RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SLC12A5Q9H2X9 1139 aa27.14■■□□□ 1.94
SSRP1-204ENST00000529002 MSH5O43196 834 aa27.13■■□□□ 1.93
SSRP1-204ENST00000529002 MSL1Q68DK7 614 aa27.13■■□□□ 1.93
SSRP1-204ENST00000529002 COL23A1Q86Y22 540 aaPredicted RBP27.12■■□□□ 1.93
SSRP1-204ENST00000529002 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
SSRP1-204ENST00000529002 ANKRD36BQ8N2N9 1353 aa27.11■■□□□ 1.93
SSRP1-204ENST00000529002 ATP10DQ9P241 1426 aa27.11■■□□□ 1.93
SSRP1-204ENST00000529002 FBLN1P23142 703 aa27.1■■□□□ 1.93
SSRP1-204ENST00000529002 IP6K1Q92551 441 aa27.1■■□□□ 1.93
SSRP1-204ENST00000529002 CCNL1Q9UK58 526 aaPredicted RBP27.1■■□□□ 1.93
SSRP1-204ENST00000529002 NEUROD1Q13562 356 aa27.09■■□□□ 1.93
SSRP1-204ENST00000529002 GRIN3BO60391 1043 aa27.08■■□□□ 1.93
SSRP1-204ENST00000529002 HDGFL2Q7Z4V5 671 aaPredicted RBP27.08■■□□□ 1.93
SSRP1-204ENST00000529002 EDC4Q6P2E9 1401 aaKnown RBP27.07■■□□□ 1.92
SSRP1-204ENST00000529002 A0A1W2PP64 1363 aa27.06■■□□□ 1.92
SSRP1-204ENST00000529002 MEGF6O75095 1541 aa27.06■■□□□ 1.92
SSRP1-204ENST00000529002 ZCRB1Q8TBF4 217 aaKnown RBP27.04■■□□□ 1.92
SSRP1-204ENST00000529002 ZNF526Q8TF50 670 aaPredicted RBP27.04■■□□□ 1.92
SSRP1-204ENST00000529002 C5P01031 1676 aa27.03■■□□□ 1.92
SSRP1-204ENST00000529002 TAF1LQ8IZX4 1826 aa27.02■■□□□ 1.92
SSRP1-204ENST00000529002 MAP3K19Q56UN5 1328 aa27.01■■□□□ 1.91
SSRP1-204ENST00000529002 WWC3Q9ULE0 1092 aa27.01■■□□□ 1.91
SSRP1-204ENST00000529002 HOXC9P31274 260 aa27■■□□□ 1.91
SSRP1-204ENST00000529002 GPBP1L1Q9HC44 474 aaPredicted RBP27■■□□□ 1.91
SSRP1-204ENST00000529002 USP47Q96K76 1375 aa26.98■■□□□ 1.91
SSRP1-204ENST00000529002 USHBP1Q8N6Y0 703 aa26.98■■□□□ 1.91
SSRP1-204ENST00000529002 TERF2IPQ9NYB0 399 aa26.98■■□□□ 1.91
SSRP1-204ENST00000529002 AMPHP49418 695 aa26.97■■□□□ 1.91
SSRP1-204ENST00000529002 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
SSRP1-204ENST00000529002 ADCY9O60503 1353 aa26.96■■□□□ 1.91
SSRP1-204ENST00000529002 SMIM5Q71RC9 77 aa26.95■■□□□ 1.9
SSRP1-204ENST00000529002 HSPA6P17066 643 aa26.94■■□□□ 1.9
SSRP1-204ENST00000529002 NBPF6Q5VWK0 638 aa26.94■■□□□ 1.9
SSRP1-204ENST00000529002 AMIGO3Q86WK7 504 aa26.94■■□□□ 1.9
SSRP1-204ENST00000529002 NBPF4Q96M43 638 aa26.94■■□□□ 1.9
SSRP1-204ENST00000529002 CD2APQ9Y5K6 639 aa26.94■■□□□ 1.9
SSRP1-204ENST00000529002 TOGARAM1Q9Y4F4 1720 aa26.93■■□□□ 1.9
SSRP1-204ENST00000529002 COG3Q96JB2 828 aa26.92■■□□□ 1.9
SSRP1-204ENST00000529002 ITGB4P16144 1822 aa26.91■■□□□ 1.9
SSRP1-204ENST00000529002 RRS1Q15050 365 aaKnown RBP26.91■■□□□ 1.9
SSRP1-204ENST00000529002 UBR3Q6ZT12 1888 aa26.89■■□□□ 1.9
SSRP1-204ENST00000529002 C4BP0C0L5 1744 aa26.89■■□□□ 1.9
SSRP1-204ENST00000529002 PALLDQ8WX93 1383 aa26.88■■□□□ 1.89
SSRP1-204ENST00000529002 MPRIPQ6WCQ1 1025 aa26.87■■□□□ 1.89
SSRP1-204ENST00000529002 IGSF1Q8N6C5 1336 aa26.87■■□□□ 1.89
SSRP1-204ENST00000529002 PHF14O94880 888 aa26.85■■□□□ 1.89
SSRP1-204ENST00000529002 RAPGEF4Q8WZA2 1011 aa26.84■■□□□ 1.89
SSRP1-204ENST00000529002 KIF3CO14782 793 aa26.83■■□□□ 1.89
SSRP1-204ENST00000529002 FLAD1Q8NFF5 587 aa26.83■■□□□ 1.89
SSRP1-204ENST00000529002 TATP17735 454 aaPredicted RBP26.82■■□□□ 1.88
SSRP1-204ENST00000529002 AK7Q96M32 723 aa26.81■■□□□ 1.88
SSRP1-204ENST00000529002 GGNBP2Q9H3C7 697 aa26.81■■□□□ 1.88
SSRP1-204ENST00000529002 CYP27B1O15528 508 aa26.8■■□□□ 1.88
SSRP1-204ENST00000529002 PUS7Q96PZ0 661 aaKnown RBP26.8■■□□□ 1.88
SSRP1-204ENST00000529002 CGNL1Q0VF96 1302 aa26.8■■□□□ 1.88
SSRP1-204ENST00000529002 RTL1A6NKG5 1358 aa26.8■■□□□ 1.88
SSRP1-204ENST00000529002 MAP2P11137 1827 aaKnown RBP26.79■■□□□ 1.88
SSRP1-204ENST00000529002 HSP90AB2PQ58FF8 381 aa26.79■■□□□ 1.88
SSRP1-204ENST00000529002 TESK2Q96S53 571 aa26.79■■□□□ 1.88
SSRP1-204ENST00000529002 PCDH11XQ9BZA7 1347 aa26.79■■□□□ 1.88
SSRP1-204ENST00000529002 PCDH11YQ9BZA8 1340 aa26.79■■□□□ 1.88
SSRP1-204ENST00000529002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.78■■□□□ 1.88
SSRP1-204ENST00000529002 FYB1O15117 783 aa26.76■■□□□ 1.87
SSRP1-204ENST00000529002 N4BP2Q86UW6 1770 aaPredicted RBP26.76■■□□□ 1.87
SSRP1-204ENST00000529002 PIGBQ92521 554 aa26.75■■□□□ 1.87
SSRP1-204ENST00000529002 SMG6Q86US8 1419 aaKnown RBP26.74■■□□□ 1.87
SSRP1-204ENST00000529002 ST20-MTHFSA0A0A6YYL1 179 aa26.74■■□□□ 1.87
SSRP1-204ENST00000529002 LINC00116Q8NCU8 138 aa26.74■■□□□ 1.87
SSRP1-204ENST00000529002 PKD1L3Q7Z443 1732 aa26.73■■□□□ 1.87
SSRP1-204ENST00000529002 KIAA1551Q9HCM1 1747 aa26.73■■□□□ 1.87
SSRP1-204ENST00000529002 SMARCC1Q92922 1105 aaPredicted RBP26.72■■□□□ 1.87
SSRP1-204ENST00000529002 KIF20BQ96Q89 1820 aa26.72■■□□□ 1.87
SSRP1-204ENST00000529002 INSRP06213 1382 aa26.71■■□□□ 1.87
SSRP1-204ENST00000529002 CICQ96RK0 1608 aaPredicted RBP26.7■■□□□ 1.86
SSRP1-204ENST00000529002 KIF13BQ9NQT8 1826 aa26.68■■□□□ 1.86
SSRP1-204ENST00000529002 LOC102724428A0A0B4J2F2 783 aa26.68■■□□□ 1.86
SSRP1-204ENST00000529002 SSFA2P28290 1259 aa26.68■■□□□ 1.86
SSRP1-204ENST00000529002 SIK1P57059 783 aa26.68■■□□□ 1.86
SSRP1-204ENST00000529002 ITPK1Q13572 414 aa26.68■■□□□ 1.86
SSRP1-204ENST00000529002 DNAJC5GQ8N7S2 189 aa26.67■■□□□ 1.86
SSRP1-204ENST00000529002 PXDNLA1KZ92 1463 aa26.67■■□□□ 1.86
SSRP1-204ENST00000529002 GNPATO15228 680 aa26.66■■□□□ 1.86
SSRP1-204ENST00000529002 FLT4P35916 1363 aa26.66■■□□□ 1.86
SSRP1-204ENST00000529002 MMP10P09238 476 aa26.65■■□□□ 1.86
SSRP1-204ENST00000529002 HMGB2P26583 209 aaKnown RBP26.65■■□□□ 1.86
SSRP1-204ENST00000529002 APLP1P51693 650 aa26.65■■□□□ 1.86
SSRP1-204ENST00000529002 ASAP1Q9ULH1 1129 aa26.65■■□□□ 1.86
SSRP1-204ENST00000529002 EMILIN1Q9Y6C2 1016 aa26.65■■□□□ 1.86
SSRP1-204ENST00000529002 NSD3Q9BZ95 1437 aa26.65■■□□□ 1.86
SSRP1-204ENST00000529002 NMRK2Q9NPI5 230 aa26.64■■□□□ 1.86
SSRP1-204ENST00000529002 TONSLQ96HA7 1378 aa26.63■■□□□ 1.85
SSRP1-204ENST00000529002 A0A0G2JLW4 131 aa26.63■■□□□ 1.85
SSRP1-204ENST00000529002 BCS1LQ9Y276 419 aa26.63■■□□□ 1.85
SSRP1-204ENST00000529002 NKX1-1Q15270 411 aaPredicted RBP26.62■■□□□ 1.85
SSRP1-204ENST00000529002 TOMM70O94826 608 aa26.61■■□□□ 1.85
SSRP1-204ENST00000529002 ATP6V1AP38606 617 aa26.61■■□□□ 1.85
SSRP1-204ENST00000529002 WDR90Q96KV7 1748 aa26.61■■□□□ 1.85
SSRP1-204ENST00000529002 BRCA1P38398 1863 aaKnown RBP26.6■■□□□ 1.85
SSRP1-204ENST00000529002 HTRA3P83110 453 aa26.6■■□□□ 1.85
SSRP1-204ENST00000529002 ARHGAP27Q6ZUM4 889 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms