RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-209ENST00000528230 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-209ENST00000528230 MEGF6O75095 1541 aa16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 USHBP1Q8N6Y0 703 aa16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 NUP188Q5SRE5 1749 aa16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
TRAPPC4-209ENST00000528230 KCNQ2O43526 872 aa16.54■□□□□ 0.24
TRAPPC4-209ENST00000528230 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
TRAPPC4-209ENST00000528230 EYA1Q99502 592 aa16.53■□□□□ 0.24
TRAPPC4-209ENST00000528230 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.24
TRAPPC4-209ENST00000528230 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-209ENST00000528230 PROM2Q8N271 834 aa16.51■□□□□ 0.23
TRAPPC4-209ENST00000528230 BTAF1O14981 1849 aa16.51■□□□□ 0.23
TRAPPC4-209ENST00000528230 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
TRAPPC4-209ENST00000528230 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC4-209ENST00000528230 R3HDM1Q15032 1099 aaKnown RBP16.5■□□□□ 0.23
TRAPPC4-209ENST00000528230 PCDH11XQ9BZA7 1347 aa16.49■□□□□ 0.23
TRAPPC4-209ENST00000528230 PCDH11YQ9BZA8 1340 aa16.49■□□□□ 0.23
TRAPPC4-209ENST00000528230 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
TRAPPC4-209ENST00000528230 PKD1L3Q7Z443 1732 aa16.49■□□□□ 0.23
TRAPPC4-209ENST00000528230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRAPPC4-209ENST00000528230 PLEKHG2Q9H7P9 1386 aa16.49■□□□□ 0.23
TRAPPC4-209ENST00000528230 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
TRAPPC4-209ENST00000528230 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-209ENST00000528230 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
TRAPPC4-209ENST00000528230 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
TRAPPC4-209ENST00000528230 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-209ENST00000528230 LRP5O75197 1615 aa16.45■□□□□ 0.22
TRAPPC4-209ENST00000528230 CYP27B1O15528 508 aa16.45■□□□□ 0.22
TRAPPC4-209ENST00000528230 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-209ENST00000528230 MTHFSP49914 203 aa16.44■□□□□ 0.22
TRAPPC4-209ENST00000528230 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC4-209ENST00000528230 IL13P35225 146 aa16.43■□□□□ 0.22
TRAPPC4-209ENST00000528230 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
TRAPPC4-209ENST00000528230 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
TRAPPC4-209ENST00000528230 ITGB4P16144 1822 aa16.42■□□□□ 0.22
TRAPPC4-209ENST00000528230 LY75O60449 1722 aa16.42■□□□□ 0.22
TRAPPC4-209ENST00000528230 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-209ENST00000528230 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
TRAPPC4-209ENST00000528230 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
TRAPPC4-209ENST00000528230 AMOTQ4VCS5 1084 aa16.4■□□□□ 0.22
TRAPPC4-209ENST00000528230 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-209ENST00000528230 KDRP35968 1356 aa16.39■□□□□ 0.21
TRAPPC4-209ENST00000528230 PHKG2P15735 406 aa16.39■□□□□ 0.21
TRAPPC4-209ENST00000528230 HMGB2P26583 209 aaKnown RBP16.39■□□□□ 0.21
TRAPPC4-209ENST00000528230 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
TRAPPC4-209ENST00000528230 PAPPAQ13219 1627 aa16.38■□□□□ 0.21
TRAPPC4-209ENST00000528230 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
TRAPPC4-209ENST00000528230 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
TRAPPC4-209ENST00000528230 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
TRAPPC4-209ENST00000528230 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-209ENST00000528230 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-209ENST00000528230 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
TRAPPC4-209ENST00000528230 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
TRAPPC4-209ENST00000528230 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC4-209ENST00000528230 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
TRAPPC4-209ENST00000528230 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
TRAPPC4-209ENST00000528230 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-209ENST00000528230 PIGBQ92521 554 aa16.34■□□□□ 0.21
TRAPPC4-209ENST00000528230 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
TRAPPC4-209ENST00000528230 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
TRAPPC4-209ENST00000528230 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-209ENST00000528230 ERVV-2B6SEH9 535 aa16.33■□□□□ 0.2
TRAPPC4-209ENST00000528230 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC4-209ENST00000528230 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.2
TRAPPC4-209ENST00000528230 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-209ENST00000528230 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
TRAPPC4-209ENST00000528230 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
TRAPPC4-209ENST00000528230 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
TRAPPC4-209ENST00000528230 ZNF827Q17R98 1081 aa16.31■□□□□ 0.2
TRAPPC4-209ENST00000528230 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
TRAPPC4-209ENST00000528230 PDGFDQ9GZP0 370 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC4-209ENST00000528230 HMOX1P09601 288 aa16.3■□□□□ 0.2
TRAPPC4-209ENST00000528230 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
TRAPPC4-209ENST00000528230 KCNQ4P56696 695 aa16.3■□□□□ 0.2
TRAPPC4-209ENST00000528230 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
TRAPPC4-209ENST00000528230 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-209ENST00000528230 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
TRAPPC4-209ENST00000528230 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
TRAPPC4-209ENST00000528230 C5P01031 1676 aa16.29■□□□□ 0.2
TRAPPC4-209ENST00000528230 SLC16A10Q8TF71 515 aa16.28■□□□□ 0.2
TRAPPC4-209ENST00000528230 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
TRAPPC4-209ENST00000528230 TUBGCP6Q96RT7 1819 aa16.28■□□□□ 0.2
TRAPPC4-209ENST00000528230 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-209ENST00000528230 U2SURPO15042 1029 aaKnown RBP16.27■□□□□ 0.2
TRAPPC4-209ENST00000528230 ZBTB7AO95365 584 aa16.27■□□□□ 0.2
TRAPPC4-209ENST00000528230 CABP4P57796 275 aa16.27■□□□□ 0.2
TRAPPC4-209ENST00000528230 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
TRAPPC4-209ENST00000528230 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
TRAPPC4-209ENST00000528230 NUDCQ9Y266 331 aa16.27■□□□□ 0.2
TRAPPC4-209ENST00000528230 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-209ENST00000528230 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
TRAPPC4-209ENST00000528230 SIK1P57059 783 aa16.26■□□□□ 0.19
TRAPPC4-209ENST00000528230 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
TRAPPC4-209ENST00000528230 ZNF831Q5JPB2 1677 aa16.25■□□□□ 0.19
TRAPPC4-209ENST00000528230 PTGER2P43116 358 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms