RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 DOT1LQ8TEK3 1739 aa20.25■□□□□ 0.83
CCDC18-210ENST00000528942 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
CCDC18-210ENST00000528942 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
CCDC18-210ENST00000528942 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
CCDC18-210ENST00000528942 EYA1Q99502 592 aa20.24■□□□□ 0.83
CCDC18-210ENST00000528942 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
CCDC18-210ENST00000528942 NUP188Q5SRE5 1749 aa20.23■□□□□ 0.83
CCDC18-210ENST00000528942 DDX54Q8TDD1 881 aaKnown RBP20.23■□□□□ 0.83
CCDC18-210ENST00000528942 IGSF1Q8N6C5 1336 aa20.23■□□□□ 0.83
CCDC18-210ENST00000528942 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
CCDC18-210ENST00000528942 CNGB1Q14028 1251 aaPredicted RBP20.22■□□□□ 0.83
CCDC18-210ENST00000528942 BTAF1O14981 1849 aa20.22■□□□□ 0.83
CCDC18-210ENST00000528942 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
CCDC18-210ENST00000528942 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
CCDC18-210ENST00000528942 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
CCDC18-210ENST00000528942 MTHFSP49914 203 aa20.2■□□□□ 0.82
CCDC18-210ENST00000528942 EZH2Q15910 746 aaKnown RBP20.2■□□□□ 0.82
CCDC18-210ENST00000528942 PTF1AQ7RTS3 328 aa20.18■□□□□ 0.82
CCDC18-210ENST00000528942 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
CCDC18-210ENST00000528942 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
CCDC18-210ENST00000528942 KCNQ2O43526 872 aa20.17■□□□□ 0.82
CCDC18-210ENST00000528942 SRCAPQ6ZRS2 3230 aa20.17■□□□□ 0.82
CCDC18-210ENST00000528942 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
CCDC18-210ENST00000528942 PLSCR1O15162 318 aa20.16■□□□□ 0.82
CCDC18-210ENST00000528942 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
CCDC18-210ENST00000528942 IL13P35225 146 aa20.15■□□□□ 0.82
CCDC18-210ENST00000528942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC18-210ENST00000528942 TOGARAM1Q9Y4F4 1720 aa20.15■□□□□ 0.82
CCDC18-210ENST00000528942 KDRP35968 1356 aa20.14■□□□□ 0.81
CCDC18-210ENST00000528942 CYP27B1O15528 508 aa20.13■□□□□ 0.81
CCDC18-210ENST00000528942 DIAPH1O60610 1272 aaKnown RBP20.12■□□□□ 0.81
CCDC18-210ENST00000528942 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
CCDC18-210ENST00000528942 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
CCDC18-210ENST00000528942 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
CCDC18-210ENST00000528942 ITGB4P16144 1822 aa20.11■□□□□ 0.81
CCDC18-210ENST00000528942 PRIM1P49642 420 aaKnown RBP20.1■□□□□ 0.81
CCDC18-210ENST00000528942 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
CCDC18-210ENST00000528942 LY75O60449 1722 aa20.08■□□□□ 0.81
CCDC18-210ENST00000528942 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
CCDC18-210ENST00000528942 PHKG2P15735 406 aa20.07■□□□□ 0.8
CCDC18-210ENST00000528942 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
CCDC18-210ENST00000528942 NKX1-1Q15270 411 aaPredicted RBP20.07■□□□□ 0.8
CCDC18-210ENST00000528942 AMOTQ4VCS5 1084 aa20.07■□□□□ 0.8
CCDC18-210ENST00000528942 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
CCDC18-210ENST00000528942 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
CCDC18-210ENST00000528942 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
CCDC18-210ENST00000528942 PAPPAQ13219 1627 aa20.06■□□□□ 0.8
CCDC18-210ENST00000528942 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
CCDC18-210ENST00000528942 TXNRD1Q16881 649 aa20.06■□□□□ 0.8
CCDC18-210ENST00000528942 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
CCDC18-210ENST00000528942 HMOX1P09601 288 aa20.04■□□□□ 0.8
CCDC18-210ENST00000528942 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
CCDC18-210ENST00000528942 PROM2Q8N271 834 aa20.04■□□□□ 0.8
CCDC18-210ENST00000528942 U2SURPO15042 1029 aaKnown RBP20.03■□□□□ 0.8
CCDC18-210ENST00000528942 LRP5O75197 1615 aa20.02■□□□□ 0.8
CCDC18-210ENST00000528942 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.8
CCDC18-210ENST00000528942 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
CCDC18-210ENST00000528942 SLC27A3Q5K4L6 730 aa20.01■□□□□ 0.79
CCDC18-210ENST00000528942 MPRIPQ6WCQ1 1025 aa20.01■□□□□ 0.79
CCDC18-210ENST00000528942 DCAF5Q96JK2 942 aa20.01■□□□□ 0.79
CCDC18-210ENST00000528942 ANO8Q9HCE9 1232 aaPredicted RBP20.01■□□□□ 0.79
CCDC18-210ENST00000528942 KDM6AO15550 1401 aaPredicted RBP20.01■□□□□ 0.79
CCDC18-210ENST00000528942 NUDCQ9Y266 331 aa20■□□□□ 0.79
CCDC18-210ENST00000528942 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
CCDC18-210ENST00000528942 C5P01031 1676 aa20■□□□□ 0.79
CCDC18-210ENST00000528942 PALLDQ8WX93 1383 aa19.99■□□□□ 0.79
CCDC18-210ENST00000528942 RALBP1Q15311 655 aa19.99■□□□□ 0.79
CCDC18-210ENST00000528942 TMOD3Q9NYL9 352 aa19.99■□□□□ 0.79
CCDC18-210ENST00000528942 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
CCDC18-210ENST00000528942 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
CCDC18-210ENST00000528942 PIGBQ92521 554 aa19.97■□□□□ 0.79
CCDC18-210ENST00000528942 LRRC4BQ9NT99 713 aa19.97■□□□□ 0.79
CCDC18-210ENST00000528942 STK32BQ9NY57 414 aa19.97■□□□□ 0.79
CCDC18-210ENST00000528942 ERVV-2B6SEH9 535 aa19.96■□□□□ 0.79
CCDC18-210ENST00000528942 SMARCC1Q92922 1105 aaPredicted RBP19.96■□□□□ 0.79
CCDC18-210ENST00000528942 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
CCDC18-210ENST00000528942 QSER1Q2KHR3 1735 aa19.96■□□□□ 0.79
CCDC18-210ENST00000528942 TAF1LQ8IZX4 1826 aa19.95■□□□□ 0.78
CCDC18-210ENST00000528942 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
CCDC18-210ENST00000528942 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
CCDC18-210ENST00000528942 MRC1P22897 1456 aa19.94■□□□□ 0.78
CCDC18-210ENST00000528942 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
CCDC18-210ENST00000528942 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCDC18-210ENST00000528942 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
CCDC18-210ENST00000528942 TUBGCP6Q96RT7 1819 aa19.94■□□□□ 0.78
CCDC18-210ENST00000528942 MTHFSDQ2M296 383 aaKnown RBP19.93■□□□□ 0.78
CCDC18-210ENST00000528942 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
CCDC18-210ENST00000528942 MYBBP1AQ9BQG0 1328 aaKnown RBP19.93■□□□□ 0.78
CCDC18-210ENST00000528942 PRKAR2BP31323 418 aa19.92■□□□□ 0.78
CCDC18-210ENST00000528942 CABP4P57796 275 aa19.92■□□□□ 0.78
CCDC18-210ENST00000528942 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
CCDC18-210ENST00000528942 ZNF316A6NFI3 1004 aaPredicted RBP19.91■□□□□ 0.78
CCDC18-210ENST00000528942 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
CCDC18-210ENST00000528942 KCNQ4P56696 695 aa19.91■□□□□ 0.78
CCDC18-210ENST00000528942 MAP3K5Q99683 1374 aa19.91■□□□□ 0.78
CCDC18-210ENST00000528942 C4BP0C0L5 1744 aa19.9■□□□□ 0.78
CCDC18-210ENST00000528942 ZNF827Q17R98 1081 aa19.9■□□□□ 0.78
CCDC18-210ENST00000528942 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
CCDC18-210ENST00000528942 ASAP1Q9ULH1 1129 aa19.9■□□□□ 0.78
CCDC18-210ENST00000528942 FCHSD2O94868 740 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms