RNA–Protein interactions for RNA: ENST00000527951.5

PDZD3-208, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-208ENST00000527951 POLD1P28340 1107 aa24.31■■□□□ 1.48
PDZD3-208ENST00000527951 KLHL34Q8N239 644 aa24.3■■□□□ 1.48
PDZD3-208ENST00000527951 PRIM1P49642 420 aaKnown RBP24.29■■□□□ 1.48
PDZD3-208ENST00000527951 LTV1Q96GA3 475 aaPredicted RBP24.29■■□□□ 1.48
PDZD3-208ENST00000527951 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
PDZD3-208ENST00000527951 TERF2IPQ9NYB0 399 aa24.29■■□□□ 1.48
PDZD3-208ENST00000527951 TFCP2L1Q9NZI6 479 aa24.29■■□□□ 1.48
PDZD3-208ENST00000527951 TAF1LQ8IZX4 1826 aa24.28■■□□□ 1.48
PDZD3-208ENST00000527951 C5P01031 1676 aa24.28■■□□□ 1.48
PDZD3-208ENST00000527951 PUS7Q96PZ0 661 aaKnown RBP24.28■■□□□ 1.48
PDZD3-208ENST00000527951 MAP3K19Q56UN5 1328 aa24.28■■□□□ 1.48
PDZD3-208ENST00000527951 CEP350Q5VT06 3117 aa24.28■■□□□ 1.48
PDZD3-208ENST00000527951 HOXC9P31274 260 aa24.26■■□□□ 1.47
PDZD3-208ENST00000527951 SYTL4Q96C24 671 aaPredicted RBP24.26■■□□□ 1.47
PDZD3-208ENST00000527951 GIGYF1O75420 1035 aaPredicted RBP24.25■■□□□ 1.47
PDZD3-208ENST00000527951 YBX3P16989 372 aaKnown RBP eCLIP24.25■■□□□ 1.47
PDZD3-208ENST00000527951 FBLN1P23142 703 aa24.24■■□□□ 1.47
PDZD3-208ENST00000527951 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
PDZD3-208ENST00000527951 ZCRB1Q8TBF4 217 aaKnown RBP24.22■■□□□ 1.47
PDZD3-208ENST00000527951 CCNL1Q9UK58 526 aaPredicted RBP24.22■■□□□ 1.47
PDZD3-208ENST00000527951 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
PDZD3-208ENST00000527951 TESK2Q96S53 571 aa24.21■■□□□ 1.47
PDZD3-208ENST00000527951 RTL1A6NKG5 1358 aa24.2■■□□□ 1.46
PDZD3-208ENST00000527951 TOGARAM1Q9Y4F4 1720 aa24.2■■□□□ 1.46
PDZD3-208ENST00000527951 ITGB4P16144 1822 aa24.19■■□□□ 1.46
PDZD3-208ENST00000527951 COG3Q96JB2 828 aa24.19■■□□□ 1.46
PDZD3-208ENST00000527951 USP47Q96K76 1375 aa24.17■■□□□ 1.46
PDZD3-208ENST00000527951 AMPHP49418 695 aa24.17■■□□□ 1.46
PDZD3-208ENST00000527951 NBPF6Q5VWK0 638 aa24.17■■□□□ 1.46
PDZD3-208ENST00000527951 NBPF4Q96M43 638 aa24.17■■□□□ 1.46
PDZD3-208ENST00000527951 UBR3Q6ZT12 1888 aa24.16■■□□□ 1.46
PDZD3-208ENST00000527951 GRIN3BO60391 1043 aa24.16■■□□□ 1.46
PDZD3-208ENST00000527951 C4BP0C0L5 1744 aa24.15■■□□□ 1.46
PDZD3-208ENST00000527951 KIF20BQ96Q89 1820 aa24.14■■□□□ 1.46
PDZD3-208ENST00000527951 CGNL1Q0VF96 1302 aa24.14■■□□□ 1.46
PDZD3-208ENST00000527951 MSL1Q68DK7 614 aa24.14■■□□□ 1.45
PDZD3-208ENST00000527951 ATP10DQ9P241 1426 aa24.14■■□□□ 1.45
PDZD3-208ENST00000527951 CLSPNQ9HAW4 1339 aa24.13■■□□□ 1.45
PDZD3-208ENST00000527951 PKD1L3Q7Z443 1732 aa24.13■■□□□ 1.45
PDZD3-208ENST00000527951 RRS1Q15050 365 aaKnown RBP24.13■■□□□ 1.45
PDZD3-208ENST00000527951 USHBP1Q8N6Y0 703 aa24.13■■□□□ 1.45
PDZD3-208ENST00000527951 MAP2P11137 1827 aaKnown RBP24.12■■□□□ 1.45
PDZD3-208ENST00000527951 ADCY9O60503 1353 aa24.12■■□□□ 1.45
PDZD3-208ENST00000527951 MSH5O43196 834 aa24.11■■□□□ 1.45
PDZD3-208ENST00000527951 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
PDZD3-208ENST00000527951 PALLDQ8WX93 1383 aa24.09■■□□□ 1.45
PDZD3-208ENST00000527951 CD2APQ9Y5K6 639 aa24.09■■□□□ 1.45
PDZD3-208ENST00000527951 TONSLQ96HA7 1378 aa24.08■■□□□ 1.45
PDZD3-208ENST00000527951 FYB1O15117 783 aa24.08■■□□□ 1.45
PDZD3-208ENST00000527951 IFFO2Q5TF58 517 aa24.08■■□□□ 1.45
PDZD3-208ENST00000527951 AMIGO3Q86WK7 504 aa24.08■■□□□ 1.45
PDZD3-208ENST00000527951 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
PDZD3-208ENST00000527951 INSRP06213 1382 aa24.07■■□□□ 1.44
PDZD3-208ENST00000527951 RAPGEF4Q8WZA2 1011 aa24.07■■□□□ 1.44
PDZD3-208ENST00000527951 PCDH11XQ9BZA7 1347 aa24.07■■□□□ 1.44
PDZD3-208ENST00000527951 PCDH11YQ9BZA8 1340 aa24.07■■□□□ 1.44
PDZD3-208ENST00000527951 ANKRD26Q9UPS8 1709 aa24.05■■□□□ 1.44
PDZD3-208ENST00000527951 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
PDZD3-208ENST00000527951 NCAPD2Q15021 1401 aa24.04■■□□□ 1.44
PDZD3-208ENST00000527951 CYP27B1O15528 508 aa24.04■■□□□ 1.44
PDZD3-208ENST00000527951 TATP17735 454 aaPredicted RBP24.04■■□□□ 1.44
PDZD3-208ENST00000527951 HSP90AB2PQ58FF8 381 aa24.04■■□□□ 1.44
PDZD3-208ENST00000527951 FLAD1Q8NFF5 587 aa24.04■■□□□ 1.44
PDZD3-208ENST00000527951 FLT4P35916 1363 aa24.03■■□□□ 1.44
PDZD3-208ENST00000527951 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
PDZD3-208ENST00000527951 MPRIPQ6WCQ1 1025 aa24.01■■□□□ 1.43
PDZD3-208ENST00000527951 CICQ96RK0 1608 aaPredicted RBP24.01■■□□□ 1.43
PDZD3-208ENST00000527951 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
PDZD3-208ENST00000527951 KIAA1551Q9HCM1 1747 aa24■■□□□ 1.43
PDZD3-208ENST00000527951 KIF13BQ9NQT8 1826 aa24■■□□□ 1.43
PDZD3-208ENST00000527951 SLC24A1O60721 1099 aa23.99■■□□□ 1.43
PDZD3-208ENST00000527951 GPBP1L1Q9HC44 474 aaPredicted RBP23.99■■□□□ 1.43
PDZD3-208ENST00000527951 SMIM5Q71RC9 77 aa23.98■■□□□ 1.43
PDZD3-208ENST00000527951 HMGB2P26583 209 aaKnown RBP23.97■■□□□ 1.43
PDZD3-208ENST00000527951 IGSF1Q8N6C5 1336 aa23.97■■□□□ 1.43
PDZD3-208ENST00000527951 SMARCC1Q92922 1105 aaPredicted RBP23.97■■□□□ 1.43
PDZD3-208ENST00000527951 PIGBQ92521 554 aa23.96■■□□□ 1.43
PDZD3-208ENST00000527951 AK7Q96M32 723 aa23.96■■□□□ 1.43
PDZD3-208ENST00000527951 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
PDZD3-208ENST00000527951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.95■■□□□ 1.42
PDZD3-208ENST00000527951 HSPA6P17066 643 aa23.95■■□□□ 1.42
PDZD3-208ENST00000527951 NKX1-1Q15270 411 aaPredicted RBP23.95■■□□□ 1.42
PDZD3-208ENST00000527951 PHF14O94880 888 aa23.93■■□□□ 1.42
PDZD3-208ENST00000527951 LINC00116Q8NCU8 138 aa23.93■■□□□ 1.42
PDZD3-208ENST00000527951 ZNF526Q8TF50 670 aaPredicted RBP23.93■■□□□ 1.42
PDZD3-208ENST00000527951 SSFA2P28290 1259 aa23.92■■□□□ 1.42
PDZD3-208ENST00000527951 WWC3Q9ULE0 1092 aa23.92■■□□□ 1.42
PDZD3-208ENST00000527951 EMILIN1Q9Y6C2 1016 aa23.92■■□□□ 1.42
PDZD3-208ENST00000527951 N4BP2Q86UW6 1770 aaPredicted RBP23.92■■□□□ 1.42
PDZD3-208ENST00000527951 LOC102724428A0A0B4J2F2 783 aa23.91■■□□□ 1.42
PDZD3-208ENST00000527951 SIK1P57059 783 aa23.91■■□□□ 1.42
PDZD3-208ENST00000527951 TMF1P82094 1093 aa23.91■■□□□ 1.42
PDZD3-208ENST00000527951 BRCA1P38398 1863 aaKnown RBP23.91■■□□□ 1.42
PDZD3-208ENST00000527951 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
PDZD3-208ENST00000527951 KIF3CO14782 793 aa23.89■■□□□ 1.41
PDZD3-208ENST00000527951 ITPK1Q13572 414 aa23.89■■□□□ 1.41
PDZD3-208ENST00000527951 TIMELESSQ9UNS1 1208 aa23.89■■□□□ 1.41
PDZD3-208ENST00000527951 ZNF831Q5JPB2 1677 aa23.89■■□□□ 1.41
PDZD3-208ENST00000527951 PXDNLA1KZ92 1463 aa23.88■■□□□ 1.41
PDZD3-208ENST00000527951 COL5A3P25940 1745 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms