RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
CMTM1-210ENST00000528441 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
CMTM1-210ENST00000528441 PANK3Q9H999 370 aa12.44□□□□□ -0.42
CMTM1-210ENST00000528441 FLT4P35916 1363 aa12.43□□□□□ -0.42
CMTM1-210ENST00000528441 R3HDM1Q15032 1099 aaKnown RBP12.43□□□□□ -0.42
CMTM1-210ENST00000528441 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
CMTM1-210ENST00000528441 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
CMTM1-210ENST00000528441 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
CMTM1-210ENST00000528441 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-210ENST00000528441 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-210ENST00000528441 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
CMTM1-210ENST00000528441 RGPD2P0DJD1 1756 aa12.42□□□□□ -0.42
CMTM1-210ENST00000528441 DISP2A7MBM2 1401 aa12.42□□□□□ -0.42
CMTM1-210ENST00000528441 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
CMTM1-210ENST00000528441 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
CMTM1-210ENST00000528441 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
CMTM1-210ENST00000528441 SBF2Q86WG5 1849 aa12.4□□□□□ -0.42
CMTM1-210ENST00000528441 POTEHQ6S545 545 aa12.4□□□□□ -0.42
CMTM1-210ENST00000528441 ANKRD26Q9UPS8 1709 aa12.4□□□□□ -0.43
CMTM1-210ENST00000528441 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
CMTM1-210ENST00000528441 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
CMTM1-210ENST00000528441 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
CMTM1-210ENST00000528441 INSRP06213 1382 aa12.39□□□□□ -0.43
CMTM1-210ENST00000528441 PEAK1Q9H792 1746 aa12.39□□□□□ -0.43
CMTM1-210ENST00000528441 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
CMTM1-210ENST00000528441 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
CMTM1-210ENST00000528441 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
CMTM1-210ENST00000528441 NSD2O96028 1365 aa12.37□□□□□ -0.43
CMTM1-210ENST00000528441 KIF24Q5T7B8 1368 aa12.37□□□□□ -0.43
CMTM1-210ENST00000528441 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
CMTM1-210ENST00000528441 NHSQ6T4R5 1651 aa12.36□□□□□ -0.43
CMTM1-210ENST00000528441 RREB1Q92766 1687 aa12.36□□□□□ -0.43
CMTM1-210ENST00000528441 KCNQ2O43526 872 aa12.36□□□□□ -0.43
CMTM1-210ENST00000528441 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
CMTM1-210ENST00000528441 MEGF6O75095 1541 aa12.36□□□□□ -0.43
CMTM1-210ENST00000528441 PTF1AQ7RTS3 328 aa12.35□□□□□ -0.43
CMTM1-210ENST00000528441 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-210ENST00000528441 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
CMTM1-210ENST00000528441 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
CMTM1-210ENST00000528441 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
CMTM1-210ENST00000528441 PLSCR1O15162 318 aa12.34□□□□□ -0.43
CMTM1-210ENST00000528441 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
CMTM1-210ENST00000528441 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
CMTM1-210ENST00000528441 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
CMTM1-210ENST00000528441 BTAF1O14981 1849 aa12.33□□□□□ -0.44
CMTM1-210ENST00000528441 POLKQ9UBT6 870 aa12.33□□□□□ -0.44
CMTM1-210ENST00000528441 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
CMTM1-210ENST00000528441 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.44
CMTM1-210ENST00000528441 RGPD3A6NKT7 1758 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-210ENST00000528441 RGPD4Q7Z3J3 1758 aa12.33□□□□□ -0.44
CMTM1-210ENST00000528441 BCL9O00512 1426 aa12.32□□□□□ -0.44
CMTM1-210ENST00000528441 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
CMTM1-210ENST00000528441 EIF4A2Q14240 407 aaKnown RBP12.31□□□□□ -0.44
CMTM1-210ENST00000528441 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
CMTM1-210ENST00000528441 EYA1Q99502 592 aa12.3□□□□□ -0.44
CMTM1-210ENST00000528441 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
CMTM1-210ENST00000528441 SHANK3Q9BYB0 1731 aa12.28□□□□□ -0.44
CMTM1-210ENST00000528441 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
CMTM1-210ENST00000528441 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
CMTM1-210ENST00000528441 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
CMTM1-210ENST00000528441 LRP5O75197 1615 aa12.28□□□□□ -0.44
CMTM1-210ENST00000528441 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
CMTM1-210ENST00000528441 SLC15A2Q16348 729 aa12.27□□□□□ -0.45
CMTM1-210ENST00000528441 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
CMTM1-210ENST00000528441 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
CMTM1-210ENST00000528441 SLC27A3Q5K4L6 730 aa12.26□□□□□ -0.45
CMTM1-210ENST00000528441 IFNL2Q8IZJ0 200 aa12.26□□□□□ -0.45
CMTM1-210ENST00000528441 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CMTM1-210ENST00000528441 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
CMTM1-210ENST00000528441 MTHFSP49914 203 aa12.25□□□□□ -0.45
CMTM1-210ENST00000528441 KCNQ4P56696 695 aa12.25□□□□□ -0.45
CMTM1-210ENST00000528441 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-210ENST00000528441 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
CMTM1-210ENST00000528441 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-210ENST00000528441 PROM2Q8N271 834 aa12.25□□□□□ -0.45
CMTM1-210ENST00000528441 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
CMTM1-210ENST00000528441 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
CMTM1-210ENST00000528441 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
CMTM1-210ENST00000528441 CYP27B1O15528 508 aa12.24□□□□□ -0.45
CMTM1-210ENST00000528441 CFAP53Q96M91 514 aa12.24□□□□□ -0.45
CMTM1-210ENST00000528441 PALLDQ8WX93 1383 aa12.23□□□□□ -0.45
CMTM1-210ENST00000528441 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
CMTM1-210ENST00000528441 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
CMTM1-210ENST00000528441 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
CMTM1-210ENST00000528441 HMOX1P09601 288 aa12.23□□□□□ -0.45
CMTM1-210ENST00000528441 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
CMTM1-210ENST00000528441 PHKG2P15735 406 aa12.22□□□□□ -0.45
CMTM1-210ENST00000528441 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
CMTM1-210ENST00000528441 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
CMTM1-210ENST00000528441 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
CMTM1-210ENST00000528441 ITGB4P16144 1822 aa12.22□□□□□ -0.45
CMTM1-210ENST00000528441 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
CMTM1-210ENST00000528441 AK7Q96M32 723 aa12.21□□□□□ -0.45
CMTM1-210ENST00000528441 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
CMTM1-210ENST00000528441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
CMTM1-210ENST00000528441 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
CMTM1-210ENST00000528441 POLD1P28340 1107 aa12.2□□□□□ -0.46
CMTM1-210ENST00000528441 CABP4P57796 275 aa12.2□□□□□ -0.46
CMTM1-210ENST00000528441 PDGFDQ9GZP0 370 aaPredicted RBP12.2□□□□□ -0.46
CMTM1-210ENST00000528441 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms