RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	EYA1	Q99502	592 aa		16.1	■□□□□ 0.17
PSMC3-205	ENST00000528362	LRP5	O75197	1615 aa		16.09	■□□□□ 0.17
PSMC3-205	ENST00000528362	PER1	O15534	1290 aa	Predicted RBP	16.09	■□□□□ 0.17
PSMC3-205	ENST00000528362	TAT	P17735	454 aa	Predicted RBP	16.09	■□□□□ 0.17
PSMC3-205	ENST00000528362	EIF4A2	Q14240	407 aa	Known RBP	16.09	■□□□□ 0.17
PSMC3-205	ENST00000528362	RREB1	Q92766	1687 aa		16.08	■□□□□ 0.17
PSMC3-205	ENST00000528362	TXNRD1	Q16881	649 aa		16.07	■□□□□ 0.16
PSMC3-205	ENST00000528362	ANO8	Q9HCE9	1232 aa	Predicted RBP	16.07	■□□□□ 0.16
PSMC3-205	ENST00000528362	NHS	Q6T4R5	1651 aa		16.07	■□□□□ 0.16
PSMC3-205	ENST00000528362	RGPD2	P0DJD1	1756 aa		16.07	■□□□□ 0.16
PSMC3-205	ENST00000528362	SBF2	Q86WG5	1849 aa		16.07	■□□□□ 0.16
PSMC3-205	ENST00000528362	NUP188	Q5SRE5	1749 aa		16.06	■□□□□ 0.16
PSMC3-205	ENST00000528362	NBPF14	Q5TI25	921 aa		16.06	■□□□□ 0.16
PSMC3-205	ENST00000528362	PCDH11X	Q9BZA7	1347 aa		16.05	■□□□□ 0.16
PSMC3-205	ENST00000528362	PCDH11Y	Q9BZA8	1340 aa		16.05	■□□□□ 0.16
PSMC3-205	ENST00000528362	PRIM1	P49642	420 aa	Known RBP	16.05	■□□□□ 0.16
PSMC3-205	ENST00000528362	RGPD3	A6NKT7	1758 aa	Predicted RBP	16.05	■□□□□ 0.16
PSMC3-205	ENST00000528362	RGPD4	Q7Z3J3	1758 aa		16.05	■□□□□ 0.16
PSMC3-205	ENST00000528362	IGSF1	Q8N6C5	1336 aa		16.04	■□□□□ 0.16
PSMC3-205	ENST00000528362	CYP27B1	O15528	508 aa		16.04	■□□□□ 0.16
PSMC3-205	ENST00000528362	CC2D1B	Q5T0F9	858 aa	Known RBP	16.04	■□□□□ 0.16
PSMC3-205	ENST00000528362	SYTL4	Q96C24	671 aa	Predicted RBP	16.03	■□□□□ 0.16
PSMC3-205	ENST00000528362	SHANK3	Q9BYB0	1731 aa		16.02	■□□□□ 0.16
PSMC3-205	ENST00000528362	NPC1L1	Q9UHC9	1359 aa		16.02	■□□□□ 0.16
PSMC3-205	ENST00000528362	LRRC4B	Q9NT99	713 aa		16	■□□□□ 0.15
PSMC3-205	ENST00000528362	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	16	■□□□□ 0.15	3e-6	■□□□□ 9.1
PSMC3-205	ENST00000528362	SPG7	Q9UQ90	795 aa		16	■□□□□ 0.15
PSMC3-205	ENST00000528362	MAP2	P11137	1827 aa	Known RBP	15.99	■□□□□ 0.15
PSMC3-205	ENST00000528362	IL13	P35225	146 aa		15.99	■□□□□ 0.15
PSMC3-205	ENST00000528362	MTHFS	P49914	203 aa		15.99	■□□□□ 0.15
PSMC3-205	ENST00000528362	NKX1-1	Q15270	411 aa	Predicted RBP	15.99	■□□□□ 0.15
PSMC3-205	ENST00000528362	PLEKHG2	Q9H7P9	1386 aa		15.99	■□□□□ 0.15
PSMC3-205	ENST00000528362	AEBP1	Q8IUX7	1158 aa		15.98	■□□□□ 0.15
PSMC3-205	ENST00000528362	STK32B	Q9NY57	414 aa		15.98	■□□□□ 0.15
PSMC3-205	ENST00000528362	PKD1L3	Q7Z443	1732 aa		15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	DOT1L	Q8TEK3	1739 aa		15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	BTAF1	O14981	1849 aa		15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	CNGB1	Q14028	1251 aa	Predicted RBP	15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	SLC15A2	Q16348	729 aa		15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	SLC27A3	Q5K4L6	730 aa		15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	PDGFD	Q9GZP0	370 aa	Predicted RBP	15.97	■□□□□ 0.15
PSMC3-205	ENST00000528362	PHKG2	P15735	406 aa		15.96	■□□□□ 0.15
PSMC3-205	ENST00000528362	ZNF827	Q17R98	1081 aa		15.96	■□□□□ 0.15
PSMC3-205	ENST00000528362	PAPPA	Q13219	1627 aa		15.95	■□□□□ 0.14
PSMC3-205	ENST00000528362	KCNQ4	P56696	695 aa		15.95	■□□□□ 0.14
PSMC3-205	ENST00000528362	SULT6B1	Q6IMI4	303 aa		15.95	■□□□□ 0.14
PSMC3-205	ENST00000528362	IFNL2	Q8IZJ0	200 aa		15.95	■□□□□ 0.14
PSMC3-205	ENST00000528362	KDR	P35968	1356 aa		15.95	■□□□□ 0.14
PSMC3-205	ENST00000528362	MPRIP	Q6WCQ1	1025 aa		15.94	■□□□□ 0.14
PSMC3-205	ENST00000528362	PIGB	Q92521	554 aa		15.93	■□□□□ 0.14
PSMC3-205	ENST00000528362	AKT1S1	Q96B36	256 aa		15.93	■□□□□ 0.14
PSMC3-205	ENST00000528362	PALLD	Q8WX93	1383 aa		15.92	■□□□□ 0.14
PSMC3-205	ENST00000528362	AMOT	Q4VCS5	1084 aa		15.92	■□□□□ 0.14
PSMC3-205	ENST00000528362	PLEKHO1	Q53GL0	409 aa	Predicted RBP	15.92	■□□□□ 0.14
PSMC3-205	ENST00000528362	ZNF530	Q6P9A1	599 aa	Predicted RBP	15.92	■□□□□ 0.14
PSMC3-205	ENST00000528362	SPON1	Q9HCB6	807 aa		15.92	■□□□□ 0.14
PSMC3-205	ENST00000528362	CCNL1	Q9UK58	526 aa	Predicted RBP	15.92	■□□□□ 0.14
PSMC3-205	ENST00000528362	COL3A1	P02461	1466 aa	Predicted RBP	15.91	■□□□□ 0.14
PSMC3-205	ENST00000528362	TOGARAM1	Q9Y4F4	1720 aa		15.91	■□□□□ 0.14
PSMC3-205	ENST00000528362	DIAPH1	O60610	1272 aa	Known RBP	15.91	■□□□□ 0.14
PSMC3-205	ENST00000528362	ZBTB7A	O95365	584 aa		15.9	■□□□□ 0.14
PSMC3-205	ENST00000528362	KDM6A	O15550	1401 aa	Predicted RBP	15.89	■□□□□ 0.13
PSMC3-205	ENST00000528362	HMOX1	P09601	288 aa		15.89	■□□□□ 0.13
PSMC3-205	ENST00000528362	TMOD3	Q9NYL9	352 aa		15.89	■□□□□ 0.13
PSMC3-205	ENST00000528362	CASZ1	Q86V15	1759 aa		15.89	■□□□□ 0.13
PSMC3-205	ENST00000528362	HSP90AB1	P08238	724 aa	Known RBP	15.88	■□□□□ 0.13
PSMC3-205	ENST00000528362	SMARCC1	Q92922	1105 aa	Predicted RBP	15.88	■□□□□ 0.13
PSMC3-205	ENST00000528362	DCAF5	Q96JK2	942 aa		15.88	■□□□□ 0.13
PSMC3-205	ENST00000528362	C1orf141	Q5JVX7	400 aa		15.87	■□□□□ 0.13
PSMC3-205	ENST00000528362	ASAP1	Q9ULH1	1129 aa		15.87	■□□□□ 0.13
PSMC3-205	ENST00000528362	PNPLA7	Q6ZV29	1317 aa		15.87	■□□□□ 0.13
PSMC3-205	ENST00000528362	ERVV-2	B6SEH9	535 aa		15.86	■□□□□ 0.13
PSMC3-205	ENST00000528362	PPP2R1A	P30153	589 aa		15.86	■□□□□ 0.13
PSMC3-205	ENST00000528362	PTGER2	P43116	358 aa		15.86	■□□□□ 0.13
PSMC3-205	ENST00000528362	MTFR1L	Q9H019	292 aa		15.86	■□□□□ 0.13
PSMC3-205	ENST00000528362	TFCP2L1	Q9NZI6	479 aa		15.86	■□□□□ 0.13
PSMC3-205	ENST00000528362	ATF5	Q9Y2D1	282 aa	Predicted RBP	15.86	■□□□□ 0.13
PSMC3-205	ENST00000528362	LY75	O60449	1722 aa		15.85	■□□□□ 0.13
PSMC3-205	ENST00000528362	ATG3	Q9NT62	314 aa		15.85	■□□□□ 0.13
PSMC3-205	ENST00000528362	KAT6B	Q8WYB5	2073 aa		15.84	■□□□□ 0.13
PSMC3-205	ENST00000528362	LOC102724428	A0A0B4J2F2	783 aa		15.84	■□□□□ 0.13
PSMC3-205	ENST00000528362	U2SURP	O15042	1029 aa	Known RBP	15.84	■□□□□ 0.13
PSMC3-205	ENST00000528362	SIK1	P57059	783 aa		15.84	■□□□□ 0.13
PSMC3-205	ENST00000528362	SGIP1	Q9BQI5	828 aa		15.84	■□□□□ 0.13
PSMC3-205	ENST00000528362	PPP1R1B	Q9UD71	204 aa	Predicted RBP	15.84	■□□□□ 0.13
PSMC3-205	ENST00000528362	AKAP4	Q5JQC9	854 aa		15.83	■□□□□ 0.12
PSMC3-205	ENST00000528362	CFAP53	Q96M91	514 aa		15.83	■□□□□ 0.12
PSMC3-205	ENST00000528362	CABP4	P57796	275 aa		15.82	■□□□□ 0.12
PSMC3-205	ENST00000528362	MTHFSD	Q2M296	383 aa	Known RBP	15.82	■□□□□ 0.12
PSMC3-205	ENST00000528362	ITPK1	Q13572	414 aa		15.81	■□□□□ 0.12
PSMC3-205	ENST00000528362	AMIGO3	Q86WK7	504 aa		15.81	■□□□□ 0.12
PSMC3-205	ENST00000528362	LINC00116	Q8NCU8	138 aa		15.81	■□□□□ 0.12
PSMC3-205	ENST00000528362	COL23A1	Q86Y22	540 aa	Predicted RBP	15.8	■□□□□ 0.12
PSMC3-205	ENST00000528362	SLC16A10	Q8TF71	515 aa		15.8	■□□□□ 0.12
PSMC3-205	ENST00000528362	SLC4A9	Q96Q91	983 aa		15.8	■□□□□ 0.12
PSMC3-205	ENST00000528362	HMGB2	P26583	209 aa	Known RBP	15.79	■□□□□ 0.12
PSMC3-205	ENST00000528362	NFATC2IP	Q8NCF5	419 aa		15.79	■□□□□ 0.12
PSMC3-205	ENST00000528362	AK7	Q96M32	723 aa		15.79	■□□□□ 0.12
PSMC3-205	ENST00000528362	LGR6	Q9HBX8	967 aa		15.79	■□□□□ 0.12
PSMC3-205	ENST00000528362	ITGB4	P16144	1822 aa		15.79	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms