000529201 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
SNRNP35-205ENST00000529201 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
SNRNP35-205ENST00000529201 SLC16A10Q8TF71 515 aa18.37■□□□□ 0.53
SNRNP35-205ENST00000529201 PDGFDQ9GZP0 370 aaPredicted RBP18.37■□□□□ 0.53
SNRNP35-205ENST00000529201 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
SNRNP35-205ENST00000529201 ITGB4P16144 1822 aa18.37■□□□□ 0.53
SNRNP35-205ENST00000529201 PER1O15534 1290 aaPredicted RBP18.36■□□□□ 0.53
SNRNP35-205ENST00000529201 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
SNRNP35-205ENST00000529201 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
SNRNP35-205ENST00000529201 PTGER2P43116 358 aa18.35■□□□□ 0.53
SNRNP35-205ENST00000529201 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
SNRNP35-205ENST00000529201 AMOTQ4VCS5 1084 aa18.34■□□□□ 0.53
SNRNP35-205ENST00000529201 TFCP2L1Q9NZI6 479 aa18.34■□□□□ 0.53
SNRNP35-205ENST00000529201 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
SNRNP35-205ENST00000529201 TOGARAM1Q9Y4F4 1720 aa18.34■□□□□ 0.53
SNRNP35-205ENST00000529201 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.52
SNRNP35-205ENST00000529201 PHKG2P15735 406 aa18.33■□□□□ 0.52
SNRNP35-205ENST00000529201 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
SNRNP35-205ENST00000529201 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
SNRNP35-205ENST00000529201 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
SNRNP35-205ENST00000529201 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
SNRNP35-205ENST00000529201 C5P01031 1676 aa18.31■□□□□ 0.52
SNRNP35-205ENST00000529201 PNPLA7Q6ZV29 1317 aa18.3■□□□□ 0.52
SNRNP35-205ENST00000529201 PIGBQ92521 554 aa18.3■□□□□ 0.52
SNRNP35-205ENST00000529201 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
SNRNP35-205ENST00000529201 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
SNRNP35-205ENST00000529201 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 IL13P35225 146 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 KCNQ4P56696 695 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 FLAD1Q8NFF5 587 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 KDRP35968 1356 aa18.29■□□□□ 0.52
SNRNP35-205ENST00000529201 KCNA4P22459 653 aa18.27■□□□□ 0.52
SNRNP35-205ENST00000529201 POLD1P28340 1107 aa18.27■□□□□ 0.52
SNRNP35-205ENST00000529201 MTHFSP49914 203 aa18.27■□□□□ 0.52
SNRNP35-205ENST00000529201 ARXQ96QS3 562 aa18.27■□□□□ 0.52
SNRNP35-205ENST00000529201 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
SNRNP35-205ENST00000529201 SULT6B1Q6IMI4 303 aa18.26■□□□□ 0.51
SNRNP35-205ENST00000529201 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
SNRNP35-205ENST00000529201 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms