RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-211ENST00000528840 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
PTP4A2-211ENST00000528840 GPR162Q16538 588 aa15.95■□□□□ 0.14
PTP4A2-211ENST00000528840 SLC16A10Q8TF71 515 aa15.95■□□□□ 0.14
PTP4A2-211ENST00000528840 GGNBP2Q9H3C7 697 aa15.95■□□□□ 0.14
PTP4A2-211ENST00000528840 BTAF1O14981 1849 aa15.95■□□□□ 0.14
PTP4A2-211ENST00000528840 FYB1O15117 783 aa15.94■□□□□ 0.14
PTP4A2-211ENST00000528840 POLD1P28340 1107 aa15.94■□□□□ 0.14
PTP4A2-211ENST00000528840 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
PTP4A2-211ENST00000528840 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
PTP4A2-211ENST00000528840 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
PTP4A2-211ENST00000528840 PNPLA7Q6ZV29 1317 aa15.93■□□□□ 0.14
PTP4A2-211ENST00000528840 ANKRD36BQ8N2N9 1353 aa15.92■□□□□ 0.14
PTP4A2-211ENST00000528840 TMF1P82094 1093 aa15.92■□□□□ 0.14
PTP4A2-211ENST00000528840 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
PTP4A2-211ENST00000528840 RAPGEF4Q8WZA2 1011 aa15.91■□□□□ 0.14
PTP4A2-211ENST00000528840 CCNL1Q9UK58 526 aaPredicted RBP15.91■□□□□ 0.14
PTP4A2-211ENST00000528840 HSP90AB2PQ58FF8 381 aa15.9■□□□□ 0.14
PTP4A2-211ENST00000528840 PAPPAQ13219 1627 aa15.9■□□□□ 0.14
PTP4A2-211ENST00000528840 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
PTP4A2-211ENST00000528840 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
PTP4A2-211ENST00000528840 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
PTP4A2-211ENST00000528840 NSD2O96028 1365 aa15.87■□□□□ 0.13
PTP4A2-211ENST00000528840 USP47Q96K76 1375 aa15.87■□□□□ 0.13
PTP4A2-211ENST00000528840 MAP3K5Q99683 1374 aa15.87■□□□□ 0.13
PTP4A2-211ENST00000528840 MEGF6O75095 1541 aa15.87■□□□□ 0.13
PTP4A2-211ENST00000528840 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
PTP4A2-211ENST00000528840 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
PTP4A2-211ENST00000528840 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
PTP4A2-211ENST00000528840 NLGN2Q8NFZ4 835 aa15.86■□□□□ 0.13
PTP4A2-211ENST00000528840 CDCA8Q53HL2 280 aa15.85■□□□□ 0.13
PTP4A2-211ENST00000528840 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
PTP4A2-211ENST00000528840 FAM208AQ9UK61 1670 aaKnown RBP15.85■□□□□ 0.13
PTP4A2-211ENST00000528840 PPM1GO15355 546 aaPredicted RBP15.84■□□□□ 0.13
PTP4A2-211ENST00000528840 MSL1Q68DK7 614 aa15.84■□□□□ 0.13
PTP4A2-211ENST00000528840 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
PTP4A2-211ENST00000528840 C1QTNF8P60827 252 aa15.83■□□□□ 0.12
PTP4A2-211ENST00000528840 INSRP06213 1382 aa15.83■□□□□ 0.12
PTP4A2-211ENST00000528840 SMG6Q86US8 1419 aaKnown RBP15.83■□□□□ 0.12
PTP4A2-211ENST00000528840 CYP27B1O15528 508 aa15.82■□□□□ 0.12
PTP4A2-211ENST00000528840 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
PTP4A2-211ENST00000528840 CHD4Q14839 1912 aa15.82■□□□□ 0.12
PTP4A2-211ENST00000528840 SENP3-EIF4A1A0A087X0R7 540 aa15.81■□□□□ 0.12
PTP4A2-211ENST00000528840 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
PTP4A2-211ENST00000528840 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
PTP4A2-211ENST00000528840 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
PTP4A2-211ENST00000528840 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTP4A2-211ENST00000528840 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
PTP4A2-211ENST00000528840 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
PTP4A2-211ENST00000528840 TRIM26Q12899 539 aaPredicted RBP15.8■□□□□ 0.12
PTP4A2-211ENST00000528840 LY75O60449 1722 aa15.8■□□□□ 0.12
PTP4A2-211ENST00000528840 FLT4P35916 1363 aa15.79■□□□□ 0.12
PTP4A2-211ENST00000528840 GRIN3BO60391 1043 aa15.79■□□□□ 0.12
PTP4A2-211ENST00000528840 FLAD1Q8NFF5 587 aa15.79■□□□□ 0.12
PTP4A2-211ENST00000528840 SMARCC1Q92922 1105 aaPredicted RBP15.79■□□□□ 0.12
PTP4A2-211ENST00000528840 QSER1Q2KHR3 1735 aa15.79■□□□□ 0.12
PTP4A2-211ENST00000528840 SHANK3Q9BYB0 1731 aa15.79■□□□□ 0.12
PTP4A2-211ENST00000528840 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
PTP4A2-211ENST00000528840 UTRNP46939 3433 aa15.78■□□□□ 0.12
PTP4A2-211ENST00000528840 SMIM5Q71RC9 77 aa15.78■□□□□ 0.12
PTP4A2-211ENST00000528840 PIGBQ92521 554 aa15.78■□□□□ 0.12
PTP4A2-211ENST00000528840 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
PTP4A2-211ENST00000528840 SPG7Q9UQ90 795 aa15.78■□□□□ 0.12
PTP4A2-211ENST00000528840 KCNA4P22459 653 aa15.77■□□□□ 0.12
PTP4A2-211ENST00000528840 AK7Q96M32 723 aa15.77■□□□□ 0.12
PTP4A2-211ENST00000528840 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
PTP4A2-211ENST00000528840 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
PTP4A2-211ENST00000528840 KIF24Q5T7B8 1368 aa15.76■□□□□ 0.11
PTP4A2-211ENST00000528840 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
PTP4A2-211ENST00000528840 CD2APQ9Y5K6 639 aa15.76■□□□□ 0.11
PTP4A2-211ENST00000528840 COL24A1Q17RW2 1714 aa15.75■□□□□ 0.11
PTP4A2-211ENST00000528840 PHF14O94880 888 aa15.75■□□□□ 0.11
PTP4A2-211ENST00000528840 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
PTP4A2-211ENST00000528840 EYA1Q99502 592 aa15.75■□□□□ 0.11
PTP4A2-211ENST00000528840 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
PTP4A2-211ENST00000528840 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
PTP4A2-211ENST00000528840 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
PTP4A2-211ENST00000528840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
PTP4A2-211ENST00000528840 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
PTP4A2-211ENST00000528840 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
PTP4A2-211ENST00000528840 POLKQ9UBT6 870 aa15.73■□□□□ 0.11
PTP4A2-211ENST00000528840 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
PTP4A2-211ENST00000528840 SIK1P57059 783 aa15.72■□□□□ 0.11
PTP4A2-211ENST00000528840 ASAP1Q9ULH1 1129 aa15.72■□□□□ 0.11
PTP4A2-211ENST00000528840 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
PTP4A2-211ENST00000528840 ATP6V1AP38606 617 aa15.71■□□□□ 0.11
PTP4A2-211ENST00000528840 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
PTP4A2-211ENST00000528840 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
PTP4A2-211ENST00000528840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTP4A2-211ENST00000528840 WWC3Q9ULE0 1092 aa15.71■□□□□ 0.11
PTP4A2-211ENST00000528840 KIF20BQ96Q89 1820 aa15.71■□□□□ 0.1
PTP4A2-211ENST00000528840 PHKG2P15735 406 aa15.7■□□□□ 0.1
PTP4A2-211ENST00000528840 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
PTP4A2-211ENST00000528840 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
PTP4A2-211ENST00000528840 ITPK1Q13572 414 aa15.69■□□□□ 0.1
PTP4A2-211ENST00000528840 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
PTP4A2-211ENST00000528840 C5P01031 1676 aa15.69■□□□□ 0.1
PTP4A2-211ENST00000528840 GNPATO15228 680 aa15.68■□□□□ 0.1
PTP4A2-211ENST00000528840 SSFA2P28290 1259 aa15.68■□□□□ 0.1
PTP4A2-211ENST00000528840 EIF4A2Q14240 407 aaKnown RBP15.68■□□□□ 0.1
PTP4A2-211ENST00000528840 ITGB4P16144 1822 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms