RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 UPF3BQ9BZI7 483 aaKnown RBP12.12□□□□□ -0.47
SF3B2-206ENST00000528302 ZBTB22O15209 634 aa12.12□□□□□ -0.47
SF3B2-206ENST00000528302 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
SF3B2-206ENST00000528302 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
SF3B2-206ENST00000528302 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
SF3B2-206ENST00000528302 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
SF3B2-206ENST00000528302 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
SF3B2-206ENST00000528302 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
SF3B2-206ENST00000528302 DIP2CQ9Y2E4 1556 aa12.11□□□□□ -0.47
SF3B2-206ENST00000528302 TTC22Q5TAA0 569 aa12.11□□□□□ -0.47
SF3B2-206ENST00000528302 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 CCDC173Q0VFZ6 552 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.1□□□□□ -0.47
SF3B2-206ENST00000528302 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
SF3B2-206ENST00000528302 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 FOXO3O43524 673 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 ZSCAN30Q86W11 494 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 GPT2Q8TD30 523 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 ZNF830Q96NB3 372 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-206ENST00000528302 NRXN1Q9ULB1 1477 aa12.1□□□□□ -0.47
SF3B2-206ENST00000528302 DNTTIP2Q5QJE6 756 aaKnown RBP12.1□□□□□ -0.47
SF3B2-206ENST00000528302 YTHDC2Q9H6S0 1430 aaKnown RBP12.09□□□□□ -0.47
SF3B2-206ENST00000528302 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 RABEP1Q15276 862 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
SF3B2-206ENST00000528302 ANO2Q9NQ90 1003 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 KIAA1210Q9ULL0 1709 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 IL16Q14005 1332 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 ST18O60284 1047 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 G2E3Q7L622 706 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 TSC1Q92574 1164 aa12.09□□□□□ -0.47
SF3B2-206ENST00000528302 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
SF3B2-206ENST00000528302 NUTM2GQ5VZR2 741 aa12.08□□□□□ -0.47
SF3B2-206ENST00000528302 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.47
SF3B2-206ENST00000528302 RRP9O43818 475 aaKnown RBP12.08□□□□□ -0.48
SF3B2-206ENST00000528302 CASC1Q6TDU7 716 aa12.08□□□□□ -0.48
SF3B2-206ENST00000528302 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
SF3B2-206ENST00000528302 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SF3B2-206ENST00000528302 PIK3C2BO00750 1634 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 LMTK2Q8IWU2 1503 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 IFT57Q9NWB7 429 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 ZDHHC9Q9Y397 364 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 NSD2O96028 1365 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
SF3B2-206ENST00000528302 NUCB2P80303 420 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 CEP85Q6P2H3 762 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 C17orf53Q8N3J3 647 aaPredicted RBP12.06□□□□□ -0.48
SF3B2-206ENST00000528302 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 IL13P35225 146 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 PRDM10Q9NQV6 1147 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 PALD1Q9ULE6 856 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
SF3B2-206ENST00000528302 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
SF3B2-206ENST00000528302 ARHGEF28Q8N1W1 1705 aaKnown RBP12.05□□□□□ -0.48
SF3B2-206ENST00000528302 MSH6P52701 1360 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 HSP90AB2PQ58FF8 381 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
SF3B2-206ENST00000528302 ABCC4O15439 1325 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
SF3B2-206ENST00000528302 NEO1Q92859 1461 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 UQCRHLA0A096LP55 91 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 UQCRHP07919 91 aa12.05□□□□□ -0.48
SF3B2-206ENST00000528302 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
SF3B2-206ENST00000528302 METP08581 1390 aa12.04□□□□□ -0.48
SF3B2-206ENST00000528302 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-206ENST00000528302 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
SF3B2-206ENST00000528302 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-206ENST00000528302 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
SF3B2-206ENST00000528302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
SF3B2-206ENST00000528302 ERC2O15083 957 aa12.03□□□□□ -0.48
SF3B2-206ENST00000528302 ZC3H13Q5T200 1668 aaKnown RBP12.03□□□□□ -0.48
SF3B2-206ENST00000528302 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
SF3B2-206ENST00000528302 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
SF3B2-206ENST00000528302 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
SF3B2-206ENST00000528302 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
SF3B2-206ENST00000528302 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
SF3B2-206ENST00000528302 REC8O95072 547 aa12.02□□□□□ -0.48
SF3B2-206ENST00000528302 CPA1P15085 419 aa12.02□□□□□ -0.48
SF3B2-206ENST00000528302 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.48
SF3B2-206ENST00000528302 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.48
SF3B2-206ENST00000528302 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.49
SF3B2-206ENST00000528302 CFAP74Q9C0B2 1584 aa12.02□□□□□ -0.49
SF3B2-206ENST00000528302 WASLO00401 505 aaPredicted RBP12.02□□□□□ -0.49
SF3B2-206ENST00000528302 UNC5CLQ8IV45 518 aa12.02□□□□□ -0.49
SF3B2-206ENST00000528302 PPP1R9BQ96SB3 815 aa12.02□□□□□ -0.49
SF3B2-206ENST00000528302 PTPRMP28827 1452 aa12.02□□□□□ -0.49
SF3B2-206ENST00000528302 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
SF3B2-206ENST00000528302 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-206ENST00000528302 COL3A1P02461 1466 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-206ENST00000528302 PDE1AP54750 535 aa12.01□□□□□ -0.49
SF3B2-206ENST00000528302 PNMA6EA0A0J9YXQ4 647 aa12.01□□□□□ -0.49
SF3B2-206ENST00000528302 A0A0U1RQG5 324 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-206ENST00000528302 OFD1O75665 1012 aa12.01□□□□□ -0.49
SF3B2-206ENST00000528302 PTMSP20962 102 aa12.01□□□□□ -0.49
SF3B2-206ENST00000528302 EIF4A2Q14240 407 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms